RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 MTMR6Q9Y217 621 aa11.69□□□□□ -0.54
ACTN1-216ENST00000556083 EPN1Q9Y6I3 576 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-216ENST00000556083 CPSF1Q10570 1443 aaKnown RBP11.69□□□□□ -0.54
ACTN1-216ENST00000556083 PRPF3O43395 683 aaKnown RBP11.68□□□□□ -0.54
ACTN1-216ENST00000556083 SLC26A4O43511 780 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 SLC8A1P32418 973 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 ADCY8P40145 1251 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 IREB2P48200 963 aaKnown RBP11.68□□□□□ -0.54
ACTN1-216ENST00000556083 MYO1EQ12965 1108 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 RC3H1Q5TC82 1133 aaKnown RBP11.68□□□□□ -0.54
ACTN1-216ENST00000556083 MIPOL1Q8TD10 442 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 ZNF526Q8TF50 670 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-216ENST00000556083 ARHGEF2Q92974 986 aaKnown RBP11.68□□□□□ -0.54
ACTN1-216ENST00000556083 TTC25Q96NG3 672 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 SERPINA10Q9UK55 444 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 CDK12Q9NYV4 1490 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-216ENST00000556083 DDX39AO00148 427 aaKnown RBP11.68□□□□□ -0.54
ACTN1-216ENST00000556083 NPR1P16066 1061 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 SATB1Q01826 763 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 TCP10Q12799 353 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 ZYXQ15942 572 aaKnown RBP11.68□□□□□ -0.54
ACTN1-216ENST00000556083 DBN1Q16643 649 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 TMEM232C9JQI7 657 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 SLFN14P0C7P3 912 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 BMP3P12645 472 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 PDIA3P30101 505 aaKnown RBP11.68□□□□□ -0.54
ACTN1-216ENST00000556083 SLMAPQ14BN4 828 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 ARHGAP44Q17R89 818 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 HSP90AA5PQ58FG0 334 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 KLHL7Q8IXQ5 586 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 TRIM56Q9BRZ2 755 aaKnown RBP11.68□□□□□ -0.54
ACTN1-216ENST00000556083 ST7Q9NRC1 585 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 NUB1Q9Y5A7 615 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 ZNF500O60304 480 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-216ENST00000556083 AFPP02771 609 aaKnown RBP11.68□□□□□ -0.54
ACTN1-216ENST00000556083 GNAT1P11488 350 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 MYL7Q01449 175 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 KYAT1Q16773 422 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 CTAGE3PQ8IX95 158 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 METTL13Q8N6R0 699 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 CEP120Q8N960 986 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 TDRD7Q8NHU6 1098 aaKnown RBP11.68□□□□□ -0.54
ACTN1-216ENST00000556083 BRIP1Q9BX63 1249 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 THAP9Q9H5L6 903 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 ZNF408Q9H9D4 720 aa11.68□□□□□ -0.54
ACTN1-216ENST00000556083 CARMIL3Q8ND23 1372 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 ESYT2A0FGR8 921 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 PPFIA2O75334 1257 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 DNAJC8O75937 253 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-216ENST00000556083 CYP2J2P51589 502 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 JAK3P52333 1124 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 EIF3BP55884 814 aaKnown RBP11.67□□□□□ -0.54
ACTN1-216ENST00000556083 POMGNT1Q8WZA1 660 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 HEXIM1O94992 359 aaKnown RBP11.67□□□□□ -0.54
ACTN1-216ENST00000556083 PSAPP07602 524 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 IL9RQ01113 521 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 PPP2R5DQ14738 602 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 DCAF4Q8WV16 495 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 TRIM62Q9BVG3 475 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 CNOT10Q9H9A5 744 aaKnown RBP11.67□□□□□ -0.54
ACTN1-216ENST00000556083 LUC7L3O95232 432 aaKnown RBP11.67□□□□□ -0.54
ACTN1-216ENST00000556083 ZSCAN20P17040 1043 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-216ENST00000556083 CIITAP33076 1130 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 TECP42680 631 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 COPB1P53618 953 aaKnown RBP11.67□□□□□ -0.54
ACTN1-216ENST00000556083 IGBP1P78318 339 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 RCSD1Q6JBY9 416 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 SKAP1Q86WV1 359 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 RILPQ96NA2 401 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 ZMYND15Q9H091 742 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 SCINQ9Y6U3 715 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 USP6P35125 1406 aa11.67□□□□□ -0.54
ACTN1-216ENST00000556083 HNRNPDLO14979 420 aaKnown RBP11.66□□□□□ -0.54
ACTN1-216ENST00000556083 ARL4AP40617 200 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 ZNF658Q5TYW1 1059 aaPredicted RBP11.66□□□□□ -0.54
ACTN1-216ENST00000556083 APOA5Q6Q788 366 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 DPP9Q86TI2 863 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 P2RX5Q93086 422 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 CCDC124Q96CT7 223 aaKnown RBP11.66□□□□□ -0.54
ACTN1-216ENST00000556083 USP28Q96RU2 1077 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 NLRC4Q9NPP4 1024 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 MAPK8IP1Q9UQF2 711 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 A2ML1A8K2U0 1454 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 KCNK3O14649 394 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 HIP1RO75146 1068 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 TTC4O95801 387 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 ASNSP08243 561 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 ADD2P35612 726 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 CRKLP46109 303 aaKnown RBP11.66□□□□□ -0.54
ACTN1-216ENST00000556083 TNFAIP2Q03169 654 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 PTGDRQ13258 359 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 FAM47AQ5JRC9 791 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 ENOX1Q8TC92 643 aaKnown RBP11.66□□□□□ -0.54
ACTN1-216ENST00000556083 EFHD1Q9BUP0 239 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 JAG2Q9Y219 1238 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 BCS1LQ9Y276 419 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 SUGT1Q9Y2Z0 365 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 TMEM94Q12767 1356 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 MYO5CQ9NQX4 1742 aa11.66□□□□□ -0.54
ACTN1-216ENST00000556083 PTCH1Q13635 1447 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms