RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 COPS5Q92905 334 aa7.46□□□□□ -1.22
TMEM260-209ENST00000556079 CCDC136Q96JN2 1154 aa7.46□□□□□ -1.22
TMEM260-209ENST00000556079 LBHD1Q9BQE6 289 aaPredicted RBP7.46□□□□□ -1.22
TMEM260-209ENST00000556079 UBAC1Q9BSL1 405 aa7.46□□□□□ -1.22
TMEM260-209ENST00000556079 KRT23Q9C075 422 aa7.46□□□□□ -1.22
TMEM260-209ENST00000556079 LY9Q9HBG7 655 aa7.46□□□□□ -1.22
TMEM260-209ENST00000556079 ANO2Q9NQ90 1003 aa7.46□□□□□ -1.22
TMEM260-209ENST00000556079 CTNNA3Q9UI47 895 aa7.46□□□□□ -1.22
TMEM260-209ENST00000556079 XIRP2A4UGR9 3374 aa7.46□□□□□ -1.22
TMEM260-209ENST00000556079 KIAA1217Q5T5P2 1943 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 CHD9Q3L8U1 2897 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 A0A1W2PQ45 241 aaPredicted RBP7.45□□□□□ -1.22
TMEM260-209ENST00000556079 A0A1W2PQY0 241 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 TRIM43BA6NCK2 446 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 DNM1LO00429 736 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 PRC1O43663 620 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 CYTH3O43739 400 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 DTNBO60941 627 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 ARIH2O95376 493 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 PLEKHA8P1O95397 391 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 PARP1P09874 1014 aaKnown RBP7.45□□□□□ -1.22
TMEM260-209ENST00000556079 RARBP10826 455 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 PCP11498 1178 aaKnown RBP7.45□□□□□ -1.22
TMEM260-209ENST00000556079 HOXA13P31271 388 aaPredicted RBP7.45□□□□□ -1.22
TMEM260-209ENST00000556079 COPB2P35606 906 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 ALDH5A1P51649 535 aaPredicted RBP7.45□□□□□ -1.22
TMEM260-209ENST00000556079 RPS6P62753 249 aaKnown RBP7.45□□□□□ -1.22
TMEM260-209ENST00000556079 GRM4Q14833 912 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 SHHQ15465 462 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 ADCK5Q3MIX3 580 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 BMP2KLQ5H9B9 411 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 TMEM67Q5HYA8 995 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 C9orf50Q5SZB4 431 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 TAPT1Q6NXT6 567 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 SLC39A5Q6ZMH5 540 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 IQCA1Q86XH1 822 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 IL31RAQ8NI17 732 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 IGDCC4Q8TDY8 1250 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 PTCD2Q8WV60 388 aaKnown RBP7.45□□□□□ -1.22
TMEM260-209ENST00000556079 RUFY2Q8WXA3 655 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 TRIM43Q96BQ3 446 aaPredicted RBP7.45□□□□□ -1.22
TMEM260-209ENST00000556079 TTC14Q96N46 770 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 TAAR1Q96RJ0 339 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 PIGSQ96S52 555 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 LARP6Q9BRS8 491 aaKnown RBP7.45□□□□□ -1.22
TMEM260-209ENST00000556079 PRDM5Q9NQX1 630 aaPredicted RBP7.45□□□□□ -1.22
TMEM260-209ENST00000556079 SLC5A4Q9NY91 659 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 FBXO40Q9UH90 709 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 CNPY2Q9Y2B0 182 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 DIS3Q9Y2L1 958 aaKnown RBP7.45□□□□□ -1.22
TMEM260-209ENST00000556079 SYNGAP1Q96PV0 1343 aa7.45□□□□□ -1.22
TMEM260-209ENST00000556079 MYH7BA7E2Y1 1941 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 PALM3A6NDB9 673 aaPredicted RBP7.44□□□□□ -1.22
TMEM260-209ENST00000556079 KBTBD13C9JR72 458 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 KLRF2D3W0D1 207 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 SH2B2O14492 632 aaPredicted RBP7.44□□□□□ -1.22
TMEM260-209ENST00000556079 PQBP1O60828 265 aaKnown RBP7.44□□□□□ -1.22
TMEM260-209ENST00000556079 PPFIA3O75145 1194 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 CDC45O75419 566 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 C6orf222P0C671 652 aaPredicted RBP7.44□□□□□ -1.22
TMEM260-209ENST00000556079 AKR1A1P14550 325 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 ACLYP53396 1101 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 EPHB4P54760 987 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 PSMC6P62333 389 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 TLE2Q04725 743 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 WTAPQ15007 396 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 NECTIN1Q15223 517 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 KCNA10Q16322 511 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 TKFCQ3LXA3 575 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 PPP4R3BQ5MIZ7 849 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 ZNF697Q5TEC3 545 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 FAM109BQ6ICB4 259 aaPredicted RBP7.44□□□□□ -1.22
TMEM260-209ENST00000556079 CCSAPQ6IQ19 270 aaPredicted RBP7.44□□□□□ -1.22
TMEM260-209ENST00000556079 RNF207Q6ZRF8 634 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 NOL8Q76FK4 1167 aaKnown RBP7.44□□□□□ -1.22
TMEM260-209ENST00000556079 RALYLQ86SE5 291 aaKnown RBP7.44□□□□□ -1.22
TMEM260-209ENST00000556079 KLHDC9Q8NEP7 349 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 NCOA7Q8NI08 942 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 SYTL5Q8TDW5 730 aaPredicted RBP7.44□□□□□ -1.22
TMEM260-209ENST00000556079 NUP133Q8WUM0 1156 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 GPKOWQ92917 476 aaPredicted RBP eCLIP7.44□□□□□ -1.22
TMEM260-209ENST00000556079 CDX2Q99626 313 aaPredicted RBP7.44□□□□□ -1.22
TMEM260-209ENST00000556079 CNNM2Q9H8M5 875 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 PDLIM7Q9NR12 457 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 FAM184BQ9ULE4 1060 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 PHF24Q9UPV7 400 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 TELO2Q9Y4R8 837 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 SCN5AQ14524 2016 aa7.44□□□□□ -1.22
TMEM260-209ENST00000556079 ADAMTS3O15072 1205 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 DYNC1LI2O43237 492 aaPredicted RBP7.43□□□□□ -1.22
TMEM260-209ENST00000556079 MSCO60682 206 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 EIF2AK2P19525 551 aaKnown RBP7.43□□□□□ -1.22
TMEM260-209ENST00000556079 TNFAIP2Q03169 654 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 TROAPQ12815 778 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 ASPRV1Q53RT3 343 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 GPATCH4Q5T3I0 446 aaKnown RBP7.43□□□□□ -1.22
TMEM260-209ENST00000556079 CXCL17Q6UXB2 119 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 KIAA1211Q6ZU35 1233 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 TLK2Q86UE8 772 aa7.43□□□□□ -1.22
TMEM260-209ENST00000556079 FBXO11Q86XK2 927 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms