RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 DUSP11O75319 330 aaKnown RBP7.88□□□□□ -1.15
PSEN1-216ENST00000556066 IGHDP01880 384 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 CLTBP09497 229 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 TOP1P11387 765 aaKnown RBP7.88□□□□□ -1.15
PSEN1-216ENST00000556066 RAG1P15918 1043 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 SDSP20132 328 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 ACLYP53396 1101 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 MFAP1P55081 439 aaKnown RBP7.88□□□□□ -1.15
PSEN1-216ENST00000556066 IRX6P78412 446 aaPredicted RBP7.88□□□□□ -1.15
PSEN1-216ENST00000556066 AAMPQ13685 434 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 SHHQ15465 462 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 TKFCQ3LXA3 575 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 MUM1L1Q5H9M0 696 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 GNASQ5JWF2 1037 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 TTBK2Q6IQ55 1244 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 CWC27Q6UX04 472 aaKnown RBP7.88□□□□□ -1.15
PSEN1-216ENST00000556066 NSMFQ6X4W1 530 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 MFSD6Q6ZSS7 791 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 PACS2Q86VP3 889 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 PLEKHM2Q8IWE5 1019 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 SMC5Q8IY18 1101 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 NUP133Q8WUM0 1156 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 DCAF4Q8WV16 495 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 TRIM43Q96BQ3 446 aaPredicted RBP7.88□□□□□ -1.15
PSEN1-216ENST00000556066 FGD4Q96M96 766 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 FAM161BQ96MY7 647 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 REPIN1Q9BWE0 567 aaKnown RBP7.88□□□□□ -1.15
PSEN1-216ENST00000556066 A1CFQ9NQ94 594 aaKnown RBP7.88□□□□□ -1.15
PSEN1-216ENST00000556066 DIAPH3Q9NSV4 1193 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 TMEM39AQ9NV64 488 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 SEPT9Q9UHD8 586 aaPredicted RBP7.88□□□□□ -1.15
PSEN1-216ENST00000556066 DDX49Q9Y6V7 483 aaKnown RBP7.88□□□□□ -1.15
PSEN1-216ENST00000556066 MYO9BQ13459 2157 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 LRRC37A2A6NM11 1700 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 EYSQ5T1H1 3165 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 MOXD2PA6NHM9 499 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 ASB14A6NK59 587 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 DCDC2CA8MYV0 355 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 C3orf80F5H4A9 247 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 ADCY6O43306 1168 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 PLA2G6O60733 806 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 ASGR1P07306 291 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 FGRP09769 529 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 PDIA4P13667 645 aaKnown RBP7.87□□□□□ -1.15
PSEN1-216ENST00000556066 CLCN1P35523 988 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 NUCB1Q02818 461 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 TNFAIP2Q03169 654 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 C9orf50Q5SZB4 431 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 AKNAD1Q5T1N1 836 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 SYDE2Q5VT97 1194 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 C1orf53Q5VUE5 145 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 ZNF787Q6DD87 383 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 FAM109BQ6ICB4 259 aaPredicted RBP7.87□□□□□ -1.15
PSEN1-216ENST00000556066 NUDT18Q6ZVK8 323 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 EEPD1Q7L9B9 569 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 TBC1D10CQ8IV04 446 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 FAM133AQ8N9E0 248 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 PCSK9Q8NBP7 692 aaKnown RBP7.87□□□□□ -1.15
PSEN1-216ENST00000556066 KLHDC9Q8NEP7 349 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 TATDN2Q93075 761 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 GLT1D1Q96MS3 346 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 TMEM47Q9BQJ4 181 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 ZKSCAN3Q9BRR0 538 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 TSEN34Q9BSV6 310 aaKnown RBP7.87□□□□□ -1.15
PSEN1-216ENST00000556066 PRKD2Q9BZL6 878 aa7.87□□□□□ -1.15
PSEN1-216ENST00000556066 PIEZO1Q92508 2521 aa7.86□□□□□ -1.15
PSEN1-216ENST00000556066 ZMYM6O95789 1325 aa7.86□□□□□ -1.15
PSEN1-216ENST00000556066 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.86□□□□□ -1.15
PSEN1-216ENST00000556066 PTPDC1A2A3K4 754 aa7.86□□□□□ -1.15
PSEN1-216ENST00000556066 ZNF213O14771 459 aa7.86□□□□□ -1.15
PSEN1-216ENST00000556066 ICAM1P05362 532 aa7.86□□□□□ -1.15
PSEN1-216ENST00000556066 PDHBP11177 359 aa7.86□□□□□ -1.15
PSEN1-216ENST00000556066 ITGB8P26012 769 aa7.86□□□□□ -1.15
PSEN1-216ENST00000556066 BEX3Q00994 111 aa7.86□□□□□ -1.15
PSEN1-216ENST00000556066 TICAM2Q86XR7 235 aa7.86□□□□□ -1.15
PSEN1-216ENST00000556066 ESR2Q92731 530 aa7.86□□□□□ -1.15
PSEN1-216ENST00000556066 PURBQ96QR8 312 aaKnown RBP7.86□□□□□ -1.15
PSEN1-216ENST00000556066 AP5M1Q9H0R1 490 aa7.86□□□□□ -1.15
PSEN1-216ENST00000556066 RANBP17Q9H2T7 1088 aaKnown RBP7.86□□□□□ -1.15
PSEN1-216ENST00000556066 RNF41Q9H4P4 317 aaPredicted RBP7.86□□□□□ -1.15
PSEN1-216ENST00000556066 TCP11L1Q9NUJ3 509 aa7.86□□□□□ -1.15
PSEN1-216ENST00000556066 CYP39A1Q9NYL5 469 aa7.86□□□□□ -1.15
PSEN1-216ENST00000556066 MUC3AQ02505 3323 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 ASTN1O14525 1302 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 ELP1O95163 1332 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 NEDD4P46934 1319 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 MROH7Q68CQ1 1323 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 NFIBO00712 420 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 KIAA0355O15063 1070 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 DYNC1LI2O43237 492 aaPredicted RBP7.85□□□□□ -1.15
PSEN1-216ENST00000556066 KDM4AO75164 1064 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 PCP11498 1178 aaKnown RBP7.85□□□□□ -1.15
PSEN1-216ENST00000556066 PTGS1P23219 599 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 CALML3P27482 149 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 CST5P28325 142 aaPredicted RBP7.85□□□□□ -1.15
PSEN1-216ENST00000556066 NOVP48745 357 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 GJA9P57773 515 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 FPGSQ05932 587 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 FAAP100Q0VG06 881 aa7.85□□□□□ -1.15
PSEN1-216ENST00000556066 BAATQ14032 418 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms