RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 C5orf67F2Z3F1 127 aa9.78□□□□□ -0.84
PSEN1-215ENST00000556011 DNAJB1P25685 340 aa9.78□□□□□ -0.84
PSEN1-215ENST00000556011 BACE1P56817 501 aa9.78□□□□□ -0.84
PSEN1-215ENST00000556011 RNF43Q68DV7 783 aa9.78□□□□□ -0.84
PSEN1-215ENST00000556011 PHLDB3Q6NSJ2 640 aa9.78□□□□□ -0.84
PSEN1-215ENST00000556011 CNKSR3Q6P9H4 555 aa9.78□□□□□ -0.84
PSEN1-215ENST00000556011 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.78□□□□□ -0.84
PSEN1-215ENST00000556011 TDRD5Q8NAT2 981 aaKnown RBP9.78□□□□□ -0.84
PSEN1-215ENST00000556011 PJA1Q8NG27 643 aa9.78□□□□□ -0.84
PSEN1-215ENST00000556011 ATP8B4Q8TF62 1192 aa9.78□□□□□ -0.84
PSEN1-215ENST00000556011 BCAS3Q9H6U6 928 aa9.78□□□□□ -0.84
PSEN1-215ENST00000556011 A0A087WV48 116 aa9.77□□□□□ -0.85
PSEN1-215ENST00000556011 USP17L5A8MUK1 530 aa9.77□□□□□ -0.85
PSEN1-215ENST00000556011 PER2O15055 1255 aa9.77□□□□□ -0.85
PSEN1-215ENST00000556011 GRNP28799 593 aaKnown RBP9.77□□□□□ -0.85
PSEN1-215ENST00000556011 TNFRSF8P28908 595 aa9.77□□□□□ -0.85
PSEN1-215ENST00000556011 SYCE2Q6PIF2 218 aa9.77□□□□□ -0.85
PSEN1-215ENST00000556011 C15orf52Q6ZUT6 534 aaKnown RBP9.77□□□□□ -0.85
PSEN1-215ENST00000556011 SLF2Q8IX21 1173 aa9.77□□□□□ -0.85
PSEN1-215ENST00000556011 ZNF687Q8N1G0 1237 aa9.77□□□□□ -0.85
PSEN1-215ENST00000556011 YME1L1Q96TA2 773 aa9.77□□□□□ -0.85
PSEN1-215ENST00000556011 SIL1Q9H173 461 aa9.77□□□□□ -0.85
PSEN1-215ENST00000556011 GPR108Q9NPR9 543 aa9.77□□□□□ -0.85
PSEN1-215ENST00000556011 USP40Q9NVE5 1235 aa9.77□□□□□ -0.85
PSEN1-215ENST00000556011 CNPY2Q9Y2B0 182 aa9.77□□□□□ -0.85
PSEN1-215ENST00000556011 PITPNM1O00562 1244 aa9.76□□□□□ -0.85
PSEN1-215ENST00000556011 PDE8AO60658 829 aa9.76□□□□□ -0.85
PSEN1-215ENST00000556011 RB1P06400 928 aa9.76□□□□□ -0.85
PSEN1-215ENST00000556011 SUPT20HL2P0C7V6 817 aa9.76□□□□□ -0.85
PSEN1-215ENST00000556011 ABCG1P45844 678 aa9.76□□□□□ -0.85
PSEN1-215ENST00000556011 PLCD1P51178 756 aa9.76□□□□□ -0.85
PSEN1-215ENST00000556011 MCM10Q7L590 875 aa9.76□□□□□ -0.85
PSEN1-215ENST00000556011 SH3BP5LQ7L8J4 393 aa9.76□□□□□ -0.85
PSEN1-215ENST00000556011 PRICKLE2Q7Z3G6 844 aa9.76□□□□□ -0.85
PSEN1-215ENST00000556011 MYOCDQ8IZQ8 938 aa9.76□□□□□ -0.85
PSEN1-215ENST00000556011 CHCHD4Q8N4Q1 142 aa9.76□□□□□ -0.85
PSEN1-215ENST00000556011 PSMG3-AS1Q96PY0 264 aa9.76□□□□□ -0.85
PSEN1-215ENST00000556011 CARD11Q9BXL7 1154 aa9.76□□□□□ -0.85
PSEN1-215ENST00000556011 TBC1D2Q9BYX2 928 aa9.76□□□□□ -0.85
PSEN1-215ENST00000556011 DNMT3LQ9UJW3 386 aa9.76□□□□□ -0.85
PSEN1-215ENST00000556011 F5H6K3 240 aa9.75□□□□□ -0.85
PSEN1-215ENST00000556011 CABYRO75952 493 aa9.75□□□□□ -0.85
PSEN1-215ENST00000556011 ZNF806P0C7X5 589 aa9.75□□□□□ -0.85
PSEN1-215ENST00000556011 BMPR1AP36894 532 aa9.75□□□□□ -0.85
PSEN1-215ENST00000556011 FGD1P98174 961 aa9.75□□□□□ -0.85
PSEN1-215ENST00000556011 UBE4AQ14139 1066 aa9.75□□□□□ -0.85
PSEN1-215ENST00000556011 SIM2Q14190 667 aaPredicted RBP9.75□□□□□ -0.85
PSEN1-215ENST00000556011 CDC42EP5Q6NZY7 148 aa9.75□□□□□ -0.85
PSEN1-215ENST00000556011 PIAS4Q8N2W9 510 aaPredicted RBP9.75□□□□□ -0.85
PSEN1-215ENST00000556011 MOV10L1Q9BXT6 1211 aaKnown RBP9.75□□□□□ -0.85
PSEN1-215ENST00000556011 SEZ6LQ9BYH1 1024 aa9.75□□□□□ -0.85
PSEN1-215ENST00000556011 KRTAP17-1Q9BYP8 105 aa9.75□□□□□ -0.85
PSEN1-215ENST00000556011 TLE6Q9H808 572 aa9.75□□□□□ -0.85
PSEN1-215ENST00000556011 SALL3Q9BXA9 1300 aa9.75□□□□□ -0.85
PSEN1-215ENST00000556011 FAM196BA6NMK8 535 aa9.74□□□□□ -0.85
PSEN1-215ENST00000556011 C4orf47A7E2U8 309 aa9.74□□□□□ -0.85
PSEN1-215ENST00000556011 TAF5LO75529 589 aa9.74□□□□□ -0.85
PSEN1-215ENST00000556011 SRFP11831 508 aa9.74□□□□□ -0.85
PSEN1-215ENST00000556011 TECP42680 631 aa9.74□□□□□ -0.85
PSEN1-215ENST00000556011 IKBKEQ14164 716 aa9.74□□□□□ -0.85
PSEN1-215ENST00000556011 ANKRD54Q6NXT1 300 aa9.74□□□□□ -0.85
PSEN1-215ENST00000556011 KANK3Q6NY19 840 aa9.74□□□□□ -0.85
PSEN1-215ENST00000556011 FMNL3Q8IVF7 1028 aa9.74□□□□□ -0.85
PSEN1-215ENST00000556011 MMP21Q8N119 569 aa9.74□□□□□ -0.85
PSEN1-215ENST00000556011 PLCD3Q8N3E9 789 aa9.74□□□□□ -0.85
PSEN1-215ENST00000556011 BCO2Q9BYV7 579 aa9.74□□□□□ -0.85
PSEN1-215ENST00000556011 SMOC1Q9H4F8 434 aa9.74□□□□□ -0.85
PSEN1-215ENST00000556011 ZHX1Q9UKY1 873 aaPredicted RBP9.74□□□□□ -0.85
PSEN1-215ENST00000556011 AKAP9Q99996 3911 aa9.73□□□□□ -0.85
PSEN1-215ENST00000556011 SHISA7A6NL88 538 aa9.73□□□□□ -0.85
PSEN1-215ENST00000556011 DIAPH2O60879 1101 aa9.73□□□□□ -0.85
PSEN1-215ENST00000556011 MYF5P13349 255 aa9.73□□□□□ -0.85
PSEN1-215ENST00000556011 KRT10P13645 584 aa9.73□□□□□ -0.85
PSEN1-215ENST00000556011 ERCC3P19447 782 aa9.73□□□□□ -0.85
PSEN1-215ENST00000556011 CHRNDQ07001 517 aa9.73□□□□□ -0.85
PSEN1-215ENST00000556011 ZSCAN29Q8IWY8 852 aaPredicted RBP9.73□□□□□ -0.85
PSEN1-215ENST00000556011 L3MBTL2Q969R5 705 aa9.73□□□□□ -0.85
PSEN1-215ENST00000556011 ARRDC1-AS1Q9H2J1 176 aa9.73□□□□□ -0.85
PSEN1-215ENST00000556011 GREM2Q9H772 168 aa9.73□□□□□ -0.85
PSEN1-215ENST00000556011 KCNK12Q9HB15 430 aa9.73□□□□□ -0.85
PSEN1-215ENST00000556011 AS3MTQ9HBK9 375 aa9.73□□□□□ -0.85
PSEN1-215ENST00000556011 FRMPD4Q14CM0 1322 aa9.73□□□□□ -0.85
PSEN1-215ENST00000556011 ASCC3Q8N3C0 2202 aaKnown RBP9.72□□□□□ -0.85
PSEN1-215ENST00000556011 DDTLA6NHG4 134 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-215ENST00000556011 LGR5O75473 907 aa9.72□□□□□ -0.85
PSEN1-215ENST00000556011 PGK2P07205 417 aa9.72□□□□□ -0.85
PSEN1-215ENST00000556011 LINC00271P0C7V0 271 aa9.72□□□□□ -0.85
PSEN1-215ENST00000556011 HSP90B1P14625 803 aaKnown RBP9.72□□□□□ -0.85
PSEN1-215ENST00000556011 CSRP1P21291 193 aaKnown RBP9.72□□□□□ -0.85
PSEN1-215ENST00000556011 ITPKBP27987 946 aa9.72□□□□□ -0.85
PSEN1-215ENST00000556011 ZC3H18Q86VM9 953 aaKnown RBP9.72□□□□□ -0.85
PSEN1-215ENST00000556011 DEFB124Q8NES8 71 aa9.72□□□□□ -0.85
PSEN1-215ENST00000556011 FCRL3Q96P31 734 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-215ENST00000556011 MYD88Q99836 296 aa9.72□□□□□ -0.85
PSEN1-215ENST00000556011 MRIQ9BWK5 157 aa9.72□□□□□ -0.85
PSEN1-215ENST00000556011 FAM126AQ9BYI3 521 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-215ENST00000556011 CYP26B1Q9NR63 512 aa9.72□□□□□ -0.85
PSEN1-215ENST00000556011 PLAGL2Q9UPG8 496 aa9.72□□□□□ -0.85
PSEN1-215ENST00000556011 MCM3APO60318 1980 aa9.72□□□□□ -0.85
PSEN1-215ENST00000556011 JMJD1CQ15652 2540 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms