RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 KIF2CQ99661 725 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 UBAC1Q9BSL1 405 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 UPF2Q9HAU5 1272 aaKnown RBP4.53□□□□□ -1.68
LINC00648-202ENST00000555985 HMX1Q9NP08 348 aaPredicted RBP4.53□□□□□ -1.68
LINC00648-202ENST00000555985 CNTNAP5Q8WYK1 1306 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 TANC1Q9C0D5 1861 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 SCN10AQ9Y5Y9 1956 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 KLRF2D3W0D1 207 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 IFIT3O14879 490 aaKnown RBP4.53□□□□□ -1.68
LINC00648-202ENST00000555985 KRT32Q14532 448 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 TMEM67Q5HYA8 995 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 TAF3Q5VWG9 929 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 TMTC3Q6ZXV5 915 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 TEX2Q8IWB9 1127 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 DNERQ8NFT8 737 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 DIS3LQ8TF46 1054 aaKnown RBP4.53□□□□□ -1.68
LINC00648-202ENST00000555985 SLC39A7Q92504 469 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 PURBQ96QR8 312 aaKnown RBP4.53□□□□□ -1.68
LINC00648-202ENST00000555985 ARID3AQ99856 593 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 LZTS2Q9BRK4 669 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 UBA5Q9GZZ9 404 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 RNF208Q9H0X6 261 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 CCPG1Q9ULG6 757 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 PNMA6FA0A0J9YX94 578 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 DNM1LO00429 736 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 MSCO60682 206 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 REC8O95072 547 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 PLEKHA8P1O95397 391 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 HOXD8P13378 290 aaPredicted RBP4.52□□□□□ -1.69
LINC00648-202ENST00000555985 ALDH5A1P51649 535 aaPredicted RBP4.52□□□□□ -1.69
LINC00648-202ENST00000555985 ANAPC15P60006 121 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 MLLT1Q03111 559 aaPredicted RBP4.52□□□□□ -1.69
LINC00648-202ENST00000555985 TRDNQ13061 729 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 PLS1Q14651 629 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 KCTD2Q14681 263 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 CSPP1Q1MSJ5 1256 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 CCDC96Q2M329 555 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 SKOR2Q2VWA4 1001 aaPredicted RBP4.52□□□□□ -1.69
LINC00648-202ENST00000555985 RNF20Q5VTR2 975 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 MFSD14CQ5VZR4 134 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 CCDC174Q6PII3 467 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 CASC1Q6TDU7 716 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 RUFY3Q7L099 469 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 ARMCX2Q7L311 632 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 CCDC144CPQ8IYA2 1237 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 SLC43A3Q8NBI5 491 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 SYTL5Q8TDW5 730 aaPredicted RBP4.52□□□□□ -1.69
LINC00648-202ENST00000555985 CRYGNQ8WXF5 182 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 TBC1D5Q92609 795 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 DEFB118Q96PH6 123 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.52□□□□□ -1.69
LINC00648-202ENST00000555985 NOL7Q9UMY1 257 aaKnown RBP4.52□□□□□ -1.69
LINC00648-202ENST00000555985 PHF24Q9UPV7 400 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 Q9Y3F1 56 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 IVNS1ABPQ9Y6Y0 642 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 SYNRGQ9UMZ2 1314 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 MEIS2O14770 477 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 RGS20O76081 388 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 CALM1P0DP23 149 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 CALM2P0DP24 149 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 CALM3P0DP25 149 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 C7P10643 843 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 CDC27P30260 824 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 NASPP49321 788 aaPredicted RBP4.52□□□□□ -1.69
LINC00648-202ENST00000555985 CLK2P49760 499 aaKnown RBP4.52□□□□□ -1.69
LINC00648-202ENST00000555985 GJA9P57773 515 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 RPS6P62753 249 aaKnown RBP4.52□□□□□ -1.69
LINC00648-202ENST00000555985 PKN1Q16512 942 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 PRAMEF19Q5SWL8 479 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 CCDC62Q6P9F0 684 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 SASS6Q6UVJ0 657 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 RALYLQ86SE5 291 aaKnown RBP4.52□□□□□ -1.69
LINC00648-202ENST00000555985 DPP9Q86TI2 863 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 CPXCR1Q8N123 301 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 FANCBQ8NB91 859 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 PIGSQ96S52 555 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 TSEN34Q9BSV6 310 aaKnown RBP4.52□□□□□ -1.69
LINC00648-202ENST00000555985 TOMM22Q9NS69 142 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 SLC5A4Q9NY91 659 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 DOCK5Q9H7D0 1870 aa4.52□□□□□ -1.69
LINC00648-202ENST00000555985 WDR81Q562E7 1941 aa4.51□□□□□ -1.69
LINC00648-202ENST00000555985 EDIL3O43854 480 aa4.51□□□□□ -1.69
LINC00648-202ENST00000555985 ALAS1P13196 640 aa4.51□□□□□ -1.69
LINC00648-202ENST00000555985 ACVR2BQ13705 512 aa4.51□□□□□ -1.69
LINC00648-202ENST00000555985 BAATQ14032 418 aaPredicted RBP4.51□□□□□ -1.69
LINC00648-202ENST00000555985 SART3Q15020 963 aaKnown RBP4.51□□□□□ -1.69
LINC00648-202ENST00000555985 TMEM63BQ5T3F8 832 aa4.51□□□□□ -1.69
LINC00648-202ENST00000555985 TYW1BQ6NUM6 668 aa4.51□□□□□ -1.69
LINC00648-202ENST00000555985 CATIPQ7Z7H3 387 aa4.51□□□□□ -1.69
LINC00648-202ENST00000555985 EMID1Q96A84 441 aaPredicted RBP4.51□□□□□ -1.69
LINC00648-202ENST00000555985 MYL10Q9BUA6 226 aa4.51□□□□□ -1.69
LINC00648-202ENST00000555985 ABHD16BQ9H3Z7 469 aa4.51□□□□□ -1.69
LINC00648-202ENST00000555985 VTA1Q9NP79 307 aa4.51□□□□□ -1.69
LINC00648-202ENST00000555985 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.51□□□□□ -1.69
LINC00648-202ENST00000555985 DDX49Q9Y6V7 483 aaKnown RBP4.51□□□□□ -1.69
LINC00648-202ENST00000555985 SIP14410 1827 aa4.51□□□□□ -1.69
LINC00648-202ENST00000555985 MYH7BA7E2Y1 1941 aa4.51□□□□□ -1.69
LINC00648-202ENST00000555985 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.51□□□□□ -1.69
LINC00648-202ENST00000555985 MYADML2A6NDP7 307 aa4.51□□□□□ -1.69
LINC00648-202ENST00000555985 ASB14A6NK59 587 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms