RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 ACAD9Q9H845 621 aa10.4□□□□□ -0.74
CHD8-210ENST00000555962 UPF2Q9HAU5 1272 aaKnown RBP10.4□□□□□ -0.74
CHD8-210ENST00000555962 NCOA5Q9HCD5 579 aaKnown RBP10.4□□□□□ -0.74
CHD8-210ENST00000555962 A1CFQ9NQ94 594 aaKnown RBP10.4□□□□□ -0.74
CHD8-210ENST00000555962 RBM28Q9NW13 759 aaKnown RBP10.4□□□□□ -0.74
CHD8-210ENST00000555962 FLRT1Q9NZU1 646 aa10.4□□□□□ -0.74
CHD8-210ENST00000555962 TPCN1Q9ULQ1 816 aa10.4□□□□□ -0.74
CHD8-210ENST00000555962 KIAA1217Q5T5P2 1943 aa10.4□□□□□ -0.74
CHD8-210ENST00000555962 DNAJC25-GNG10A0A024R161 153 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 PNMA6FA0A0J9YX94 578 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 OPLAHO14841 1288 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 LARGE1O95461 756 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 HOXC6P09630 235 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 GRK4P32298 578 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 RGS2P41220 211 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 TRIM32Q13049 653 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 STK3Q13188 491 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 NTRK3Q16288 839 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 ZNF792Q3KQV3 632 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 NOL8Q76FK4 1167 aaKnown RBP10.39□□□□□ -0.75
CHD8-210ENST00000555962 DPP9Q86TI2 863 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 TNS4Q8IZW8 715 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 ANKRD35Q8N283 1001 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 TRIB2Q92519 343 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 TBC1D5Q92609 795 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 ZNF274Q96GC6 653 aaPredicted RBP10.39□□□□□ -0.75
CHD8-210ENST00000555962 FGD4Q96M96 766 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 APBA2Q99767 749 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 AMNQ9BXJ7 453 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 FBXO40Q9UH90 709 aa10.39□□□□□ -0.75
CHD8-210ENST00000555962 ABCB11O95342 1321 aa10.38□□□□□ -0.75
CHD8-210ENST00000555962 BRCA2P51587 3418 aa10.38□□□□□ -0.75
CHD8-210ENST00000555962 PPFIA3O75145 1194 aa10.38□□□□□ -0.75
CHD8-210ENST00000555962 IGHA2P01877 340 aa10.38□□□□□ -0.75
CHD8-210ENST00000555962 XRCC5P13010 732 aaKnown RBP10.38□□□□□ -0.75
CHD8-210ENST00000555962 PPP2R5BQ15173 497 aa10.38□□□□□ -0.75
CHD8-210ENST00000555962 SLC9C1Q4G0N8 1177 aa10.38□□□□□ -0.75
CHD8-210ENST00000555962 ARSIQ5FYB1 569 aa10.38□□□□□ -0.75
CHD8-210ENST00000555962 NSMFQ6X4W1 530 aa10.38□□□□□ -0.75
CHD8-210ENST00000555962 SLC30A10Q6XR72 485 aa10.38□□□□□ -0.75
CHD8-210ENST00000555962 KHSRPQ92945 711 aaKnown RBP eCLIP10.38□□□□□ -0.751e-9■■■□□ 16.6
CHD8-210ENST00000555962 RRP36Q96EU6 259 aaKnown RBP10.38□□□□□ -0.75
CHD8-210ENST00000555962 POM121Q96HA1 1249 aa10.38□□□□□ -0.75
CHD8-210ENST00000555962 PURBQ96QR8 312 aaKnown RBP10.38□□□□□ -0.75
CHD8-210ENST00000555962 PNMA2Q9UL42 364 aa10.38□□□□□ -0.75
CHD8-210ENST00000555962 ASTN1O14525 1302 aa10.37□□□□□ -0.75
CHD8-210ENST00000555962 MYH7BA7E2Y1 1941 aa10.37□□□□□ -0.75
CHD8-210ENST00000555962 SOWAHBA6NEL2 793 aa10.37□□□□□ -0.75
CHD8-210ENST00000555962 PFKFB2O60825 505 aa10.37□□□□□ -0.75
CHD8-210ENST00000555962 DTNBO60941 627 aa10.37□□□□□ -0.75
CHD8-210ENST00000555962 RPS6P62753 249 aaKnown RBP10.37□□□□□ -0.75
CHD8-210ENST00000555962 CNTN2Q02246 1040 aa10.37□□□□□ -0.75
CHD8-210ENST00000555962 SCRN1Q12765 414 aa10.37□□□□□ -0.75
CHD8-210ENST00000555962 BAATQ14032 418 aaPredicted RBP10.37□□□□□ -0.75
CHD8-210ENST00000555962 ANKRD1Q15327 319 aa10.37□□□□□ -0.75
CHD8-210ENST00000555962 ME3Q16798 604 aa10.37□□□□□ -0.75
CHD8-210ENST00000555962 FAM133AQ8N9E0 248 aa10.37□□□□□ -0.75
CHD8-210ENST00000555962 GPKOWQ92917 476 aaPredicted RBP eCLIP10.37□□□□□ -0.75
CHD8-210ENST00000555962 PHKBQ93100 1093 aa10.37□□□□□ -0.75
CHD8-210ENST00000555962 ARMC5Q96C12 935 aa10.37□□□□□ -0.75
CHD8-210ENST00000555962 DDX11Q96FC9 970 aa10.37□□□□□ -0.75
CHD8-210ENST00000555962 ABHD8Q96I13 439 aa10.37□□□□□ -0.75
CHD8-210ENST00000555962 MAML3Q96JK9 1138 aa10.37□□□□□ -0.75
CHD8-210ENST00000555962 ZNF333Q96JL9 665 aa10.37□□□□□ -0.75
CHD8-210ENST00000555962 CYP39A1Q9NYL5 469 aa10.37□□□□□ -0.75
CHD8-210ENST00000555962 PCDHA1Q9Y5I3 950 aa10.37□□□□□ -0.75
CHD8-210ENST00000555962 DDX49Q9Y6V7 483 aaKnown RBP10.37□□□□□ -0.75
CHD8-210ENST00000555962 V9GY48 417 aaPredicted RBP10.37□□□□□ -0.75
CHD8-210ENST00000555962 PFASO15067 1338 aa10.36□□□□□ -0.75
CHD8-210ENST00000555962 DOCK5Q9H7D0 1870 aa10.36□□□□□ -0.75
CHD8-210ENST00000555962 CCDC196A0A1B0GTZ2 297 aa10.36□□□□□ -0.75
CHD8-210ENST00000555962 PTPDC1A2A3K4 754 aa10.36□□□□□ -0.75
CHD8-210ENST00000555962 POTEB2H3BUK9 544 aa10.36□□□□□ -0.75
CHD8-210ENST00000555962 MYCP01106 439 aaPredicted RBP10.36□□□□□ -0.75
CHD8-210ENST00000555962 HMGCRP04035 888 aa10.36□□□□□ -0.75
CHD8-210ENST00000555962 INHAP05111 366 aa10.36□□□□□ -0.75
CHD8-210ENST00000555962 IFNAR1P17181 557 aa10.36□□□□□ -0.75
CHD8-210ENST00000555962 CALML3P27482 149 aa10.36□□□□□ -0.75
CHD8-210ENST00000555962 CYP2C19P33261 490 aa10.36□□□□□ -0.75
CHD8-210ENST00000555962 ST3GAL1Q11201 340 aa10.36□□□□□ -0.75
CHD8-210ENST00000555962 RABEP1Q15276 862 aa10.36□□□□□ -0.75
CHD8-210ENST00000555962 MTFR1Q15390 333 aa10.36□□□□□ -0.75
CHD8-210ENST00000555962 PKN1Q16512 942 aa10.36□□□□□ -0.75
CHD8-210ENST00000555962 WWC2Q6AWC2 1192 aa10.36□□□□□ -0.75
CHD8-210ENST00000555962 RNF207Q6ZRF8 634 aa10.36□□□□□ -0.75
CHD8-210ENST00000555962 NECAB1Q8N987 351 aa10.36□□□□□ -0.75
CHD8-210ENST00000555962 RGS22Q8NE09 1264 aa10.36□□□□□ -0.75
CHD8-210ENST00000555962 SLKQ9H2G2 1235 aaPredicted RBP10.36□□□□□ -0.75
CHD8-210ENST00000555962 COL20A1Q9P218 1284 aa10.36□□□□□ -0.75
CHD8-210ENST00000555962 SEC63Q9UGP8 760 aaKnown RBP10.36□□□□□ -0.75
CHD8-210ENST00000555962 DIS3Q9Y2L1 958 aaKnown RBP10.36□□□□□ -0.75
CHD8-210ENST00000555962 MRPL11Q9Y3B7 192 aaKnown RBP10.36□□□□□ -0.75
CHD8-210ENST00000555962 PRPF3O43395 683 aaKnown RBP10.35□□□□□ -0.75
CHD8-210ENST00000555962 CD2BP2O95400 341 aaKnown RBP10.35□□□□□ -0.75
CHD8-210ENST00000555962 CTDNEP1O95476 244 aa10.35□□□□□ -0.75
CHD8-210ENST00000555962 CFBP00751 764 aa10.35□□□□□ -0.75
CHD8-210ENST00000555962 RFC5P40937 340 aa10.35□□□□□ -0.75
CHD8-210ENST00000555962 GHRHRQ02643 423 aa10.35□□□□□ -0.75
CHD8-210ENST00000555962 CACNB2Q08289 660 aaPredicted RBP10.35□□□□□ -0.75
CHD8-210ENST00000555962 MAP3K21Q5TCX8 1036 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms