RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 CARD10Q9BWT7 1032 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 EDEM3Q9BZQ6 932 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 LUC7LQ9NQ29 371 aaKnown RBP8.6□□□□□ -1.03
CHD8-209ENST00000555935 KBTBD4Q9NVX7 518 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 SMARCAL1Q9NZC9 954 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 DDX20Q9UHI6 824 aaKnown RBP8.6□□□□□ -1.03
CHD8-209ENST00000555935 SLC12A6Q9UHW9 1150 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 PLAAQ9Y263 795 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 ABCB11O95342 1321 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 DNAJC8O75937 253 aaPredicted RBP8.6□□□□□ -1.03
CHD8-209ENST00000555935 PLEKHA8P1O95397 391 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 NLRP5P59047 1200 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 AGBL2Q5U5Z8 902 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 LRCH2Q5VUJ6 765 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 CACNA2D3Q8IZS8 1091 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 C4orf32Q8N8J7 132 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 CASKIN2Q8WXE0 1202 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 FAM89AQ96GI7 184 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 FAXDC2Q96IV6 333 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 ZSCAN10Q96SZ4 725 aaPredicted RBP8.6□□□□□ -1.03
CHD8-209ENST00000555935 PSMB7Q99436 277 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 OSBPL7Q9BZF2 842 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 CCSER1Q9C0I3 900 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 PPANQ9NQ55 473 aaKnown RBP8.6□□□□□ -1.03
CHD8-209ENST00000555935 EHD2Q9NZN4 543 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 TPX2Q9ULW0 747 aaKnown RBP8.6□□□□□ -1.03
CHD8-209ENST00000555935 TNS3Q68CZ2 1445 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 MYH13Q9UKX3 1938 aa8.6□□□□□ -1.03
CHD8-209ENST00000555935 RBAK-RBAKDNI3L0D1 243 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 NCK2O43639 380 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 PRKAB2O43741 272 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 MYBP10242 640 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 PCP11498 1178 aaKnown RBP8.59□□□□□ -1.03
CHD8-209ENST00000555935 CALML3P27482 149 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 GUCY2FP51841 1108 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 CUL1Q13616 776 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 IFIT1BQ5T764 474 aaKnown RBP8.59□□□□□ -1.03
CHD8-209ENST00000555935 TLDC1Q6P9B6 456 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 DTHD1Q6ZMT9 781 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 LCORLQ8N3X6 602 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 ENAHQ8N8S7 591 aaPredicted RBP8.59□□□□□ -1.03
CHD8-209ENST00000555935 RASSF8Q8NHQ8 419 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 SEC16BQ96JE7 1060 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 TRIM6Q9C030 488 aaPredicted RBP8.59□□□□□ -1.03
CHD8-209ENST00000555935 KDM4CQ9H3R0 1056 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 TAF1DQ9H5J8 278 aaPredicted RBP8.59□□□□□ -1.03
CHD8-209ENST00000555935 SIK3Q9Y2K2 1263 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 CNTNAP5Q8WYK1 1306 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 DNM1LO00429 736 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 CES2O00748 559 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 MGRN1O60291 552 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 UBA7P41226 1012 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 SCTRP47872 440 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 CLNS1AP54105 237 aaKnown RBP8.59□□□□□ -1.03
CHD8-209ENST00000555935 CTSWP56202 376 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 IRX1P78414 480 aaPredicted RBP8.59□□□□□ -1.03
CHD8-209ENST00000555935 VWA3BQ502W6 1294 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 ANKRD40Q6AI12 368 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 RCSD1Q6JBY9 416 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 EP400NLQ6ZTU2 488 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 FAM228AQ86W67 206 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 HOOK2Q96ED9 719 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 MTMR8Q96EF0 704 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 ISCUQ9H1K1 167 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 HAUS2Q9NVX0 235 aa8.59□□□□□ -1.03
CHD8-209ENST00000555935 KCPQ6ZWJ8 1503 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 TRPM3Q9HCF6 1732 aaPredicted RBP8.58□□□□□ -1.04
CHD8-209ENST00000555935 MYH6P13533 1939 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 ESYT3A0FGR9 886 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 CSB-PGBD3P0DP91 1061 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 PDHBP11177 359 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 SCG2P13521 617 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 FGFR2P21802 821 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 HPDP32754 393 aaPredicted RBP8.58□□□□□ -1.04
CHD8-209ENST00000555935 TROAPQ12815 778 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 MTMR3Q13615 1198 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 ASTE1Q2TB18 679 aaPredicted RBP8.58□□□□□ -1.04
CHD8-209ENST00000555935 GKAP1Q5VSY0 366 aaPredicted RBP8.58□□□□□ -1.04
CHD8-209ENST00000555935 KIF6Q6ZMV9 814 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 MS4A14Q96JA4 679 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 SCLT1Q96NL6 688 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 KRT12Q99456 494 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 NUCKS1Q9H1E3 243 aaKnown RBP8.58□□□□□ -1.04
CHD8-209ENST00000555935 GREM2Q9H772 168 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 BATF3Q9NR55 127 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 SWAP70Q9UH65 585 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 LEMD3Q9Y2U8 911 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 MROH5Q6ZUA9 1318 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 RGPD5Q99666 1765 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 hCG_1642624A0A1W2PR95 340 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 ERVV-2B6SEH9 535 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 LAD1O00515 517 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 RTN2O75298 545 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 FGFR1OPO95684 399 aaKnown RBP8.58□□□□□ -1.04
CHD8-209ENST00000555935 SLC5A1P13866 664 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 HSD17B3P37058 310 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 ZC3H6P61129 1189 aaKnown RBP8.58□□□□□ -1.04
CHD8-209ENST00000555935 PPP2R2AP63151 447 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 ATP2B2Q01814 1243 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 PFKFB3Q16875 520 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms