RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 SHCBP1Q8NEM2 672 aa8.71□□□□□ -1.02
PCNX4-211ENST00000555929 CCDC148Q8NFR7 591 aa8.71□□□□□ -1.02
PCNX4-211ENST00000555929 ZNF296Q8WUU4 475 aaPredicted RBP8.71□□□□□ -1.02
PCNX4-211ENST00000555929 INTS4Q96HW7 963 aaKnown RBP8.71□□□□□ -1.02
PCNX4-211ENST00000555929 BIN2Q9UBW5 565 aaPredicted RBP8.71□□□□□ -1.02
PCNX4-211ENST00000555929 STK36Q9NRP7 1315 aa8.71□□□□□ -1.02
PCNX4-211ENST00000555929 FOXN1O15353 648 aa8.7□□□□□ -1.02
PCNX4-211ENST00000555929 HSPA1AP0DMV8 641 aaKnown RBP8.7□□□□□ -1.02
PCNX4-211ENST00000555929 HSPA1BP0DMV9 641 aaKnown RBP8.7□□□□□ -1.02
PCNX4-211ENST00000555929 GNA11P29992 359 aa8.7□□□□□ -1.02
PCNX4-211ENST00000555929 MRPL12P52815 198 aaKnown RBP8.7□□□□□ -1.02
PCNX4-211ENST00000555929 LACTBP83111 547 aaPredicted RBP8.7□□□□□ -1.02
PCNX4-211ENST00000555929 SAFBQ15424 915 aaKnown RBP eCLIP8.7□□□□□ -1.02
PCNX4-211ENST00000555929 FOXD4L5Q5VV16 416 aaPredicted RBP8.7□□□□□ -1.02
PCNX4-211ENST00000555929 JAKMIP3Q5VZ66 844 aa8.7□□□□□ -1.02
PCNX4-211ENST00000555929 KRT40Q6A162 431 aa8.7□□□□□ -1.02
PCNX4-211ENST00000555929 JMYQ8N9B5 988 aa8.7□□□□□ -1.02
PCNX4-211ENST00000555929 CLEC4DQ8WXI8 215 aa8.7□□□□□ -1.02
PCNX4-211ENST00000555929 FOXD4L4Q8WXT5 416 aaPredicted RBP8.7□□□□□ -1.02
PCNX4-211ENST00000555929 ERO1AQ96HE7 468 aa8.7□□□□□ -1.02
PCNX4-211ENST00000555929 CFHR5Q9BXR6 569 aa8.7□□□□□ -1.02
PCNX4-211ENST00000555929 BRMS1Q9HCU9 246 aa8.7□□□□□ -1.02
PCNX4-211ENST00000555929 SH3GLB2Q9NR46 395 aa8.7□□□□□ -1.02
PCNX4-211ENST00000555929 LOC285556D6RIA3 1793 aa8.7□□□□□ -1.02
PCNX4-211ENST00000555929 SLC15A5A6NIM6 579 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 STRNO43815 780 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 CYP2B6P20813 491 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 PDCP20941 246 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 PTPREP23469 700 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 HOXD10P28358 340 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 ADORA2AP29274 412 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 CTGFP29279 349 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 LBX1P52954 281 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 RPS6P62753 249 aaKnown RBP8.69□□□□□ -1.02
PCNX4-211ENST00000555929 UBXN2AP68543 259 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 CNTN2Q02246 1040 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 DSG2Q14126 1118 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 ARHGEF6Q15052 776 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 PPP1R18Q6NYC8 613 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 SLC30A10Q6XR72 485 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 BLIDQ8IZY5 108 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 BICD2Q8TD16 824 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 RASGRP4Q8TDF6 673 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 SHISA4Q96DD7 197 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 PGBD1Q96JS3 809 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 TRIM47Q96LD4 638 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 PURBQ96QR8 312 aaKnown RBP8.69□□□□□ -1.02
PCNX4-211ENST00000555929 NUDT12Q9BQG2 462 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 GLT8D2Q9H1C3 349 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 RIC8AQ9NPQ8 531 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 A1CFQ9NQ94 594 aaKnown RBP8.69□□□□□ -1.02
PCNX4-211ENST00000555929 TMEM260Q9NX78 707 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 CYP39A1Q9NYL5 469 aa8.69□□□□□ -1.02
PCNX4-211ENST00000555929 SPDYE3A6NKU9 549 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 BTBD18B2RXH4 712 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 OPLAHO14841 1288 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 ADAMTS3O15072 1205 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 EIF2AK2P19525 551 aaKnown RBP8.68□□□□□ -1.02
PCNX4-211ENST00000555929 ATP2B1P20020 1258 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 SYT1P21579 422 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 KRT2P35908 639 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 CTCFP49711 727 aaPredicted RBP8.68□□□□□ -1.02
PCNX4-211ENST00000555929 ARHGEF16Q5VV41 709 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 ADGRD1Q6QNK2 874 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 DIS3L2Q8IYB7 885 aaKnown RBP8.68□□□□□ -1.02
PCNX4-211ENST00000555929 REXO1Q8N1G1 1221 aaKnown RBP8.68□□□□□ -1.02
PCNX4-211ENST00000555929 RGS22Q8NE09 1264 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 FBXO18Q8NFZ0 1043 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 OXER1Q8TDS5 423 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 SYTL5Q8TDW5 730 aaPredicted RBP8.68□□□□□ -1.02
PCNX4-211ENST00000555929 IPO9Q96P70 1041 aaKnown RBP8.68□□□□□ -1.02
PCNX4-211ENST00000555929 TAAR1Q96RJ0 339 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 PHF20Q9BVI0 1012 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 ZMYND12Q9H0C1 365 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 SLC5A4Q9NY91 659 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 PCDHA4Q9UN74 947 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 GABRQQ9UN88 632 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 TRIM17Q9Y577 477 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 PFASO15067 1338 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 PTPRFP10586 1907 aa8.68□□□□□ -1.02
PCNX4-211ENST00000555929 BAZ2BQ9UIF8 2168 aaKnown RBP8.68□□□□□ -1.02
PCNX4-211ENST00000555929 CCDC194A0A1B0GVG4 234 aa8.67□□□□□ -1.02
PCNX4-211ENST00000555929 MEIS2O14770 477 aa8.67□□□□□ -1.02
PCNX4-211ENST00000555929 STX6O43752 255 aa8.67□□□□□ -1.02
PCNX4-211ENST00000555929 COBLO75128 1261 aa8.67□□□□□ -1.02
PCNX4-211ENST00000555929 MMP1P03956 469 aa8.67□□□□□ -1.02
PCNX4-211ENST00000555929 HSPA8P11142 646 aaKnown RBP8.67□□□□□ -1.02
PCNX4-211ENST00000555929 MYCLP12524 364 aaPredicted RBP8.67□□□□□ -1.02
PCNX4-211ENST00000555929 RGS2P41220 211 aa8.67□□□□□ -1.02
PCNX4-211ENST00000555929 FLT3LGP49771 235 aa8.67□□□□□ -1.02
PCNX4-211ENST00000555929 HSD17B4P51659 736 aa8.67□□□□□ -1.02
PCNX4-211ENST00000555929 PRKCZQ05513 592 aa8.67□□□□□ -1.02
PCNX4-211ENST00000555929 MAP2K5Q13163 448 aa8.67□□□□□ -1.02
PCNX4-211ENST00000555929 NR5A1Q13285 461 aa8.67□□□□□ -1.02
PCNX4-211ENST00000555929 GRB14Q14449 540 aa8.67□□□□□ -1.02
PCNX4-211ENST00000555929 MORN1Q5T089 497 aa8.67□□□□□ -1.02
PCNX4-211ENST00000555929 GALNT17Q6IS24 598 aa8.67□□□□□ -1.02
PCNX4-211ENST00000555929 PIK3AP1Q6ZUJ8 805 aa8.67□□□□□ -1.02
PCNX4-211ENST00000555929 FERMT3Q86UX7 667 aa8.67□□□□□ -1.02
PCNX4-211ENST00000555929 RAET1EQ8TD07 263 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms