RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 SRGNP10124 158 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 CCNE1P24864 410 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 MTIF2P46199 727 aaKnown RBP7.82□□□□□ -1.16
TDP1-213ENST00000555880 KCNQ4P56696 695 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 CKAP4Q07065 602 aaKnown RBP7.82□□□□□ -1.16
TDP1-213ENST00000555880 PDE4DQ08499 809 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 DIXDC1Q155Q3 683 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 LETM2Q2VYF4 491 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 HSP90B2PQ58FF3 399 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 CCDC122Q5T0U0 273 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 TYW1BQ6NUM6 668 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 NEK8Q86SG6 692 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 TXNRD3Q86VQ6 643 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 IRF2BP1Q8IU81 584 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 MAPKAPK5Q8IW41 473 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 SLF2Q8IX21 1173 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 CCDC170Q8IYT3 715 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 P2RX5Q93086 422 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 RPGRIP1Q96KN7 1286 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 RHOXF2Q9BQY4 288 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 EMILIN3Q9NT22 766 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.82□□□□□ -1.16
TDP1-213ENST00000555880 SAP30BPQ9UHR5 308 aaKnown RBP7.82□□□□□ -1.16
TDP1-213ENST00000555880 CDK5RAP2Q96SN8 1893 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 SMCO2A6NFE2 343 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 B4DLN1 442 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 hCG_1984214I3L0E3 225 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 RNF225M0QZC1 329 aaPredicted RBP7.81□□□□□ -1.16
TDP1-213ENST00000555880 CYTH3O43739 400 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 KLRC4O43908 158 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 ONECUT3O60422 494 aaPredicted RBP7.81□□□□□ -1.16
TDP1-213ENST00000555880 EVI5O60447 810 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 FGFR1OPO95684 399 aaKnown RBP7.81□□□□□ -1.16
TDP1-213ENST00000555880 RASA1P20936 1047 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 RFC4P35249 363 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 ZBED6P86452 979 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 TBC1D8BQ0IIM8 1120 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 GRAPQ13588 217 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 MCM6Q14566 821 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 TXNRD1Q16881 649 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 TMEM266Q2M3C6 531 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 MAP9Q49MG5 647 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 TRAPPC3LQ5T215 181 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 IQCEQ6IPM2 695 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 TTI2Q6NXR4 508 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 TEX11Q8IYF3 940 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 REXO1Q8N1G1 1221 aaKnown RBP7.81□□□□□ -1.16
TDP1-213ENST00000555880 CCDC24Q8N4L8 307 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 MSL3Q8N5Y2 521 aaKnown RBP7.81□□□□□ -1.16
TDP1-213ENST00000555880 ZNF713Q8N859 430 aaPredicted RBP7.81□□□□□ -1.16
TDP1-213ENST00000555880 GRAPLQ8TC17 118 aaPredicted RBP7.81□□□□□ -1.16
TDP1-213ENST00000555880 ZNF507Q8TCN5 953 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 JAKMIP2Q96AA8 810 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 CDK5RAP3Q96JB5 506 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 CNOT6LQ96LI5 555 aaKnown RBP7.81□□□□□ -1.16
TDP1-213ENST00000555880 EYA3Q99504 573 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 CHP1Q99653 195 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 C7orf25Q9BPX7 421 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 RAB34Q9BZG1 259 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 TRIM9Q9C026 710 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 TNRC6CQ9HCJ0 1690 aaKnown RBP7.81□□□□□ -1.16
TDP1-213ENST00000555880 BTAF1O14981 1849 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 MAP2K7O14733 419 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 HRO43593 1189 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 GOLGA8HP0CJ92 632 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 SMARCA1P28370 1054 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 HOXA7P31268 230 aaPredicted RBP7.81□□□□□ -1.16
TDP1-213ENST00000555880 PMS1P54277 932 aaKnown RBP7.81□□□□□ -1.16
TDP1-213ENST00000555880 SPA17Q15506 151 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 MEA1Q16626 185 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 BEND6Q5SZJ8 279 aaPredicted RBP7.81□□□□□ -1.16
TDP1-213ENST00000555880 CCDC70Q6NSX1 233 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 ZNF662Q6ZS27 426 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 FAM196AQ6ZSG2 479 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 C16orf86Q6ZW13 317 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 CNBD1Q8NA66 436 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 SLC44A5Q8NCS7 719 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 NEDD1Q8NHV4 660 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 CAGE1Q8TC20 777 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 RPGRQ92834 1020 aaKnown RBP7.81□□□□□ -1.16
TDP1-213ENST00000555880 EXOC4Q96A65 974 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 PNKPQ96T60 521 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 NOC4LQ9BVI4 516 aaKnown RBP7.81□□□□□ -1.16
TDP1-213ENST00000555880 TSGA10Q9BZW7 698 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 LRRC27Q9C0I9 530 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 SAR1BQ9Y6B6 198 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 FLT1P17948 1338 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 IRS2Q9Y4H2 1338 aa7.81□□□□□ -1.16
TDP1-213ENST00000555880 A0A1W2PQJ5 194 aa7.8□□□□□ -1.16
TDP1-213ENST00000555880 ESYT2A0FGR8 921 aa7.8□□□□□ -1.16
TDP1-213ENST00000555880 EIF3CLB5ME19 914 aaKnown RBP7.8□□□□□ -1.16
TDP1-213ENST00000555880 TK2O00142 265 aa7.8□□□□□ -1.16
TDP1-213ENST00000555880 TM4SF1P30408 202 aa7.8□□□□□ -1.16
TDP1-213ENST00000555880 TECP42680 631 aa7.8□□□□□ -1.16
TDP1-213ENST00000555880 BTDP43251 543 aa7.8□□□□□ -1.16
TDP1-213ENST00000555880 CDK8P49336 464 aa7.8□□□□□ -1.16
TDP1-213ENST00000555880 AMPD2Q01433 879 aa7.8□□□□□ -1.16
TDP1-213ENST00000555880 KIF5AQ12840 1032 aa7.8□□□□□ -1.16
TDP1-213ENST00000555880 CALCRLQ16602 461 aa7.8□□□□□ -1.16
TDP1-213ENST00000555880 NCAPH2Q6IBW4 605 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms