RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 RIC8AQ9NPQ8 531 aa18.01■□□□□ 0.47
TUBB3-209ENST00000555609 VPS18Q9P253 973 aa18.01■□□□□ 0.47
TUBB3-209ENST00000555609 TRIM10Q9UDY6 481 aa18.01■□□□□ 0.47
TUBB3-209ENST00000555609 SRP68Q9UHB9 627 aaKnown RBP18.01■□□□□ 0.47
TUBB3-209ENST00000555609 JRKLQ9Y4A0 524 aa18.01■□□□□ 0.47
TUBB3-209ENST00000555609 TACC1O75410 805 aa18.01■□□□□ 0.47
TUBB3-209ENST00000555609 MAN2A1Q16706 1144 aa18.01■□□□□ 0.47
TUBB3-209ENST00000555609 LEKR1Q6ZMV7 388 aa18.01■□□□□ 0.47
TUBB3-209ENST00000555609 TBCKQ8TEA7 893 aa18.01■□□□□ 0.47
TUBB3-209ENST00000555609 PLIN2Q99541 437 aa18.01■□□□□ 0.47
TUBB3-209ENST00000555609 MMTAG2Q9BU76 263 aaKnown RBP18.01■□□□□ 0.47
TUBB3-209ENST00000555609 SNED1Q8TER0 1413 aa18■□□□□ 0.47
TUBB3-209ENST00000555609 PLIN4Q96Q06 1357 aa18■□□□□ 0.47
TUBB3-209ENST00000555609 ATP2B4P23634 1241 aa18■□□□□ 0.47
TUBB3-209ENST00000555609 TECP42680 631 aa18■□□□□ 0.47
TUBB3-209ENST00000555609 LMAN1P49257 510 aa18■□□□□ 0.47
TUBB3-209ENST00000555609 ASPRV1Q53RT3 343 aa18■□□□□ 0.47
TUBB3-209ENST00000555609 PROM2Q8N271 834 aa18■□□□□ 0.47
TUBB3-209ENST00000555609 MMS19Q96T76 1030 aa18■□□□□ 0.47
TUBB3-209ENST00000555609 MYH1P12882 1939 aa18■□□□□ 0.47
TUBB3-209ENST00000555609 IL1R1P14778 569 aa17.99■□□□□ 0.47
TUBB3-209ENST00000555609 MAPKAPK5Q8IW41 473 aa17.99■□□□□ 0.47
TUBB3-209ENST00000555609 TEX11Q8IYF3 940 aa17.99■□□□□ 0.47
TUBB3-209ENST00000555609 MMGT1Q8N4V1 131 aa17.99■□□□□ 0.47
TUBB3-209ENST00000555609 CCDC155Q8N6L0 562 aa17.99■□□□□ 0.47
TUBB3-209ENST00000555609 KIAA0895Q8NCT3 520 aa17.99■□□□□ 0.47
TUBB3-209ENST00000555609 NUCKS1Q9H1E3 243 aaKnown RBP17.99■□□□□ 0.47
TUBB3-209ENST00000555609 SEMA6BQ9H3T3 888 aa17.99■□□□□ 0.47
TUBB3-209ENST00000555609 LRWD1Q9UFC0 647 aa17.99■□□□□ 0.47
TUBB3-209ENST00000555609 SIK3Q9Y2K2 1263 aa17.99■□□□□ 0.47
TUBB3-209ENST00000555609 GNPATO15228 680 aa17.99■□□□□ 0.47
TUBB3-209ENST00000555609 BTDP43251 543 aa17.99■□□□□ 0.47
TUBB3-209ENST00000555609 DIXDC1Q155Q3 683 aa17.99■□□□□ 0.47
TUBB3-209ENST00000555609 CALCRLQ16602 461 aa17.99■□□□□ 0.47
TUBB3-209ENST00000555609 SLC44A5Q8NCS7 719 aa17.99■□□□□ 0.47
TUBB3-209ENST00000555609 TBC1D22AQ8WUA7 517 aa17.99■□□□□ 0.47
TUBB3-209ENST00000555609 CDK5RAP3Q96JB5 506 aa17.99■□□□□ 0.47
TUBB3-209ENST00000555609 TSG101Q99816 390 aa17.99■□□□□ 0.47
TUBB3-209ENST00000555609 LACRTQ9GZZ8 138 aa17.99■□□□□ 0.47
TUBB3-209ENST00000555609 NDST4Q9H3R1 872 aa17.99■□□□□ 0.47
TUBB3-209ENST00000555609 TNRC6CQ9HCJ0 1690 aaKnown RBP17.98■□□□□ 0.47
TUBB3-209ENST00000555609 ENC1O14682 589 aa17.98■□□□□ 0.47
TUBB3-209ENST00000555609 FCER1AP12319 257 aa17.98■□□□□ 0.47
TUBB3-209ENST00000555609 GRB10Q13322 594 aa17.98■□□□□ 0.47
TUBB3-209ENST00000555609 GOLGA6L1Q8N7Z2 621 aa17.98■□□□□ 0.47
TUBB3-209ENST00000555609 CAGE1Q8TC20 777 aa17.98■□□□□ 0.47
TUBB3-209ENST00000555609 LARP4BQ92615 738 aaKnown RBP17.98■□□□□ 0.47
TUBB3-209ENST00000555609 CCDC102AQ96A19 550 aa17.98■□□□□ 0.47
TUBB3-209ENST00000555609 NAP1L4Q99733 375 aaKnown RBP17.98■□□□□ 0.47
TUBB3-209ENST00000555609 BLOC1S4Q9NUP1 217 aa17.98■□□□□ 0.47
TUBB3-209ENST00000555609 HDAC6Q9UBN7 1215 aa17.98■□□□□ 0.47
TUBB3-209ENST00000555609 JAG2Q9Y219 1238 aa17.98■□□□□ 0.47
TUBB3-209ENST00000555609 C10orf71Q711Q0 1435 aa17.98■□□□□ 0.47
TUBB3-209ENST00000555609 DDX60LQ5H9U9 1706 aaKnown RBP17.97■□□□□ 0.47
TUBB3-209ENST00000555609 LRRIQ3A6PVS8 624 aaPredicted RBP17.97■□□□□ 0.47
TUBB3-209ENST00000555609 PJA2O43164 708 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 GOLGA8HP0CJ92 632 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 IDEP14735 1019 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 TCP1P17987 556 aaKnown RBP17.97■□□□□ 0.47
TUBB3-209ENST00000555609 SLC4A8Q2Y0W8 1093 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 CCNI2Q6ZMN8 369 aaPredicted RBP17.97■□□□□ 0.47
TUBB3-209ENST00000555609 COG1Q8WTW3 980 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 RAD54LQ92698 747 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 ALS2CR12Q96Q35 445 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 CD209Q9NNX6 404 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 SAP30BPQ9UHR5 308 aaKnown RBP17.97■□□□□ 0.47
TUBB3-209ENST00000555609 SNX12Q9UMY4 172 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 FAN1Q9Y2M0 1017 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 PCDHA13Q9Y5I0 950 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 SBF2Q86WG5 1849 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 GAKO14976 1311 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 SSU72P8A0A1W2PR75 194 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 TFRCP02786 760 aaKnown RBP17.97■□□□□ 0.47
TUBB3-209ENST00000555609 ADCY7P51828 1080 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 MAPK8IP2Q13387 824 aaPredicted RBP17.97■□□□□ 0.47
TUBB3-209ENST00000555609 TMEM119Q4V9L6 283 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 KRT79Q5XKE5 535 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 PPP4R3AQ6IN85 833 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 USP17L2Q6R6M4 530 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 SYN2Q92777 582 aaPredicted RBP17.97■□□□□ 0.47
TUBB3-209ENST00000555609 ARHGEF1Q92888 912 aaKnown RBP17.97■□□□□ 0.47
TUBB3-209ENST00000555609 PIGSQ96S52 555 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 SH2D4AQ9H788 454 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 TSKSQ9UJT2 592 aa17.97■□□□□ 0.47
TUBB3-209ENST00000555609 RCCD1A6NED2 376 aa17.96■□□□□ 0.47
TUBB3-209ENST00000555609 MYMKA6NI61 221 aa17.96■□□□□ 0.47
TUBB3-209ENST00000555609 EHHADHQ08426 723 aa17.96■□□□□ 0.47
TUBB3-209ENST00000555609 SF3B2Q13435 895 aaKnown RBP17.96■□□□□ 0.47
TUBB3-209ENST00000555609 POTEDQ86YR6 584 aa17.96■□□□□ 0.47
TUBB3-209ENST00000555609 RNF10Q8N5U6 811 aaKnown RBP17.96■□□□□ 0.47
TUBB3-209ENST00000555609 CEP95Q96GE4 821 aa17.96■□□□□ 0.47
TUBB3-209ENST00000555609 PNMA5Q96PV4 448 aa17.96■□□□□ 0.47
TUBB3-209ENST00000555609 IFIH1Q9BYX4 1025 aaKnown RBP17.96■□□□□ 0.47
TUBB3-209ENST00000555609 SUGCTQ9HAC7 445 aa17.96■□□□□ 0.47
TUBB3-209ENST00000555609 RNF14Q9UBS8 474 aa17.96■□□□□ 0.47
TUBB3-209ENST00000555609 HPCAL4Q9UM19 191 aa17.96■□□□□ 0.47
TUBB3-209ENST00000555609 SNHG28P0DPA3 235 aa17.95■□□□□ 0.46
TUBB3-209ENST00000555609 CAPN2P17655 700 aa17.95■□□□□ 0.46
TUBB3-209ENST00000555609 TXKP42681 527 aa17.95■□□□□ 0.46
TUBB3-209ENST00000555609 KLK7P49862 253 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms