RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 PPP1R11O60927 126 aaPredicted RBP16.05■□□□□ 0.16
PCNX4-209ENST00000555569 CFBP00751 764 aa16.05■□□□□ 0.16
PCNX4-209ENST00000555569 PSMC6P62333 389 aa16.05■□□□□ 0.16
PCNX4-209ENST00000555569 TROAPQ12815 778 aa16.05■□□□□ 0.16
PCNX4-209ENST00000555569 TTLL4Q14679 1199 aa16.05■□□□□ 0.16
PCNX4-209ENST00000555569 MFSD5Q6N075 450 aa16.05■□□□□ 0.16
PCNX4-209ENST00000555569 CATIPQ7Z7H3 387 aa16.05■□□□□ 0.16
PCNX4-209ENST00000555569 IGDCC4Q8TDY8 1250 aa16.05■□□□□ 0.16
PCNX4-209ENST00000555569 IWS1Q96ST2 819 aa16.05■□□□□ 0.16
PCNX4-209ENST00000555569 RMDN3Q96TC7 470 aa16.05■□□□□ 0.16
PCNX4-209ENST00000555569 RIOX1Q9H6W3 641 aa16.05■□□□□ 0.16
PCNX4-209ENST00000555569 MTMR10Q9NXD2 777 aa16.05■□□□□ 0.16
PCNX4-209ENST00000555569 SCN10AQ9Y5Y9 1956 aa16.05■□□□□ 0.16
PCNX4-209ENST00000555569 OPLAHO14841 1288 aa16.04■□□□□ 0.16
PCNX4-209ENST00000555569 ARIH2O95376 493 aa16.04■□□□□ 0.16
PCNX4-209ENST00000555569 MYL3P08590 195 aa16.04■□□□□ 0.16
PCNX4-209ENST00000555569 TXNP10599 105 aaKnown RBP16.04■□□□□ 0.16
PCNX4-209ENST00000555569 HSD17B4P51659 736 aa16.04■□□□□ 0.16
PCNX4-209ENST00000555569 PPIGQ13427 754 aaKnown RBP eCLIP16.04■□□□□ 0.16
PCNX4-209ENST00000555569 STXBP2Q15833 593 aa16.04■□□□□ 0.16
PCNX4-209ENST00000555569 SLC35G1Q2M3R5 365 aa16.04■□□□□ 0.16
PCNX4-209ENST00000555569 BRDTQ58F21 947 aaPredicted RBP16.04■□□□□ 0.16
PCNX4-209ENST00000555569 BMP2KLQ5H9B9 411 aa16.04■□□□□ 0.16
PCNX4-209ENST00000555569 ARHGEF16Q5VV41 709 aa16.04■□□□□ 0.16
PCNX4-209ENST00000555569 FAM109BQ6ICB4 259 aaPredicted RBP16.04■□□□□ 0.16
PCNX4-209ENST00000555569 CASC1Q6TDU7 716 aa16.04■□□□□ 0.16
PCNX4-209ENST00000555569 SKAP1Q86WV1 359 aa16.04■□□□□ 0.16
PCNX4-209ENST00000555569 HOMER1Q86YM7 354 aa16.04■□□□□ 0.16
PCNX4-209ENST00000555569 COPS5Q92905 334 aa16.04■□□□□ 0.16
PCNX4-209ENST00000555569 RNPC3Q96LT9 517 aaKnown RBP16.04■□□□□ 0.16
PCNX4-209ENST00000555569 PPP1R12CQ9BZL4 782 aa16.04■□□□□ 0.16
PCNX4-209ENST00000555569 GPHNQ9NQX3 736 aaPredicted RBP16.04■□□□□ 0.16
PCNX4-209ENST00000555569 PCDHA1Q9Y5I3 950 aa16.04■□□□□ 0.16
PCNX4-209ENST00000555569 SLC27A2O14975 620 aa16.03■□□□□ 0.16
PCNX4-209ENST00000555569 EIF2AK2P19525 551 aaKnown RBP16.03■□□□□ 0.16
PCNX4-209ENST00000555569 PURAQ00577 322 aaKnown RBP16.03■□□□□ 0.16
PCNX4-209ENST00000555569 GHRHRQ02643 423 aa16.03■□□□□ 0.16
PCNX4-209ENST00000555569 TRAF1Q13077 416 aa16.03■□□□□ 0.16
PCNX4-209ENST00000555569 TMEM199Q8N511 208 aa16.03■□□□□ 0.16
PCNX4-209ENST00000555569 SAMD3Q8N6K7 520 aa16.03■□□□□ 0.16
PCNX4-209ENST00000555569 PIGSQ96S52 555 aa16.03■□□□□ 0.16
PCNX4-209ENST00000555569 MTG1Q9BT17 334 aaPredicted RBP16.03■□□□□ 0.16
PCNX4-209ENST00000555569 MTA3Q9BTC8 594 aa16.03■□□□□ 0.16
PCNX4-209ENST00000555569 LY9Q9HBG7 655 aa16.03■□□□□ 0.16
PCNX4-209ENST00000555569 PXMP2Q9NR77 195 aa16.03■□□□□ 0.16
PCNX4-209ENST00000555569 MYH7BA7E2Y1 1941 aa16.03■□□□□ 0.16
PCNX4-209ENST00000555569 A6NJR5 290 aa16.02■□□□□ 0.16
PCNX4-209ENST00000555569 PRC1O43663 620 aa16.02■□□□□ 0.16
PCNX4-209ENST00000555569 CYTH3O43739 400 aa16.02■□□□□ 0.16
PCNX4-209ENST00000555569 B4GALT4O60513 344 aa16.02■□□□□ 0.16
PCNX4-209ENST00000555569 KPNA6O60684 536 aa16.02■□□□□ 0.16
PCNX4-209ENST00000555569 CYP2C18P33260 490 aa16.02■□□□□ 0.16
PCNX4-209ENST00000555569 MCM5P33992 734 aa16.02■□□□□ 0.16
PCNX4-209ENST00000555569 SMAD3P84022 425 aaKnown RBP16.02■□□□□ 0.16
PCNX4-209ENST00000555569 CREB3L3Q68CJ9 461 aa16.02■□□□□ 0.16
PCNX4-209ENST00000555569 CCDC62Q6P9F0 684 aa16.02■□□□□ 0.16
PCNX4-209ENST00000555569 SEPT14Q6ZU15 432 aa16.02■□□□□ 0.16
PCNX4-209ENST00000555569 ZNF654Q8IZM8 581 aa16.02■□□□□ 0.16
PCNX4-209ENST00000555569 MAP3K14Q99558 947 aa16.02■□□□□ 0.16
PCNX4-209ENST00000555569 TRPV6Q9H1D0 765 aa16.02■□□□□ 0.16
PCNX4-209ENST00000555569 HIPK3Q9H422 1215 aa16.02■□□□□ 0.16
PCNX4-209ENST00000555569 ANO2Q9NQ90 1003 aa16.02■□□□□ 0.16
PCNX4-209ENST00000555569 MAP3K20Q9NYL2 800 aaKnown RBP16.02■□□□□ 0.16
PCNX4-209ENST00000555569 LAMA2P24043 3122 aaKnown RBP16.02■□□□□ 0.15
PCNX4-209ENST00000555569 PNMA6FA0A0J9YX94 578 aa16.01■□□□□ 0.15
PCNX4-209ENST00000555569 DDAH1O94760 285 aa16.01■□□□□ 0.15
PCNX4-209ENST00000555569 GH1P01241 217 aa16.01■□□□□ 0.15
PCNX4-209ENST00000555569 NR3C2P08235 984 aa16.01■□□□□ 0.15
PCNX4-209ENST00000555569 CSF2RAP15509 400 aa16.01■□□□□ 0.15
PCNX4-209ENST00000555569 NECTIN1Q15223 517 aa16.01■□□□□ 0.15
PCNX4-209ENST00000555569 LY6KQ17RY6 165 aa16.01■□□□□ 0.15
PCNX4-209ENST00000555569 ZNF697Q5TEC3 545 aa16.01■□□□□ 0.15
PCNX4-209ENST00000555569 TMEM87BQ96K49 555 aa16.01■□□□□ 0.15
PCNX4-209ENST00000555569 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.01■□□□□ 0.15
PCNX4-209ENST00000555569 ALDH8A1Q9H2A2 487 aaPredicted RBP16.01■□□□□ 0.15
PCNX4-209ENST00000555569 EIF3JO75822 258 aaKnown RBP16■□□□□ 0.15
PCNX4-209ENST00000555569 HOXA13P31271 388 aaPredicted RBP16■□□□□ 0.15
PCNX4-209ENST00000555569 NBPF20Q3BBV1 942 aa16■□□□□ 0.15
PCNX4-209ENST00000555569 TMEM240Q5SV17 173 aa16■□□□□ 0.15
PCNX4-209ENST00000555569 TMTC2Q8N394 836 aa16■□□□□ 0.15
PCNX4-209ENST00000555569 CTCFLQ8NI51 663 aaPredicted RBP16■□□□□ 0.15
PCNX4-209ENST00000555569 PIBF1Q8WXW3 757 aa16■□□□□ 0.15
PCNX4-209ENST00000555569 PDCD2LQ9BRP1 358 aa16■□□□□ 0.15
PCNX4-209ENST00000555569 MYL10Q9BUA6 226 aa16■□□□□ 0.15
PCNX4-209ENST00000555569 NOC4LQ9BVI4 516 aaKnown RBP16■□□□□ 0.15
PCNX4-209ENST00000555569 STXBP5LQ9Y2K9 1186 aa16■□□□□ 0.15
PCNX4-209ENST00000555569 UMODL1Q5DID0 1318 aa15.99■□□□□ 0.15
PCNX4-209ENST00000555569 GCOM1H8Y6P7 765 aaPredicted RBP15.99■□□□□ 0.15
PCNX4-209ENST00000555569 SH2B2O14492 632 aaPredicted RBP15.99■□□□□ 0.15
PCNX4-209ENST00000555569 SUPT20HL2P0C7V6 817 aa15.99■□□□□ 0.15
PCNX4-209ENST00000555569 POLR2MP0CAP2 368 aa15.99■□□□□ 0.15
PCNX4-209ENST00000555569 ACRP10323 421 aa15.99■□□□□ 0.15
PCNX4-209ENST00000555569 MYCLP12524 364 aaPredicted RBP15.99■□□□□ 0.15
PCNX4-209ENST00000555569 KIF5BP33176 963 aa15.99■□□□□ 0.15
PCNX4-209ENST00000555569 ARHGAP1Q07960 439 aa15.99■□□□□ 0.15
PCNX4-209ENST00000555569 FAM47CQ5HY64 1035 aa15.99■□□□□ 0.15
PCNX4-209ENST00000555569 PSRC1Q6PGN9 363 aaPredicted RBP15.99■□□□□ 0.15
PCNX4-209ENST00000555569 NFXL1Q6ZNB6 911 aa15.99■□□□□ 0.15
PCNX4-209ENST00000555569 C16orf59Q7L2K0 433 aa15.99■□□□□ 0.15
PCNX4-209ENST00000555569 AFG1LQ8WV93 481 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms