RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 PCED1AQ9H1Q7 454 aa6.52□□□□□ -1.37
SNX6-204ENST00000555541 WHRNQ9P202 907 aa6.52□□□□□ -1.37
SNX6-204ENST00000555541 ST6GALNAC2Q9UJ37 374 aa6.52□□□□□ -1.37
SNX6-204ENST00000555541 A0A1W2PQH9 124 aa6.51□□□□□ -1.37
SNX6-204ENST00000555541 SOX9P48436 509 aa6.51□□□□□ -1.37
SNX6-204ENST00000555541 GIPRP48546 466 aa6.51□□□□□ -1.37
SNX6-204ENST00000555541 CACNB2Q08289 660 aaPredicted RBP6.51□□□□□ -1.37
SNX6-204ENST00000555541 CRB2Q5IJ48 1285 aa6.51□□□□□ -1.37
SNX6-204ENST00000555541 CCDC81Q6ZN84 652 aa6.51□□□□□ -1.37
SNX6-204ENST00000555541 ADCY4Q8NFM4 1077 aa6.51□□□□□ -1.37
SNX6-204ENST00000555541 PCDHB10Q9UN67 800 aa6.51□□□□□ -1.37
SNX6-204ENST00000555541 INVSQ9Y283 1065 aa6.51□□□□□ -1.37
SNX6-204ENST00000555541 RWDD3Q9Y3V2 267 aa6.51□□□□□ -1.37
SNX6-204ENST00000555541 EPHX1P07099 455 aa6.5□□□□□ -1.37
SNX6-204ENST00000555541 CPNE8Q86YQ8 564 aa6.5□□□□□ -1.37
SNX6-204ENST00000555541 NETO2Q8NC67 525 aa6.5□□□□□ -1.37
SNX6-204ENST00000555541 CD248Q9HCU0 757 aa6.5□□□□□ -1.37
SNX6-204ENST00000555541 C2orf71A6NGG8 1288 aa6.49□□□□□ -1.37
SNX6-204ENST00000555541 STXBP3O00186 592 aa6.49□□□□□ -1.37
SNX6-204ENST00000555541 PAK2Q13177 524 aa6.49□□□□□ -1.37
SNX6-204ENST00000555541 COL9A2Q14055 689 aaPredicted RBP6.49□□□□□ -1.37
SNX6-204ENST00000555541 DPY19L1Q2PZI1 675 aa6.49□□□□□ -1.37
SNX6-204ENST00000555541 GNPTABQ3T906 1256 aa6.49□□□□□ -1.37
SNX6-204ENST00000555541 LIMS2Q7Z4I7 341 aa6.49□□□□□ -1.37
SNX6-204ENST00000555541 METTL16Q86W50 562 aaKnown RBP6.49□□□□□ -1.37
SNX6-204ENST00000555541 LZTR1Q8N653 840 aa6.49□□□□□ -1.37
SNX6-204ENST00000555541 RNF34Q969K3 372 aa6.49□□□□□ -1.37
SNX6-204ENST00000555541 RCC1LQ96I51 464 aaKnown RBP6.49□□□□□ -1.37
SNX6-204ENST00000555541 FGD4Q96M96 766 aa6.49□□□□□ -1.37
SNX6-204ENST00000555541 CGGBP1Q9UFW8 167 aaPredicted RBP6.49□□□□□ -1.37
SNX6-204ENST00000555541 DBR1Q9UK59 544 aaKnown RBP6.49□□□□□ -1.37
SNX6-204ENST00000555541 C7orf72A4D263 438 aa6.48□□□□□ -1.37
SNX6-204ENST00000555541 TRIM26Q12899 539 aaPredicted RBP6.48□□□□□ -1.37
SNX6-204ENST00000555541 RGL3Q3MIN7 710 aa6.48□□□□□ -1.37
SNX6-204ENST00000555541 C19orf47Q8N9M1 422 aaKnown RBP6.48□□□□□ -1.37
SNX6-204ENST00000555541 PLEKHO2Q8TD55 490 aa6.48□□□□□ -1.37
SNX6-204ENST00000555541 RASGRP4Q8TDF6 673 aa6.48□□□□□ -1.37
SNX6-204ENST00000555541 ZBTB8AQ96BR9 441 aa6.48□□□□□ -1.37
SNX6-204ENST00000555541 SYT3Q9BQG1 590 aa6.48□□□□□ -1.37
SNX6-204ENST00000555541 PHAXQ9H814 394 aaKnown RBP6.48□□□□□ -1.37
SNX6-204ENST00000555541 GULP1Q9UBP9 304 aa6.48□□□□□ -1.37
SNX6-204ENST00000555541 BACE2Q9Y5Z0 518 aa6.48□□□□□ -1.37
SNX6-204ENST00000555541 FZD7O75084 574 aa6.47□□□□□ -1.37
SNX6-204ENST00000555541 RPL13P26373 211 aaKnown RBP6.47□□□□□ -1.37
SNX6-204ENST00000555541 SLC7A5Q01650 507 aa6.47□□□□□ -1.37
SNX6-204ENST00000555541 CYP4F3Q08477 520 aa6.47□□□□□ -1.37
SNX6-204ENST00000555541 ICAM4Q14773 271 aa6.47□□□□□ -1.37
SNX6-204ENST00000555541 SLC9A5Q14940 896 aa6.47□□□□□ -1.37
SNX6-204ENST00000555541 FAM26FQ5R3K3 315 aa6.47□□□□□ -1.37
SNX6-204ENST00000555541 MBLAC2Q68D91 279 aa6.47□□□□□ -1.37
SNX6-204ENST00000555541 HEATR6Q6AI08 1181 aaKnown RBP6.47□□□□□ -1.37
SNX6-204ENST00000555541 TTLL7Q6ZT98 887 aa6.47□□□□□ -1.37
SNX6-204ENST00000555541 LGI4Q8N135 537 aa6.47□□□□□ -1.37
SNX6-204ENST00000555541 RGS22Q8NE09 1264 aa6.47□□□□□ -1.37
SNX6-204ENST00000555541 DNERQ8NFT8 737 aa6.47□□□□□ -1.37
SNX6-204ENST00000555541 DPF3Q92784 378 aa6.47□□□□□ -1.37
SNX6-204ENST00000555541 PEX11GQ96HA9 241 aa6.47□□□□□ -1.37
SNX6-204ENST00000555541 GORASP1Q9BQQ3 440 aa6.47□□□□□ -1.37
SNX6-204ENST00000555541 EFR3BQ9Y2G0 817 aa6.47□□□□□ -1.37
SNX6-204ENST00000555541 SIT1Q9Y3P8 196 aa6.47□□□□□ -1.37
SNX6-204ENST00000555541 RECKO95980 971 aa6.46□□□□□ -1.38
SNX6-204ENST00000555541 C8BP07358 591 aa6.46□□□□□ -1.38
SNX6-204ENST00000555541 THBS2P35442 1172 aa6.46□□□□□ -1.38
SNX6-204ENST00000555541 EIF6P56537 245 aaKnown RBP6.46□□□□□ -1.38
SNX6-204ENST00000555541 GRB10Q13322 594 aa6.46□□□□□ -1.38
SNX6-204ENST00000555541 SMAD4Q13485 552 aaKnown RBP6.46□□□□□ -1.38
SNX6-204ENST00000555541 PRR31Q5SQ13 230 aa6.46□□□□□ -1.38
SNX6-204ENST00000555541 CHST13Q8NET6 341 aa6.46□□□□□ -1.38
SNX6-204ENST00000555541 COPS5Q92905 334 aa6.46□□□□□ -1.38
SNX6-204ENST00000555541 SHDQ96IW2 340 aa6.46□□□□□ -1.38
SNX6-204ENST00000555541 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.46□□□□□ -1.38
SNX6-204ENST00000555541 PPP4R1LQ9P1A2 415 aa6.46□□□□□ -1.38
SNX6-204ENST00000555541 SLC12A7Q9Y666 1083 aa6.46□□□□□ -1.38
SNX6-204ENST00000555541 ZBTB7AO95365 584 aa6.45□□□□□ -1.38
SNX6-204ENST00000555541 SEPHS1P49903 392 aa6.45□□□□□ -1.38
SNX6-204ENST00000555541 AMPD2Q01433 879 aa6.45□□□□□ -1.38
SNX6-204ENST00000555541 KIAA2012Q0VF49 1180 aa6.45□□□□□ -1.38
SNX6-204ENST00000555541 R3HDM1Q15032 1099 aaKnown RBP6.45□□□□□ -1.38
SNX6-204ENST00000555541 C9orf131Q5VYM1 1079 aa6.45□□□□□ -1.38
SNX6-204ENST00000555541 WWC2Q6AWC2 1192 aa6.45□□□□□ -1.38
SNX6-204ENST00000555541 DDX11Q96FC9 970 aa6.45□□□□□ -1.38
SNX6-204ENST00000555541 GBP3Q9H0R5 595 aa6.45□□□□□ -1.38
SNX6-204ENST00000555541 MROH6A6NGR9 719 aa6.44□□□□□ -1.38
SNX6-204ENST00000555541 ARNTLO00327 626 aa6.44□□□□□ -1.38
SNX6-204ENST00000555541 PPM1BO75688 479 aa6.44□□□□□ -1.38
SNX6-204ENST00000555541 NTRK1P04629 796 aa6.44□□□□□ -1.38
SNX6-204ENST00000555541 PAMP19021 973 aa6.44□□□□□ -1.38
SNX6-204ENST00000555541 CASP7P55210 303 aa6.44□□□□□ -1.38
SNX6-204ENST00000555541 KLF10Q13118 480 aa6.44□□□□□ -1.38
SNX6-204ENST00000555541 ADAT2Q7Z6V5 191 aaKnown RBP6.44□□□□□ -1.38
SNX6-204ENST00000555541 ZNF654Q8IZM8 581 aa6.44□□□□□ -1.38
SNX6-204ENST00000555541 CRBNQ96SW2 442 aa6.44□□□□□ -1.38
SNX6-204ENST00000555541 MMP19Q99542 508 aa6.44□□□□□ -1.38
SNX6-204ENST00000555541 C11orf84Q9BUA3 381 aaPredicted RBP6.44□□□□□ -1.38
SNX6-204ENST00000555541 KLC2Q9H0B6 622 aa6.44□□□□□ -1.38
SNX6-204ENST00000555541 VPS11Q9H270 941 aa6.44□□□□□ -1.38
SNX6-204ENST00000555541 APEX2Q9UBZ4 518 aa6.44□□□□□ -1.38
SNX6-204ENST00000555541 NPHP3-ACAD11A0A0J9YXS1 232 aa6.43□□□□□ -1.38
SNX6-204ENST00000555541 SGSM2O43147 1006 aa6.43□□□□□ -1.38
SNX6-204ENST00000555541 VAMP1P23763 118 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms