RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SCFD2Q8WU76 684 aa13.95□□□□□ -0.18
SRP54-206ENST00000555317 TAAR1Q96RJ0 339 aa13.95□□□□□ -0.18
SRP54-206ENST00000555317 WDR11Q9BZH6 1224 aa13.95□□□□□ -0.18
SRP54-206ENST00000555317 KATNBL1Q9H079 304 aa13.95□□□□□ -0.18
SRP54-206ENST00000555317 PDRG1Q9NUG6 133 aa13.95□□□□□ -0.18
SRP54-206ENST00000555317 CNTNAP5Q8WYK1 1306 aa13.94□□□□□ -0.18
SRP54-206ENST00000555317 ALPK3Q96L96 1907 aa13.94□□□□□ -0.18
SRP54-206ENST00000555317 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.94□□□□□ -0.18
SRP54-206ENST00000555317 OPLAHO14841 1288 aa13.94□□□□□ -0.18
SRP54-206ENST00000555317 EDNRBP24530 442 aa13.94□□□□□ -0.18
SRP54-206ENST00000555317 ATN1P54259 1190 aaPredicted RBP13.94□□□□□ -0.18
SRP54-206ENST00000555317 GHRHRQ02643 423 aa13.94□□□□□ -0.18
SRP54-206ENST00000555317 TTLL4Q14679 1199 aa13.94□□□□□ -0.18
SRP54-206ENST00000555317 BRDTQ58F21 947 aaPredicted RBP13.94□□□□□ -0.18
SRP54-206ENST00000555317 GNASQ5JWF2 1037 aa13.94□□□□□ -0.18
SRP54-206ENST00000555317 C7orf61Q8IZ16 206 aa13.94□□□□□ -0.18
SRP54-206ENST00000555317 FERMT2Q96AC1 680 aa13.94□□□□□ -0.18
SRP54-206ENST00000555317 TSEN34Q9BSV6 310 aaKnown RBP13.94□□□□□ -0.18
SRP54-206ENST00000555317 PSTPIP2Q9H939 334 aa13.94□□□□□ -0.18
SRP54-206ENST00000555317 PXMP2Q9NR77 195 aa13.94□□□□□ -0.18
SRP54-206ENST00000555317 PDGFCQ9NRA1 345 aa13.94□□□□□ -0.18
SRP54-206ENST00000555317 COL20A1Q9P218 1284 aa13.94□□□□□ -0.18
SRP54-206ENST00000555317 RBM27Q9P2N5 1060 aaKnown RBP13.94□□□□□ -0.18
SRP54-206ENST00000555317 MOXD2PA6NHM9 499 aa13.93□□□□□ -0.18
SRP54-206ENST00000555317 hCG_1984214I3L0E3 225 aa13.93□□□□□ -0.18
SRP54-206ENST00000555317 DYNC1LI2O43237 492 aaPredicted RBP13.93□□□□□ -0.18
SRP54-206ENST00000555317 ADAMTS4O75173 837 aa13.93□□□□□ -0.18
SRP54-206ENST00000555317 NR3C2P08235 984 aa13.93□□□□□ -0.18
SRP54-206ENST00000555317 MYCLP12524 364 aaPredicted RBP13.93□□□□□ -0.18
SRP54-206ENST00000555317 SMPD1P17405 629 aa13.93□□□□□ -0.18
SRP54-206ENST00000555317 CCND2P30279 289 aa13.93□□□□□ -0.18
SRP54-206ENST00000555317 NAPAP54920 295 aa13.93□□□□□ -0.18
SRP54-206ENST00000555317 GJA9P57773 515 aa13.93□□□□□ -0.18
SRP54-206ENST00000555317 KCNA10Q16322 511 aa13.93□□□□□ -0.18
SRP54-206ENST00000555317 DUSP28Q4G0W2 176 aa13.93□□□□□ -0.18
SRP54-206ENST00000555317 TAPT1Q6NXT6 567 aa13.93□□□□□ -0.18
SRP54-206ENST00000555317 SEPT14Q6ZU15 432 aa13.93□□□□□ -0.18
SRP54-206ENST00000555317 ZNF713Q8N859 430 aaPredicted RBP13.93□□□□□ -0.18
SRP54-206ENST00000555317 GPKOWQ92917 476 aaPredicted RBP eCLIP13.93□□□□□ -0.18
SRP54-206ENST00000555317 VTI1AQ96AJ9 217 aa13.93□□□□□ -0.18
SRP54-206ENST00000555317 AGXT2Q9BYV1 514 aa13.93□□□□□ -0.18
SRP54-206ENST00000555317 UPF3AQ9H1J1 476 aaKnown RBP13.93□□□□□ -0.18
SRP54-206ENST00000555317 PHF24Q9UPV7 400 aa13.93□□□□□ -0.18
SRP54-206ENST00000555317 V9GY48 417 aaPredicted RBP13.93□□□□□ -0.18
SRP54-206ENST00000555317 KIAA1217Q5T5P2 1943 aa13.93□□□□□ -0.18
SRP54-206ENST00000555317 A0A1W2PQ45 241 aaPredicted RBP13.92□□□□□ -0.18
SRP54-206ENST00000555317 A0A1W2PQY0 241 aa13.92□□□□□ -0.18
SRP54-206ENST00000555317 H0YGN5 161 aa13.92□□□□□ -0.18
SRP54-206ENST00000555317 CPLX1O14810 134 aa13.92□□□□□ -0.18
SRP54-206ENST00000555317 NKRFO15226 690 aaKnown RBP eCLIP13.92□□□□□ -0.18
SRP54-206ENST00000555317 ADCY6O43306 1168 aa13.92□□□□□ -0.18
SRP54-206ENST00000555317 EIF3JO75822 258 aaKnown RBP13.92□□□□□ -0.18
SRP54-206ENST00000555317 CST5P28325 142 aaPredicted RBP13.92□□□□□ -0.18
SRP54-206ENST00000555317 CDC27P30260 824 aa13.92□□□□□ -0.18
SRP54-206ENST00000555317 ADD1P35611 737 aaKnown RBP13.92□□□□□ -0.18
SRP54-206ENST00000555317 ACLYP53396 1101 aa13.92□□□□□ -0.18
SRP54-206ENST00000555317 ANKRD1Q15327 319 aa13.92□□□□□ -0.18
SRP54-206ENST00000555317 FSCN1Q16658 493 aaKnown RBP13.92□□□□□ -0.18
SRP54-206ENST00000555317 LRRC26Q2I0M4 334 aa13.92□□□□□ -0.18
SRP54-206ENST00000555317 PPP1R18Q6NYC8 613 aa13.92□□□□□ -0.18
SRP54-206ENST00000555317 CPLX2Q6PUV4 134 aaKnown RBP13.92□□□□□ -0.18
SRP54-206ENST00000555317 OR6J1Q8NGC5 347 aa13.92□□□□□ -0.18
SRP54-206ENST00000555317 GLT1D1Q96MS3 346 aa13.92□□□□□ -0.18
SRP54-206ENST00000555317 EHMT1Q9H9B1 1298 aa13.92□□□□□ -0.18
SRP54-206ENST00000555317 STARD7Q9NQZ5 370 aa13.92□□□□□ -0.18
SRP54-206ENST00000555317 PRKAG2Q9UGJ0 569 aa13.92□□□□□ -0.18
SRP54-206ENST00000555317 GNEQ9Y223 722 aaKnown RBP13.92□□□□□ -0.18
SRP54-206ENST00000555317 ATP11BQ9Y2G3 1177 aa13.92□□□□□ -0.18
SRP54-206ENST00000555317 Q9Y3F1 56 aa13.92□□□□□ -0.18
SRP54-206ENST00000555317 NID2Q14112 1375 aa13.92□□□□□ -0.18
SRP54-206ENST00000555317 RBM47A0AV96 593 aaKnown RBP13.91□□□□□ -0.18
SRP54-206ENST00000555317 SPDYE3A6NKU9 549 aa13.91□□□□□ -0.18
SRP54-206ENST00000555317 TXNP10599 105 aaKnown RBP13.91□□□□□ -0.18
SRP54-206ENST00000555317 PDIA3P30101 505 aaKnown RBP13.91□□□□□ -0.18
SRP54-206ENST00000555317 CPT1AP50416 773 aa13.91□□□□□ -0.18
SRP54-206ENST00000555317 ADCY7P51828 1080 aa13.91□□□□□ -0.18
SRP54-206ENST00000555317 CCT2P78371 535 aaKnown RBP13.91□□□□□ -0.18
SRP54-206ENST00000555317 BEX3Q00994 111 aa13.91□□□□□ -0.18
SRP54-206ENST00000555317 TOB2Q14106 344 aaPredicted RBP13.91□□□□□ -0.18
SRP54-206ENST00000555317 PGM5Q15124 567 aa13.91□□□□□ -0.18
SRP54-206ENST00000555317 WWC2Q6AWC2 1192 aa13.91□□□□□ -0.18
SRP54-206ENST00000555317 USP17L6PQ6QN14 398 aa13.91□□□□□ -0.18
SRP54-206ENST00000555317 TRIM22Q8IYM9 498 aa13.91□□□□□ -0.18
SRP54-206ENST00000555317 KLHDC9Q8NEP7 349 aa13.91□□□□□ -0.18
SRP54-206ENST00000555317 CCDC12Q8WUD4 166 aaPredicted RBP13.91□□□□□ -0.18
SRP54-206ENST00000555317 PDCD2LQ9BRP1 358 aa13.91□□□□□ -0.18
SRP54-206ENST00000555317 GLT8D2Q9H1C3 349 aa13.91□□□□□ -0.18
SRP54-206ENST00000555317 MRVI1Q9Y6F6 885 aa13.91□□□□□ -0.18
SRP54-206ENST00000555317 MYADML2A6NDP7 307 aa13.9□□□□□ -0.18
SRP54-206ENST00000555317 PIK3CDO00329 1044 aa13.9□□□□□ -0.18
SRP54-206ENST00000555317 ASGR1P07306 291 aa13.9□□□□□ -0.18
SRP54-206ENST00000555317 EVCP57679 992 aa13.9□□□□□ -0.18
SRP54-206ENST00000555317 RTP1P59025 263 aa13.9□□□□□ -0.18
SRP54-206ENST00000555317 FUT2Q10981 343 aa13.9□□□□□ -0.18
SRP54-206ENST00000555317 STK3Q13188 491 aa13.9□□□□□ -0.18
SRP54-206ENST00000555317 GNPTABQ3T906 1256 aa13.9□□□□□ -0.18
SRP54-206ENST00000555317 KCNV1Q6PIU1 500 aa13.9□□□□□ -0.18
SRP54-206ENST00000555317 SLC39A5Q6ZMH5 540 aa13.9□□□□□ -0.18
SRP54-206ENST00000555317 ZNF274Q96GC6 653 aaPredicted RBP13.9□□□□□ -0.18
SRP54-206ENST00000555317 SLC26A6Q9BXS9 759 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms