RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 TSPY3P0CV98 308 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 TSPY8P0CW00 308 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 SRGNP10124 158 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 MYBL2P10244 700 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 PLCG2P16885 1265 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 FNTAP49354 379 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 KIF5AQ12840 1032 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 TRAPPC3LQ5T215 181 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 MEX3CQ5U5Q3 659 aaKnown RBP11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 KDM7AQ6ZMT4 941 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 DTHD1Q6ZMT9 781 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 SND1Q7KZF4 910 aaKnown RBP eCLIP11.87□□□□□ -0.516e-6■□□□□ 9.2
MTHFD1-210ENST00000555252 TXNRD3Q86VQ6 643 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 CD302Q8IX05 232 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 TTYH3Q9C0H2 523 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 TRIM10Q9UDY6 481 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 M0R2N6 131 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 RPN1P04843 607 aaKnown RBP11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 ADRA2BP18089 450 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 SMARCA1P28370 1054 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 CDC25AP30304 524 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 PRPHP41219 470 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 SLF2Q8IX21 1173 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 SMYD4Q8IYR2 804 aaPredicted RBP11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 ADSSL1Q8N142 457 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 MREGQ8N565 214 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 OTUD6BQ8N6M0 293 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 SH3RF3Q8TEJ3 882 aaPredicted RBP11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 MAGEF1Q9HAY2 307 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 MAGEC2Q9UBF1 373 aaPredicted RBP11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 MAD2L2Q9UI95 211 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 TSKSQ9UJT2 592 aa11.87□□□□□ -0.51
MTHFD1-210ENST00000555252 PALM3A6NDB9 673 aaPredicted RBP11.86□□□□□ -0.51
MTHFD1-210ENST00000555252 NDUFAB1O14561 156 aa11.86□□□□□ -0.51
MTHFD1-210ENST00000555252 CHUKO15111 745 aa11.86□□□□□ -0.51
MTHFD1-210ENST00000555252 ATP2B4P23634 1241 aa11.86□□□□□ -0.51
MTHFD1-210ENST00000555252 STAT6P42226 847 aa11.86□□□□□ -0.51
MTHFD1-210ENST00000555252 PSEN1P49768 467 aa11.86□□□□□ -0.51
MTHFD1-210ENST00000555252 EVX2Q03828 476 aa11.86□□□□□ -0.51
MTHFD1-210ENST00000555252 ORC2Q13416 577 aaPredicted RBP11.86□□□□□ -0.51
MTHFD1-210ENST00000555252 IL17AQ16552 155 aa11.86□□□□□ -0.51
MTHFD1-210ENST00000555252 CREG2Q8IUH2 290 aa11.86□□□□□ -0.51
MTHFD1-210ENST00000555252 FAM114A1Q8IWE2 563 aa11.86□□□□□ -0.51
MTHFD1-210ENST00000555252 ZBTB9Q96C00 473 aa11.86□□□□□ -0.51
MTHFD1-210ENST00000555252 CAPZA3Q96KX2 299 aa11.86□□□□□ -0.51
MTHFD1-210ENST00000555252 CUEDC2Q9H467 287 aa11.86□□□□□ -0.51
MTHFD1-210ENST00000555252 BARHL2Q9NY43 387 aa11.86□□□□□ -0.51
MTHFD1-210ENST00000555252 STIM2Q9P246 746 aa11.86□□□□□ -0.51
MTHFD1-210ENST00000555252 CEP83Q9Y592 693 aa11.86□□□□□ -0.51
MTHFD1-210ENST00000555252 PDE2AO00408 941 aaPredicted RBP11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 SRGAP2O75044 1071 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 HNRNPH3P31942 346 aaKnown RBP11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 IRF2BP1Q8IU81 584 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 CNBD1Q8NA66 436 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 SPZ1Q9BXG8 430 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 CCSER1Q9C0I3 900 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 EPN3Q9H201 632 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 NHEJ1Q9H9Q4 299 aaPredicted RBP11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 JADE2Q9NQC1 790 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 RNF216Q9NWF9 866 aaPredicted RBP11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 HYOU1Q9Y4L1 999 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 TNRC6CQ9HCJ0 1690 aaKnown RBP11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 THSD7AQ9UPZ6 1657 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 PSMA7O14818 248 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 CLGNO14967 610 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 LCA5LO95447 670 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 PRCPP42785 496 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 C2orf54Q08AI8 447 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 SPA17Q15506 151 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 SMIM5Q71RC9 77 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 KRT25Q7Z3Z0 450 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 CCDC50Q8IVM0 306 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 GPATCH11Q8N954 259 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 SPATA4Q8NEY3 305 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 DYNLL2Q96FJ2 89 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 DHTKD1Q96HY7 919 aaPredicted RBP11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 AK8Q96MA6 479 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 ALS2CR12Q96Q35 445 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 DISC1Q9NRI5 854 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 EXOC1Q9NV70 894 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 USP21Q9UK80 565 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 PCDHA6Q9UN73 950 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 PCDHA8Q9Y5H6 950 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 CAPN7Q9Y6W3 813 aa11.85□□□□□ -0.51
MTHFD1-210ENST00000555252 LY75O60449 1722 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 NAV1Q8NEY1 1877 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 GPR75-ASB3A0A0A6YYF3 556 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 H0YHG0 523 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 STXBP3O00186 592 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 RASA1P20936 1047 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 CASP1P29466 404 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 PAFAH1B1P43034 410 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 SMTNP53814 917 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 FBXW10Q5XX13 1052 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 C16orf86Q6ZW13 317 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 TAX1BP1Q86VP1 789 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 STAG2Q8N3U4 1231 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 CCDC24Q8N4L8 307 aa11.84□□□□□ -0.51
MTHFD1-210ENST00000555252 EIF1ADQ8N9N8 165 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms