RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-208ENST00000555094 CALCRLQ16602 461 aa12.3□□□□□ -0.44
GABRB3-208ENST00000555094 KRBA2Q6ZNG9 492 aa12.3□□□□□ -0.44
GABRB3-208ENST00000555094 FCHSD1Q86WN1 690 aa12.3□□□□□ -0.44
GABRB3-208ENST00000555094 DDX25Q9UHL0 483 aaKnown RBP12.3□□□□□ -0.44
GABRB3-208ENST00000555094 CTDP1Q9Y5B0 961 aaPredicted RBP12.3□□□□□ -0.44
GABRB3-208ENST00000555094 FRMPD4Q14CM0 1322 aa12.29□□□□□ -0.44
GABRB3-208ENST00000555094 RPTORQ8N122 1335 aa12.29□□□□□ -0.44
GABRB3-208ENST00000555094 POLR2DO15514 142 aaKnown RBP12.29□□□□□ -0.44
GABRB3-208ENST00000555094 CYP3A4P08684 503 aa12.29□□□□□ -0.44
GABRB3-208ENST00000555094 HOXA7P31268 230 aaPredicted RBP12.29□□□□□ -0.44
GABRB3-208ENST00000555094 CIITAP33076 1130 aa12.29□□□□□ -0.44
GABRB3-208ENST00000555094 TYRO3Q06418 890 aa12.29□□□□□ -0.44
GABRB3-208ENST00000555094 TMEM132BQ14DG7 1078 aa12.29□□□□□ -0.44
GABRB3-208ENST00000555094 LONRF3Q496Y0 759 aa12.29□□□□□ -0.44
GABRB3-208ENST00000555094 SNRNP48Q6IEG0 339 aaKnown RBP12.29□□□□□ -0.44
GABRB3-208ENST00000555094 POTEEQ6S8J3 1075 aa12.29□□□□□ -0.44
GABRB3-208ENST00000555094 ZNF526Q8TF50 670 aaPredicted RBP12.29□□□□□ -0.44
GABRB3-208ENST00000555094 LENG9Q96B70 501 aa12.29□□□□□ -0.44
GABRB3-208ENST00000555094 RBSNQ9H1K0 784 aa12.29□□□□□ -0.44
GABRB3-208ENST00000555094 GBA2Q9HCG7 927 aaPredicted RBP12.29□□□□□ -0.44
GABRB3-208ENST00000555094 HOMER2Q9NSB8 354 aa12.29□□□□□ -0.44
GABRB3-208ENST00000555094 RNF146Q9NTX7 359 aa12.29□□□□□ -0.44
GABRB3-208ENST00000555094 COL20A1Q9P218 1284 aa12.29□□□□□ -0.44
GABRB3-208ENST00000555094 AGTPBP1Q9UPW5 1226 aa12.29□□□□□ -0.44
GABRB3-208ENST00000555094 PP2D1A8MPX8 630 aa12.28□□□□□ -0.44
GABRB3-208ENST00000555094 CCDC192P0DO97 292 aa12.28□□□□□ -0.44
GABRB3-208ENST00000555094 DEKP35659 375 aaKnown RBP12.28□□□□□ -0.44
GABRB3-208ENST00000555094 FXR2P51116 673 aaKnown RBP eCLIP12.28□□□□□ -0.44
GABRB3-208ENST00000555094 E2F4Q16254 413 aa12.28□□□□□ -0.44
GABRB3-208ENST00000555094 SLC30A10Q6XR72 485 aa12.28□□□□□ -0.44
GABRB3-208ENST00000555094 MCF2L2Q86YR7 1114 aa12.28□□□□□ -0.44
GABRB3-208ENST00000555094 SAMD3Q8N6K7 520 aa12.28□□□□□ -0.44
GABRB3-208ENST00000555094 PDILTQ8N807 584 aa12.28□□□□□ -0.44
GABRB3-208ENST00000555094 IGSF22Q8N9C0 903 aa12.28□□□□□ -0.44
GABRB3-208ENST00000555094 HAS1Q92839 578 aa12.28□□□□□ -0.44
GABRB3-208ENST00000555094 AK8Q96MA6 479 aa12.28□□□□□ -0.44
GABRB3-208ENST00000555094 TRERF1Q96PN7 1200 aa12.28□□□□□ -0.44
GABRB3-208ENST00000555094 SDF4Q9BRK5 362 aa12.28□□□□□ -0.44
GABRB3-208ENST00000555094 TEX13BQ9BXU2 312 aa12.28□□□□□ -0.44
GABRB3-208ENST00000555094 EHMT1Q9H9B1 1298 aa12.28□□□□□ -0.44
GABRB3-208ENST00000555094 GRPEL1Q9HAV7 217 aa12.28□□□□□ -0.44
GABRB3-208ENST00000555094 KCNMB3Q9NPA1 279 aa12.28□□□□□ -0.44
GABRB3-208ENST00000555094 HOXC10Q9NYD6 342 aa12.28□□□□□ -0.44
GABRB3-208ENST00000555094 SERTAD1Q9UHV2 236 aa12.28□□□□□ -0.44
GABRB3-208ENST00000555094 RIPK3Q9Y572 518 aa12.28□□□□□ -0.44
GABRB3-208ENST00000555094 FAM86B1E9PN63 330 aa12.27□□□□□ -0.44
GABRB3-208ENST00000555094 CELF2O95319 508 aaKnown RBP12.27□□□□□ -0.44
GABRB3-208ENST00000555094 FAM86B2P0C5J1 330 aa12.27□□□□□ -0.44
GABRB3-208ENST00000555094 TKFCQ3LXA3 575 aa12.27□□□□□ -0.44
GABRB3-208ENST00000555094 Q4G0T1 1027 aa12.27□□□□□ -0.44
GABRB3-208ENST00000555094 GPAT2Q6NUI2 795 aa12.27□□□□□ -0.44
GABRB3-208ENST00000555094 LBX2Q6XYB7 198 aa12.27□□□□□ -0.44
GABRB3-208ENST00000555094 ELOA2Q8IYF1 753 aaPredicted RBP12.27□□□□□ -0.44
GABRB3-208ENST00000555094 CNNM3Q8NE01 707 aa12.27□□□□□ -0.44
GABRB3-208ENST00000555094 ETNPPLQ8TBG4 499 aa12.27□□□□□ -0.44
GABRB3-208ENST00000555094 SYTL5Q8TDW5 730 aaPredicted RBP12.27□□□□□ -0.44
GABRB3-208ENST00000555094 BBXQ8WY36 941 aaPredicted RBP12.27□□□□□ -0.44
GABRB3-208ENST00000555094 ERCC4Q92889 916 aaPredicted RBP12.27□□□□□ -0.44
GABRB3-208ENST00000555094 DHX58Q96C10 678 aa12.27□□□□□ -0.44
GABRB3-208ENST00000555094 SLC10A4Q96EP9 437 aa12.27□□□□□ -0.44
GABRB3-208ENST00000555094 CCSER1Q9C0I3 900 aa12.27□□□□□ -0.44
GABRB3-208ENST00000555094 USP25Q9UHP3 1055 aa12.27□□□□□ -0.44
GABRB3-208ENST00000555094 LRRC37A2A6NM11 1700 aa12.27□□□□□ -0.44
GABRB3-208ENST00000555094 IGLV3-22A0A075B6J6 115 aa12.27□□□□□ -0.45
GABRB3-208ENST00000555094 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.27□□□□□ -0.45
GABRB3-208ENST00000555094 FOXN1O15353 648 aa12.27□□□□□ -0.45
GABRB3-208ENST00000555094 ITGBL1O95965 494 aaPredicted RBP12.27□□□□□ -0.45
GABRB3-208ENST00000555094 SLFN14P0C7P3 912 aa12.27□□□□□ -0.45
GABRB3-208ENST00000555094 CDC25AP30304 524 aa12.27□□□□□ -0.45
GABRB3-208ENST00000555094 TXLNAP40222 546 aa12.27□□□□□ -0.45
GABRB3-208ENST00000555094 TXKP42681 527 aa12.27□□□□□ -0.45
GABRB3-208ENST00000555094 MRE11P49959 708 aa12.27□□□□□ -0.45
GABRB3-208ENST00000555094 IRX3P78415 501 aaPredicted RBP12.27□□□□□ -0.45
GABRB3-208ENST00000555094 SNAPC2Q13487 334 aa12.27□□□□□ -0.45
GABRB3-208ENST00000555094 KARSQ15046 597 aaKnown RBP12.27□□□□□ -0.45
GABRB3-208ENST00000555094 TMEM266Q2M3C6 531 aa12.27□□□□□ -0.45
GABRB3-208ENST00000555094 L1TD1Q5T7N2 865 aaKnown RBP12.27□□□□□ -0.45
GABRB3-208ENST00000555094 CHADLQ6NUI6 762 aa12.27□□□□□ -0.45
GABRB3-208ENST00000555094 PDXDC2PQ6P474 469 aa12.27□□□□□ -0.45
GABRB3-208ENST00000555094 MB21D1Q8N884 522 aa12.27□□□□□ -0.45
GABRB3-208ENST00000555094 SPOCK2Q92563 424 aa12.27□□□□□ -0.45
GABRB3-208ENST00000555094 MMTAG2Q9BU76 263 aaKnown RBP12.27□□□□□ -0.45
GABRB3-208ENST00000555094 PANK2Q9BZ23 570 aa12.27□□□□□ -0.45
GABRB3-208ENST00000555094 ASCC2Q9H1I8 757 aaPredicted RBP12.27□□□□□ -0.45
GABRB3-208ENST00000555094 MAP3K20Q9NYL2 800 aaKnown RBP12.27□□□□□ -0.45
GABRB3-208ENST00000555094 KIAA1468Q9P260 1216 aa12.27□□□□□ -0.45
GABRB3-208ENST00000555094 TBX3O15119 743 aa12.26□□□□□ -0.45
GABRB3-208ENST00000555094 CNMDO75829 334 aa12.26□□□□□ -0.45
GABRB3-208ENST00000555094 ECM2O94769 699 aaPredicted RBP12.26□□□□□ -0.45
GABRB3-208ENST00000555094 PRR29P0C7W0 189 aa12.26□□□□□ -0.45
GABRB3-208ENST00000555094 TECP42680 631 aa12.26□□□□□ -0.45
GABRB3-208ENST00000555094 HERVK_113P62684 666 aa12.26□□□□□ -0.45
GABRB3-208ENST00000555094 RPS6P62753 249 aaKnown RBP12.26□□□□□ -0.45
GABRB3-208ENST00000555094 UBXN2AP68543 259 aa12.26□□□□□ -0.45
GABRB3-208ENST00000555094 MDM2Q00987 491 aaPredicted RBP12.26□□□□□ -0.45
GABRB3-208ENST00000555094 PNOCQ13519 176 aa12.26□□□□□ -0.45
GABRB3-208ENST00000555094 STX1AQ16623 288 aa12.26□□□□□ -0.45
GABRB3-208ENST00000555094 PRR16Q569H4 304 aa12.26□□□□□ -0.45
GABRB3-208ENST00000555094 SASS6Q6UVJ0 657 aa12.26□□□□□ -0.45
GABRB3-208ENST00000555094 FASTKD5Q7L8L6 764 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms