RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 MYL3P08590 195 aa18.36■□□□□ 0.53
ARHGEF40-205ENST00000555052 MYH6P13533 1939 aa18.36■□□□□ 0.53
ARHGEF40-205ENST00000555052 RAB30Q15771 203 aa18.36■□□□□ 0.53
ARHGEF40-205ENST00000555052 OTOP2Q7RTS6 562 aa18.36■□□□□ 0.53
ARHGEF40-205ENST00000555052 ENAHQ8N8S7 591 aaPredicted RBP18.36■□□□□ 0.53
ARHGEF40-205ENST00000555052 EXOC6Q8TAG9 804 aa18.36■□□□□ 0.53
ARHGEF40-205ENST00000555052 COPS5Q92905 334 aa18.36■□□□□ 0.53
ARHGEF40-205ENST00000555052 ZSCAN10Q96SZ4 725 aaPredicted RBP18.36■□□□□ 0.53
ARHGEF40-205ENST00000555052 MPHOSPH6Q99547 160 aaKnown RBP18.36■□□□□ 0.53
ARHGEF40-205ENST00000555052 TET1Q8NFU7 2136 aa18.35■□□□□ 0.53
ARHGEF40-205ENST00000555052 SCN5AQ14524 2016 aa18.35■□□□□ 0.53
ARHGEF40-205ENST00000555052 ABCB11O95342 1321 aa18.35■□□□□ 0.53
ARHGEF40-205ENST00000555052 RAD50Q92878 1312 aa18.35■□□□□ 0.53
ARHGEF40-205ENST00000555052 SUPT20HL2P0C7V6 817 aa18.35■□□□□ 0.53
ARHGEF40-205ENST00000555052 CYP2C9P11712 490 aa18.35■□□□□ 0.53
ARHGEF40-205ENST00000555052 NBPF20Q3BBV1 942 aa18.35■□□□□ 0.53
ARHGEF40-205ENST00000555052 ASPRV1Q53RT3 343 aa18.35■□□□□ 0.53
ARHGEF40-205ENST00000555052 CCDC62Q6P9F0 684 aa18.35■□□□□ 0.53
ARHGEF40-205ENST00000555052 ADGRF4Q8IZF3 695 aa18.35■□□□□ 0.53
ARHGEF40-205ENST00000555052 TBC1D5Q92609 795 aa18.35■□□□□ 0.53
ARHGEF40-205ENST00000555052 SCLYQ96I15 445 aa18.35■□□□□ 0.53
ARHGEF40-205ENST00000555052 IL25Q9H293 177 aa18.35■□□□□ 0.53
ARHGEF40-205ENST00000555052 PRDM12Q9H4Q4 367 aa18.35■□□□□ 0.53
ARHGEF40-205ENST00000555052 KAT14Q9H8E8 782 aa18.35■□□□□ 0.53
ARHGEF40-205ENST00000555052 ZSWIM5Q9P217 1185 aa18.35■□□□□ 0.53
ARHGEF40-205ENST00000555052 COL20A1Q9P218 1284 aa18.35■□□□□ 0.53
ARHGEF40-205ENST00000555052 MSRAQ9UJ68 235 aa18.35■□□□□ 0.53
ARHGEF40-205ENST00000555052 YBX2Q9Y2T7 364 aaKnown RBP18.35■□□□□ 0.53
ARHGEF40-205ENST00000555052 B4DLN1 442 aa18.34■□□□□ 0.53
ARHGEF40-205ENST00000555052 KPNA6O60684 536 aa18.34■□□□□ 0.53
ARHGEF40-205ENST00000555052 TXNP10599 105 aaKnown RBP18.34■□□□□ 0.53
ARHGEF40-205ENST00000555052 MRPL12P52815 198 aaKnown RBP18.34■□□□□ 0.53
ARHGEF40-205ENST00000555052 IMMTQ16891 758 aaKnown RBP18.34■□□□□ 0.53
ARHGEF40-205ENST00000555052 BRDTQ58F21 947 aaPredicted RBP18.34■□□□□ 0.53
ARHGEF40-205ENST00000555052 NFRKBQ6P4R8 1299 aa18.34■□□□□ 0.53
ARHGEF40-205ENST00000555052 RPUSD2Q8IZ73 545 aaKnown RBP18.34■□□□□ 0.53
ARHGEF40-205ENST00000555052 SYTL5Q8TDW5 730 aaPredicted RBP18.34■□□□□ 0.53
ARHGEF40-205ENST00000555052 GPHNQ9NQX3 736 aaPredicted RBP18.34■□□□□ 0.53
ARHGEF40-205ENST00000555052 KIAA1217Q5T5P2 1943 aa18.33■□□□□ 0.53
ARHGEF40-205ENST00000555052 TANC1Q9C0D5 1861 aa18.33■□□□□ 0.53
ARHGEF40-205ENST00000555052 PRRC2BQ5JSZ5 2229 aaKnown RBP18.33■□□□□ 0.53
ARHGEF40-205ENST00000555052 PFKMP08237 780 aa18.33■□□□□ 0.52
ARHGEF40-205ENST00000555052 ADGRE1Q14246 886 aa18.33■□□□□ 0.52
ARHGEF40-205ENST00000555052 TTLL4Q14679 1199 aa18.33■□□□□ 0.52
ARHGEF40-205ENST00000555052 QRICH1Q2TAL8 776 aa18.33■□□□□ 0.52
ARHGEF40-205ENST00000555052 GAS2L1Q99501 681 aaPredicted RBP18.33■□□□□ 0.52
ARHGEF40-205ENST00000555052 NKX2-4Q9H2Z4 354 aa18.33■□□□□ 0.52
ARHGEF40-205ENST00000555052 PTPN11Q06124 597 aaPredicted RBP18.32■□□□□ 0.52
ARHGEF40-205ENST00000555052 YTHDC1Q96MU7 727 aaKnown RBP18.32■□□□□ 0.52
ARHGEF40-205ENST00000555052 TAAR1Q96RJ0 339 aa18.32■□□□□ 0.52
ARHGEF40-205ENST00000555052 KRT23Q9C075 422 aa18.32■□□□□ 0.52
ARHGEF40-205ENST00000555052 CNNM2Q9H8M5 875 aa18.32■□□□□ 0.52
ARHGEF40-205ENST00000555052 JMJD4Q9H9V9 463 aa18.32■□□□□ 0.52
ARHGEF40-205ENST00000555052 CTNNA3Q9UI47 895 aa18.32■□□□□ 0.52
ARHGEF40-205ENST00000555052 SLC4A7Q9Y6M7 1214 aa18.32■□□□□ 0.52
ARHGEF40-205ENST00000555052 BRWD1Q9NSI6 2320 aa18.32■□□□□ 0.52
ARHGEF40-205ENST00000555052 BAZ2BQ9UIF8 2168 aaKnown RBP18.31■□□□□ 0.52
ARHGEF40-205ENST00000555052 PITPNM1O00562 1244 aa18.31■□□□□ 0.52
ARHGEF40-205ENST00000555052 PARP1P09874 1014 aaKnown RBP18.31■□□□□ 0.52
ARHGEF40-205ENST00000555052 ARHGAP1Q07960 439 aa18.31■□□□□ 0.52
ARHGEF40-205ENST00000555052 FAM47CQ5HY64 1035 aa18.31■□□□□ 0.52
ARHGEF40-205ENST00000555052 MCF2L2Q86YR7 1114 aa18.31■□□□□ 0.52
ARHGEF40-205ENST00000555052 NSUN6Q8TEA1 469 aaKnown RBP18.31■□□□□ 0.52
ARHGEF40-205ENST00000555052 PPP1R13LQ8WUF5 828 aa18.31■□□□□ 0.52
ARHGEF40-205ENST00000555052 IWS1Q96ST2 819 aa18.31■□□□□ 0.52
ARHGEF40-205ENST00000555052 TRIP12Q14669 1992 aaPredicted RBP18.31■□□□□ 0.52
ARHGEF40-205ENST00000555052 OPLAHO14841 1288 aa18.3■□□□□ 0.52
ARHGEF40-205ENST00000555052 MMP3P08254 477 aa18.3■□□□□ 0.52
ARHGEF40-205ENST00000555052 RFC2P35250 354 aa18.3■□□□□ 0.52
ARHGEF40-205ENST00000555052 RABGGTBP53611 331 aa18.3■□□□□ 0.52
ARHGEF40-205ENST00000555052 GHRHRQ02643 423 aa18.3■□□□□ 0.52
ARHGEF40-205ENST00000555052 SEC23AQ15436 765 aa18.3■□□□□ 0.52
ARHGEF40-205ENST00000555052 FBXO11Q86XK2 927 aa18.3■□□□□ 0.52
ARHGEF40-205ENST00000555052 AFG1LQ8WV93 481 aa18.3■□□□□ 0.52
ARHGEF40-205ENST00000555052 MTMR8Q96EF0 704 aa18.3■□□□□ 0.52
ARHGEF40-205ENST00000555052 RMDN3Q96TC7 470 aa18.3■□□□□ 0.52
ARHGEF40-205ENST00000555052 UBAC1Q9BSL1 405 aa18.3■□□□□ 0.52
ARHGEF40-205ENST00000555052 SLC28A3Q9HAS3 691 aa18.3■□□□□ 0.52
ARHGEF40-205ENST00000555052 PRDM6Q9NQX0 595 aa18.3■□□□□ 0.52
ARHGEF40-205ENST00000555052 MRPL11Q9Y3B7 192 aaKnown RBP18.3■□□□□ 0.52
ARHGEF40-205ENST00000555052 PCDHA11Q9Y5I1 949 aa18.3■□□□□ 0.52
ARHGEF40-205ENST00000555052 ZBBXA8MT70 800 aa18.29■□□□□ 0.52
ARHGEF40-205ENST00000555052 GH1P01241 217 aa18.29■□□□□ 0.52
ARHGEF40-205ENST00000555052 GSPT1P15170 499 aaKnown RBP18.29■□□□□ 0.52
ARHGEF40-205ENST00000555052 MYOGP15173 224 aa18.29■□□□□ 0.52
ARHGEF40-205ENST00000555052 ATP2A2P16615 1042 aaKnown RBP18.29■□□□□ 0.52
ARHGEF40-205ENST00000555052 PDE4AP27815 886 aa18.29■□□□□ 0.52
ARHGEF40-205ENST00000555052 STXBP2Q15833 593 aa18.29■□□□□ 0.52
ARHGEF40-205ENST00000555052 LY6KQ17RY6 165 aa18.29■□□□□ 0.52
ARHGEF40-205ENST00000555052 TJAP1Q5JTD0 557 aa18.29■□□□□ 0.52
ARHGEF40-205ENST00000555052 SEPT14Q6ZU15 432 aa18.29■□□□□ 0.52
ARHGEF40-205ENST00000555052 DEFB128Q7Z7B8 93 aa18.29■□□□□ 0.52
ARHGEF40-205ENST00000555052 SESTD1Q86VW0 696 aa18.29■□□□□ 0.52
ARHGEF40-205ENST00000555052 STAG2Q8N3U4 1231 aa18.29■□□□□ 0.52
ARHGEF40-205ENST00000555052 KAT2BQ92831 832 aa18.29■□□□□ 0.52
ARHGEF40-205ENST00000555052 CTAGE1Q96RT6 745 aa18.29■□□□□ 0.52
ARHGEF40-205ENST00000555052 DHX16O60231 1041 aaKnown RBP18.28■□□□□ 0.52
ARHGEF40-205ENST00000555052 PPP1R11O60927 126 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF40-205ENST00000555052 IQCF3P0C7M6 154 aa18.28■□□□□ 0.52
ARHGEF40-205ENST00000555052 HSD17B4P51659 736 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms