RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 WNT7AO00755 349 aa17.3■□□□□ 0.36
SYNE3-203ENST00000554873 N4BP3O15049 544 aa17.3■□□□□ 0.36
SYNE3-203ENST00000554873 CYP19A1P11511 503 aaPredicted RBP17.3■□□□□ 0.36
SYNE3-203ENST00000554873 BCAMP50895 628 aa17.3■□□□□ 0.36
SYNE3-203ENST00000554873 RCAN1P53805 252 aa17.3■□□□□ 0.36
SYNE3-203ENST00000554873 SLC7A5Q01650 507 aa17.3■□□□□ 0.36
SYNE3-203ENST00000554873 DPYDQ12882 1025 aa17.3■□□□□ 0.36
SYNE3-203ENST00000554873 HIBCHQ6NVY1 386 aaPredicted RBP17.3■□□□□ 0.36
SYNE3-203ENST00000554873 SPATA4Q8NEY3 305 aa17.3■□□□□ 0.36
SYNE3-203ENST00000554873 UBAC1Q9BSL1 405 aa17.3■□□□□ 0.36
SYNE3-203ENST00000554873 ZBTB1Q9Y2K1 713 aa17.3■□□□□ 0.36
SYNE3-203ENST00000554873 C5orf60A6NFR6 353 aa17.3■□□□□ 0.36
SYNE3-203ENST00000554873 CCT6AP40227 531 aaKnown RBP17.3■□□□□ 0.36
SYNE3-203ENST00000554873 EVA1CP58658 441 aa17.3■□□□□ 0.36
SYNE3-203ENST00000554873 SEC23AQ15436 765 aa17.3■□□□□ 0.36
SYNE3-203ENST00000554873 RNF26Q9BY78 433 aaPredicted RBP17.3■□□□□ 0.36
SYNE3-203ENST00000554873 MYH8P13535 1937 aa17.3■□□□□ 0.36
SYNE3-203ENST00000554873 TIAM2Q8IVF5 1701 aa17.3■□□□□ 0.36
SYNE3-203ENST00000554873 TRAPPC3O43617 180 aa17.29■□□□□ 0.36
SYNE3-203ENST00000554873 COBLO75128 1261 aa17.29■□□□□ 0.36
SYNE3-203ENST00000554873 PRDM1O75626 825 aa17.29■□□□□ 0.36
SYNE3-203ENST00000554873 PPARAQ07869 468 aa17.29■□□□□ 0.36
SYNE3-203ENST00000554873 CWF19L1Q69YN2 538 aaKnown RBP17.29■□□□□ 0.36
SYNE3-203ENST00000554873 CCT6BQ92526 530 aa17.29■□□□□ 0.36
SYNE3-203ENST00000554873 BRINP3Q76B58 766 aa17.29■□□□□ 0.36
SYNE3-203ENST00000554873 ZNF570Q96NI8 536 aa17.29■□□□□ 0.36
SYNE3-203ENST00000554873 GSDMAQ96QA5 445 aa17.29■□□□□ 0.36
SYNE3-203ENST00000554873 PHF20Q9BVI0 1012 aa17.29■□□□□ 0.36
SYNE3-203ENST00000554873 RNF41Q9H4P4 317 aaPredicted RBP17.29■□□□□ 0.36
SYNE3-203ENST00000554873 NOP53Q9NZM5 478 aaKnown RBP17.29■□□□□ 0.36
SYNE3-203ENST00000554873 LIMA1Q9UHB6 759 aaKnown RBP17.29■□□□□ 0.36
SYNE3-203ENST00000554873 SNX12Q9UMY4 172 aa17.29■□□□□ 0.36
SYNE3-203ENST00000554873 MINDY4BA8MYZ0 360 aa17.29■□□□□ 0.36
SYNE3-203ENST00000554873 PPP1R7Q15435 360 aa17.29■□□□□ 0.36
SYNE3-203ENST00000554873 HAUS3Q68CZ6 603 aa17.29■□□□□ 0.36
SYNE3-203ENST00000554873 MREGQ8N565 214 aa17.29■□□□□ 0.36
SYNE3-203ENST00000554873 STAMQ92783 540 aa17.29■□□□□ 0.36
SYNE3-203ENST00000554873 TFR2Q9UP52 801 aa17.29■□□□□ 0.36
SYNE3-203ENST00000554873 PCDHGC5Q9Y5F6 944 aa17.29■□□□□ 0.36
SYNE3-203ENST00000554873 TNKSO95271 1327 aa17.29■□□□□ 0.36
SYNE3-203ENST00000554873 STRCP1A6NGW2 1772 aa17.28■□□□□ 0.36
SYNE3-203ENST00000554873 LRRC10BA6NIK2 292 aa17.28■□□□□ 0.36
SYNE3-203ENST00000554873 PPIP5K2O43314 1243 aa17.28■□□□□ 0.36
SYNE3-203ENST00000554873 ATP2C2O75185 946 aa17.28■□□□□ 0.36
SYNE3-203ENST00000554873 BLMHQ13867 455 aa17.28■□□□□ 0.36
SYNE3-203ENST00000554873 KRT31Q15323 416 aa17.28■□□□□ 0.36
SYNE3-203ENST00000554873 QPCTQ16769 361 aa17.28■□□□□ 0.36
SYNE3-203ENST00000554873 COQ9O75208 318 aa17.28■□□□□ 0.36
SYNE3-203ENST00000554873 FERP16591 822 aa17.28■□□□□ 0.36
SYNE3-203ENST00000554873 KRT2P35908 639 aa17.28■□□□□ 0.36
SYNE3-203ENST00000554873 PDE6BP35913 854 aa17.28■□□□□ 0.36
SYNE3-203ENST00000554873 FUT2Q10981 343 aa17.28■□□□□ 0.36
SYNE3-203ENST00000554873 BYSLQ13895 437 aaKnown RBP17.28■□□□□ 0.36
SYNE3-203ENST00000554873 ZNF174Q15697 407 aa17.28■□□□□ 0.36
SYNE3-203ENST00000554873 LRP2BPQ9P2M1 347 aa17.28■□□□□ 0.36
SYNE3-203ENST00000554873 V9GY48 417 aaPredicted RBP17.28■□□□□ 0.36
SYNE3-203ENST00000554873 XBP1P17861 261 aa17.27■□□□□ 0.36
SYNE3-203ENST00000554873 PAPOLAP51003 745 aaKnown RBP17.27■□□□□ 0.36
SYNE3-203ENST00000554873 ZNF34Q8IZ26 560 aa17.27■□□□□ 0.36
SYNE3-203ENST00000554873 SDR42E1Q8WUS8 393 aa17.27■□□□□ 0.36
SYNE3-203ENST00000554873 PIK3R5Q8WYR1 880 aa17.27■□□□□ 0.36
SYNE3-203ENST00000554873 L3MBTL3Q96JM7 780 aaPredicted RBP17.27■□□□□ 0.36
SYNE3-203ENST00000554873 DOCK2Q92608 1830 aa17.27■□□□□ 0.36
SYNE3-203ENST00000554873 MYH6P13533 1939 aa17.27■□□□□ 0.36
SYNE3-203ENST00000554873 LINGO3P0C6S8 592 aa17.27■□□□□ 0.35
SYNE3-203ENST00000554873 ADGRA1Q86SQ6 560 aa17.27■□□□□ 0.35
SYNE3-203ENST00000554873 FERMT2Q96AC1 680 aa17.27■□□□□ 0.35
SYNE3-203ENST00000554873 KAT6BQ8WYB5 2073 aa17.27■□□□□ 0.35
SYNE3-203ENST00000554873 A6NHS1 94 aa17.26■□□□□ 0.35
SYNE3-203ENST00000554873 PRLRP16471 622 aa17.26■□□□□ 0.35
SYNE3-203ENST00000554873 MRPS25P82663 173 aaKnown RBP17.26■□□□□ 0.35
SYNE3-203ENST00000554873 ROR2Q01974 943 aaKnown RBP17.26■□□□□ 0.35
SYNE3-203ENST00000554873 GKAP1Q5VSY0 366 aaPredicted RBP17.26■□□□□ 0.35
SYNE3-203ENST00000554873 DZIP3Q86Y13 1208 aaKnown RBP17.26■□□□□ 0.35
SYNE3-203ENST00000554873 IFT20Q8IY31 132 aa17.26■□□□□ 0.35
SYNE3-203ENST00000554873 PURBQ96QR8 312 aaKnown RBP17.26■□□□□ 0.35
SYNE3-203ENST00000554873 CTNND2Q9UQB3 1225 aa17.26■□□□□ 0.35
SYNE3-203ENST00000554873 PRPF3O43395 683 aaKnown RBP17.26■□□□□ 0.35
SYNE3-203ENST00000554873 PLEKHA8P1O95397 391 aa17.26■□□□□ 0.35
SYNE3-203ENST00000554873 HPDP32754 393 aaPredicted RBP17.26■□□□□ 0.35
SYNE3-203ENST00000554873 MATR3P43243 847 aaKnown RBP eCLIP17.26■□□□□ 0.35
SYNE3-203ENST00000554873 COPB1P53618 953 aaKnown RBP17.26■□□□□ 0.35
SYNE3-203ENST00000554873 SPAG1Q07617 926 aa17.26■□□□□ 0.35
SYNE3-203ENST00000554873 PPP2R5BQ15173 497 aa17.26■□□□□ 0.35
SYNE3-203ENST00000554873 TSR1Q2NL82 804 aaKnown RBP17.26■□□□□ 0.35
SYNE3-203ENST00000554873 C8orf74Q6P047 294 aa17.26■□□□□ 0.35
SYNE3-203ENST00000554873 ENAHQ8N8S7 591 aaPredicted RBP17.26■□□□□ 0.35
SYNE3-203ENST00000554873 ESR2Q92731 530 aa17.26■□□□□ 0.35
SYNE3-203ENST00000554873 CNKSR1Q969H4 720 aa17.26■□□□□ 0.35
SYNE3-203ENST00000554873 SLC5A4Q9NY91 659 aa17.26■□□□□ 0.35
SYNE3-203ENST00000554873 ERVV-1B6SEH8 477 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 LUC7L3O95232 432 aaKnown RBP17.25■□□□□ 0.35
SYNE3-203ENST00000554873 CYP7A1P22680 504 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 PAK2Q13177 524 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 CCDC63Q8NA47 563 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 DNAJC7Q99615 494 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 LACRTQ9GZZ8 138 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 VPS16Q9H269 839 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 BLZF1Q9H2G9 400 aa17.25■□□□□ 0.35
SYNE3-203ENST00000554873 PAPOLBQ9NRJ5 636 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms