RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 KRT25Q7Z3Z0 450 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 LRRC1Q9BTT6 524 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 NYXQ9GZU5 481 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 NDST4Q9H3R1 872 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 ANAPC4Q9UJX5 808 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 PDE2AO00408 941 aaPredicted RBP13.16□□□□□ -0.3
XRCC3-208ENST00000554811 CHMP2AO43633 222 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 CCT5P48643 541 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 ODF2Q5BJF6 829 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 IQCEQ6IPM2 695 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 WDR66Q8TBY9 1149 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 SELENOOQ9BVL4 669 aa13.16□□□□□ -0.3
XRCC3-208ENST00000554811 TRPM3Q9HCF6 1732 aaPredicted RBP13.16□□□□□ -0.3
XRCC3-208ENST00000554811 STXBP3O00186 592 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 ADCY7P51828 1080 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 SLC30A10Q6XR72 485 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 FAM76AQ8TAV0 307 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 LARP4BQ92615 738 aaKnown RBP13.15□□□□□ -0.3
XRCC3-208ENST00000554811 TNFRSF25Q93038 417 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 NUDT12Q9BQG2 462 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 RAB34Q9BZG1 259 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 BARHL2Q9NY43 387 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 PKD2L1Q9P0L9 805 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 AKAP11Q9UKA4 1901 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 USP17L15C9J2P7 530 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 USP17L13C9JLJ4 530 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 USP17L11C9JVI0 530 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 USP17L18D6R9N7 530 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 USP17L22D6RA61 530 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 USP17L17D6RBQ6 530 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 USP17L19D6RCP7 530 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 USP17L20D6RJB6 530 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 ORC4O43929 436 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 ZNF76P36508 570 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 ZBED6P86452 979 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 USP17L24Q0WX57 530 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 NAA35Q5VZE5 725 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 ARL6IP4Q66PJ3 421 aaKnown RBP13.15□□□□□ -0.3
XRCC3-208ENST00000554811 WDR59Q6PJI9 974 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 USP17L6PQ6QN14 398 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 MAEAQ7L5Y9 396 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 FBXO33Q7Z6M2 555 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 KIAA1024Q9UPX6 916 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 PCDHA13Q9Y5I0 950 aa13.15□□□□□ -0.3
XRCC3-208ENST00000554811 MYMKA6NI61 221 aa13.15□□□□□ -0.31
XRCC3-208ENST00000554811 SLC37A4O43826 429 aa13.15□□□□□ -0.31
XRCC3-208ENST00000554811 PBX1P40424 430 aa13.15□□□□□ -0.31
XRCC3-208ENST00000554811 STAT3P40763 770 aa13.15□□□□□ -0.31
XRCC3-208ENST00000554811 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.15□□□□□ -0.31
XRCC3-208ENST00000554811 SH2D3CQ8N5H7 860 aa13.15□□□□□ -0.31
XRCC3-208ENST00000554811 TAF4BQ92750 862 aa13.15□□□□□ -0.31
XRCC3-208ENST00000554811 DDX12PQ92771 950 aa13.15□□□□□ -0.31
XRCC3-208ENST00000554811 EXOC4Q96A65 974 aa13.15□□□□□ -0.31
XRCC3-208ENST00000554811 ADAMTS1Q9UHI8 967 aa13.15□□□□□ -0.31
XRCC3-208ENST00000554811 DMGDHQ9UI17 866 aaKnown RBP13.15□□□□□ -0.31
XRCC3-208ENST00000554811 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.15□□□□□ -0.31
XRCC3-208ENST00000554811 TAF1P21675 1872 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 ZSCAN5CA6NGD5 496 aaPredicted RBP13.14□□□□□ -0.31
XRCC3-208ENST00000554811 SMIM23A6NLE4 172 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 E9PMD0 336 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 SEMA3EO15041 775 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 SLC1A4P43007 532 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 GSTO1P78417 241 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 GUCY2DQ02846 1103 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 FAM133AQ8N9E0 248 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 LRRC15Q8TF66 581 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 CAPN11Q9UMQ6 739 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 RASA1P20936 1047 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 LIG3P49916 1009 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 USP14P54578 494 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 RNF187Q5TA31 235 aaPredicted RBP13.14□□□□□ -0.31
XRCC3-208ENST00000554811 TTI2Q6NXR4 508 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 FAM196AQ6ZSG2 479 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 DGKHQ86XP1 1220 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 GOLGA5Q8TBA6 731 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 DUSP9Q99956 384 aaKnown RBP13.14□□□□□ -0.31
XRCC3-208ENST00000554811 COL1A1P02452 1464 aaPredicted RBP13.14□□□□□ -0.31
XRCC3-208ENST00000554811 MYH15Q9Y2K3 1946 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 LMTK3Q96Q04 1460 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 SFI1A8K8P3 1242 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 ATP8B1O43520 1251 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 GRM4Q14833 912 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 TBC1D5Q92609 795 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 ARHGEF1Q92888 912 aaKnown RBP13.14□□□□□ -0.31
XRCC3-208ENST00000554811 THAP9Q9H5L6 903 aa13.14□□□□□ -0.31
XRCC3-208ENST00000554811 UBXN2AP68543 259 aa13.13□□□□□ -0.31
XRCC3-208ENST00000554811 RDH13Q8NBN7 331 aa13.13□□□□□ -0.31
XRCC3-208ENST00000554811 FAM71BQ8TC56 605 aa13.13□□□□□ -0.31
XRCC3-208ENST00000554811 HYOU1Q9Y4L1 999 aa13.13□□□□□ -0.31
XRCC3-208ENST00000554811 TJP1Q07157 1748 aa13.13□□□□□ -0.31
XRCC3-208ENST00000554811 HSF2BPO75031 334 aa13.13□□□□□ -0.31
XRCC3-208ENST00000554811 USP8P40818 1118 aa13.13□□□□□ -0.31
XRCC3-208ENST00000554811 GNGT1P63211 74 aa13.13□□□□□ -0.31
XRCC3-208ENST00000554811 PABPC4Q13310 644 aaKnown RBP eCLIP13.13□□□□□ -0.31
XRCC3-208ENST00000554811 KIAA0753Q2KHM9 967 aa13.13□□□□□ -0.31
XRCC3-208ENST00000554811 GIMAP8Q8ND71 665 aaPredicted RBP13.13□□□□□ -0.31
XRCC3-208ENST00000554811 DHTKD1Q96HY7 919 aaPredicted RBP13.13□□□□□ -0.31
XRCC3-208ENST00000554811 KRT12Q99456 494 aa13.13□□□□□ -0.31
XRCC3-208ENST00000554811 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.13□□□□□ -0.31
XRCC3-208ENST00000554811 RCAN1P53805 252 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms