RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 MED1Q15648 1581 aaPredicted RBP5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 ABCC6O95255 1503 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 PXDNQ92626 1479 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 TRAV20A0A0B4J274 112 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 TBX1O43435 398 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 ASPAP45381 313 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 ARMCX6Q7L4S7 300 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 CCDC144CPQ8IYA2 1237 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 SMYD4Q8IYR2 804 aaPredicted RBP5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 AGGF1Q8N302 714 aaeCLIP5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 LRRN4CLQ8ND94 238 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 IP6K1Q92551 441 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 CDC6Q99741 560 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 AARSD1Q9BTE6 412 aaKnown RBP5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 LRP2BPQ9P2M1 347 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 NCAPD2Q15021 1401 aa5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 A0A087X0B3 334 aa5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 SPDYE3A6NKU9 549 aa5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 SHOXO15266 292 aa5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 MYCLP1P12525 358 aaPredicted RBP5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 POU3F3P20264 500 aaPredicted RBP5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 GMPRP36959 345 aa5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 GRIA2P42262 883 aa5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 ALDH1L2Q3SY69 923 aa5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 FDX2Q6P4F2 183 aa5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 LINC00114Q6XXX2 140 aa5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 KRT28Q7Z3Y7 464 aa5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 DNAJB8Q8NHS0 232 aa5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 CLUHP3Q96NS8 147 aa5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 DHRS4Q9BTZ2 278 aa5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 PLVAPQ9BX97 442 aa5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 MKRN2Q9H000 416 aaKnown RBP5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 METTL14Q9HCE5 456 aaKnown RBP5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 SSU72Q9NP77 194 aaKnown RBP5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 ZNF451Q9Y4E5 1061 aa5.9□□□□□ -1.46
PPP4R3A-204ENST00000554574 ABCA3Q99758 1704 aa5.9□□□□□ -1.47
PPP4R3A-204ENST00000554574 NPHP3Q7Z494 1330 aa5.9□□□□□ -1.47
PPP4R3A-204ENST00000554574 KIF16BQ96L93 1317 aa5.9□□□□□ -1.47
PPP4R3A-204ENST00000554574 CCDC163A0A0D9SF12 145 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 RFPL3O75679 317 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 GCP02774 474 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 SNRPNP63162 240 aaKnown RBP5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 HSP90AA2PQ14568 343 aaPredicted RBP5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 NBPF12Q5TAG4 269 aaPredicted RBP5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 IGF2-ASQ6U949 168 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 ARHGEF25Q86VW2 580 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 JAMLQ86YT9 394 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 FRAT1Q92837 279 aaPredicted RBP5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 THUMPD2Q9BTF0 503 aaKnown RBP5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 MRPL18Q9H0U6 180 aaKnown RBP5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 IRF2BPLQ9H1B7 796 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 NHSL1Q5SYE7 1610 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 TNS3Q68CZ2 1445 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 SIPA1L3O60292 1781 aaPredicted RBP5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 KDM3BQ7LBC6 1761 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 TRBV23-1A0A0A0MS06 115 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 KRBA1A5PL33 1030 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 FAM83GA6ND36 823 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 RBAK-RBAKDNI3L0D1 243 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 PLD2O14939 933 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 HTATSF1O43719 755 aaKnown RBP5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 LRIG2O94898 1065 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 CAPNS1P04632 268 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 CNGA1P29973 690 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 STAT3P40763 770 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 ZKSCAN2Q63HK3 967 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 ADAT2Q7Z6V5 191 aaKnown RBP5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 NEDD1Q8NHV4 660 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 SSH1Q8WYL5 1049 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 SMC4Q9NTJ3 1288 aa5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 N4BP2Q86UW6 1770 aaPredicted RBP5.89□□□□□ -1.47
PPP4R3A-204ENST00000554574 CRB1P82279 1406 aa5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 KIAA0232Q92628 1395 aa5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 ADAMTS7Q9UKP4 1686 aa5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 PDE8AO60658 829 aa5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 CD247P20963 164 aa5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 PREPP48147 710 aa5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 CDKN1CP49918 316 aaPredicted RBP5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 MTHFSDQ2M296 383 aaKnown RBP5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 ZNF385CQ66K41 422 aaPredicted RBP5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 ANKRD34AQ69YU3 496 aa5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 SHISA2Q6UWI4 295 aa5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 CENPQQ7L2Z9 268 aaPredicted RBP5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 ADCY4Q8NFM4 1077 aa5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 PANK1Q8TE04 598 aa5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 CHAC2Q8WUX2 184 aa5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 OSBP2Q969R2 916 aa5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 VWCEQ96DN2 955 aa5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 KREMEN1Q96MU8 473 aa5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 GBP3Q9H0R5 595 aa5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 PCOLCE2Q9UKZ9 415 aa5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 SUGT1Q9Y2Z0 365 aa5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 LAS1LQ9Y4W2 734 aaKnown RBP5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 SCN11AQ9UI33 1791 aa5.88□□□□□ -1.47
PPP4R3A-204ENST00000554574 F8W735 103 aaPredicted RBP5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 CHL1O00533 1208 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 IPO8O15397 1037 aaKnown RBP5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 PRODHO43272 600 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 KCNQ2O43526 872 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms