RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 PUS3Q9BZE2 481 aaKnown RBP12.38□□□□□ -0.43
NUMB-212ENST00000554546 TROVE2P10155 538 aaKnown RBP eCLIP12.38□□□□□ -0.43
NUMB-212ENST00000554546 STIP1P31948 543 aaKnown RBP12.38□□□□□ -0.43
NUMB-212ENST00000554546 CEBPAP49715 358 aaPredicted RBP12.38□□□□□ -0.43
NUMB-212ENST00000554546 MAGOHP61326 146 aaKnown RBP12.38□□□□□ -0.43
NUMB-212ENST00000554546 RNASELQ05823 741 aaKnown RBP12.38□□□□□ -0.43
NUMB-212ENST00000554546 RCN1Q15293 331 aa12.38□□□□□ -0.43
NUMB-212ENST00000554546 ZC2HC1CQ53FD0 456 aaPredicted RBP12.38□□□□□ -0.43
NUMB-212ENST00000554546 TMCO5AQ8N6Q1 288 aa12.38□□□□□ -0.43
NUMB-212ENST00000554546 MAGOHBQ96A72 148 aaKnown RBP12.38□□□□□ -0.43
NUMB-212ENST00000554546 POLR3CQ9BUI4 534 aaPredicted RBP12.38□□□□□ -0.43
NUMB-212ENST00000554546 OSBPL10Q9BXB5 764 aa12.38□□□□□ -0.43
NUMB-212ENST00000554546 FAM192AQ9GZU8 254 aa12.38□□□□□ -0.43
NUMB-212ENST00000554546 AFF2P51816 1311 aa12.38□□□□□ -0.43
NUMB-212ENST00000554546 SYNRGQ9UMZ2 1314 aa12.38□□□□□ -0.43
NUMB-212ENST00000554546 MADDQ8WXG6 1647 aa12.38□□□□□ -0.43
NUMB-212ENST00000554546 DCDC2CA8MYV0 355 aa12.38□□□□□ -0.43
NUMB-212ENST00000554546 YEATS4O95619 227 aa12.38□□□□□ -0.43
NUMB-212ENST00000554546 BAG3O95817 575 aa12.38□□□□□ -0.43
NUMB-212ENST00000554546 GSTM4Q03013 218 aa12.38□□□□□ -0.43
NUMB-212ENST00000554546 LSAMPQ13449 338 aa12.38□□□□□ -0.43
NUMB-212ENST00000554546 TSR1Q2NL82 804 aaKnown RBP12.38□□□□□ -0.43
NUMB-212ENST00000554546 SAMD3Q8N6K7 520 aa12.38□□□□□ -0.43
NUMB-212ENST00000554546 DEPTORQ8TB45 409 aa12.38□□□□□ -0.43
NUMB-212ENST00000554546 HAUS1Q96CS2 278 aa12.38□□□□□ -0.43
NUMB-212ENST00000554546 IFT74Q96LB3 600 aa12.38□□□□□ -0.43
NUMB-212ENST00000554546 RNPEPL1Q9HAU8 725 aa12.38□□□□□ -0.43
NUMB-212ENST00000554546 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.38□□□□□ -0.43
NUMB-212ENST00000554546 HSFX1Q9UBD0 423 aa12.38□□□□□ -0.43
NUMB-212ENST00000554546 CD2APQ9Y5K6 639 aa12.38□□□□□ -0.43
NUMB-212ENST00000554546 CTDNEP1O95476 244 aa12.37□□□□□ -0.43
NUMB-212ENST00000554546 ITGA2BP08514 1039 aa12.37□□□□□ -0.43
NUMB-212ENST00000554546 CCT6AP40227 531 aaKnown RBP12.37□□□□□ -0.43
NUMB-212ENST00000554546 ITIH4Q14624 930 aa12.37□□□□□ -0.43
NUMB-212ENST00000554546 RBM26Q5T8P6 1007 aaKnown RBP12.37□□□□□ -0.43
NUMB-212ENST00000554546 RUBCNQ92622 972 aa12.37□□□□□ -0.43
NUMB-212ENST00000554546 AZIN2Q96A70 460 aa12.37□□□□□ -0.43
NUMB-212ENST00000554546 DDX50Q9BQ39 737 aaKnown RBP12.37□□□□□ -0.43
NUMB-212ENST00000554546 TMED5Q9Y3A6 229 aa12.37□□□□□ -0.43
NUMB-212ENST00000554546 MAGEB3O15480 346 aa12.37□□□□□ -0.43
NUMB-212ENST00000554546 KRT86O43790 486 aa12.37□□□□□ -0.43
NUMB-212ENST00000554546 MTTPP55157 894 aa12.37□□□□□ -0.43
NUMB-212ENST00000554546 ZNF362Q5T0B9 420 aaPredicted RBP12.37□□□□□ -0.43
NUMB-212ENST00000554546 CYP4X1Q8N118 509 aa12.37□□□□□ -0.43
NUMB-212ENST00000554546 C1orf131Q8NDD1 294 aaKnown RBP12.37□□□□□ -0.43
NUMB-212ENST00000554546 LENG1Q96BZ8 264 aaPredicted RBP12.37□□□□□ -0.43
NUMB-212ENST00000554546 SPATA16Q9BXB7 569 aa12.37□□□□□ -0.43
NUMB-212ENST00000554546 LUC7LQ9NQ29 371 aaKnown RBP12.37□□□□□ -0.43
NUMB-212ENST00000554546 DUSP10Q9Y6W6 482 aa12.37□□□□□ -0.43
NUMB-212ENST00000554546 TUBGCP6Q96RT7 1819 aa12.37□□□□□ -0.43
NUMB-212ENST00000554546 ALDH1L1O75891 902 aa12.37□□□□□ -0.43
NUMB-212ENST00000554546 HEXIM1O94992 359 aaKnown RBP12.37□□□□□ -0.43
NUMB-212ENST00000554546 MMEP08473 750 aa12.37□□□□□ -0.43
NUMB-212ENST00000554546 PTDSS1P48651 473 aaKnown RBP12.37□□□□□ -0.43
NUMB-212ENST00000554546 NMIQ13287 307 aaPredicted RBP12.37□□□□□ -0.43
NUMB-212ENST00000554546 CXorf38Q8TB03 319 aa12.37□□□□□ -0.43
NUMB-212ENST00000554546 MED15Q96RN5 788 aa12.37□□□□□ -0.43
NUMB-212ENST00000554546 MAN1B1Q9UKM7 699 aa12.37□□□□□ -0.43
NUMB-212ENST00000554546 HEY1Q9Y5J3 304 aa12.37□□□□□ -0.43
NUMB-212ENST00000554546 MAGEA13PA6NCF6 341 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 PRC1O43663 620 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 GLRX3O76003 335 aaKnown RBP12.36□□□□□ -0.43
NUMB-212ENST00000554546 PAEPP09466 180 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 HOXA10P31260 410 aaPredicted RBP12.36□□□□□ -0.43
NUMB-212ENST00000554546 COPS2P61201 443 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 IGBP1P78318 339 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 CLPPQ16740 277 aaPredicted RBP12.36□□□□□ -0.43
NUMB-212ENST00000554546 ZNF394Q53GI3 561 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 DAAM2Q86T65 1068 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 ZC3H18Q86VM9 953 aaKnown RBP12.36□□□□□ -0.43
NUMB-212ENST00000554546 LRRC34Q8IZ02 419 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 FAM136AQ96C01 138 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 LACRTQ9GZZ8 138 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 RAB17Q9H0T7 212 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 ALDH8A1Q9H2A2 487 aaPredicted RBP12.36□□□□□ -0.43
NUMB-212ENST00000554546 SLC4A7Q9Y6M7 1214 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 ASLP04424 464 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 TRADDQ15628 312 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 TTC30AQ86WT1 665 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 WDR75Q8IWA0 830 aaKnown RBP12.36□□□□□ -0.43
NUMB-212ENST00000554546 NEK1Q96PY6 1258 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 DUSP9Q99956 384 aaKnown RBP12.36□□□□□ -0.43
NUMB-212ENST00000554546 ARHGEF3Q9NR81 526 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 ATP8A2Q9NTI2 1148 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 POLR3EQ9NVU0 708 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 CTTNBP2NLQ9P2B4 639 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 RIMS2Q9UQ26 1411 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 SMIM23A6NLE4 172 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 ATP9AO75110 1047 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 ZCCHC18P0CG32 403 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 TPBGLP0DKB5 382 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 CTNNA1P35221 906 aaKnown RBP12.36□□□□□ -0.43
NUMB-212ENST00000554546 HERVK_113P62684 666 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 CFAP157Q5JU67 520 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 STK32AQ8WU08 396 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 NUDCD1Q96RS6 583 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 LLPHQ9BRT6 129 aaKnown RBP12.36□□□□□ -0.43
NUMB-212ENST00000554546 TIPINQ9BVW5 301 aa12.36□□□□□ -0.43
NUMB-212ENST00000554546 ADD3Q9UEY8 706 aaKnown RBP12.36□□□□□ -0.43
NUMB-212ENST00000554546 SNX12Q9UMY4 172 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms