RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 AMPD3Q01432 767 aa13.66□□□□□ -0.22
LRP1-207ENST00000554174 PPP2R3AQ06190 1150 aa13.66□□□□□ -0.22
LRP1-207ENST00000554174 USP17L24Q0WX57 530 aa13.66□□□□□ -0.22
LRP1-207ENST00000554174 MIIPQ5JXC2 388 aa13.66□□□□□ -0.22
LRP1-207ENST00000554174 PPP4R3AQ6IN85 833 aa13.66□□□□□ -0.22
LRP1-207ENST00000554174 PPP1R18Q6NYC8 613 aa13.66□□□□□ -0.22
LRP1-207ENST00000554174 WDR59Q6PJI9 974 aa13.66□□□□□ -0.22
LRP1-207ENST00000554174 USP17L6PQ6QN14 398 aa13.66□□□□□ -0.22
LRP1-207ENST00000554174 C2CD5Q86YS7 1000 aa13.66□□□□□ -0.22
LRP1-207ENST00000554174 SNX29Q8TEQ0 813 aa13.66□□□□□ -0.22
LRP1-207ENST00000554174 LARP4BQ92615 738 aaKnown RBP13.66□□□□□ -0.22
LRP1-207ENST00000554174 CUL5Q93034 780 aa13.66□□□□□ -0.22
LRP1-207ENST00000554174 CNOT6LQ96LI5 555 aaKnown RBP13.66□□□□□ -0.22
LRP1-207ENST00000554174 TMX4Q9H1E5 349 aaPredicted RBP13.66□□□□□ -0.22
LRP1-207ENST00000554174 AGPAT5Q9NUQ2 364 aa13.66□□□□□ -0.22
LRP1-207ENST00000554174 MAGEC2Q9UBF1 373 aaPredicted RBP13.66□□□□□ -0.22
LRP1-207ENST00000554174 DDX25Q9UHL0 483 aaKnown RBP13.66□□□□□ -0.22
LRP1-207ENST00000554174 REXO2Q9Y3B8 237 aaKnown RBP13.66□□□□□ -0.22
LRP1-207ENST00000554174 ARFGEF1Q9Y6D6 1849 aa13.66□□□□□ -0.22
LRP1-207ENST00000554174 ZNF646O15015 1829 aaPredicted RBP13.65□□□□□ -0.22
LRP1-207ENST00000554174 ECE2O60344 883 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 TFRCP02786 760 aaKnown RBP13.65□□□□□ -0.22
LRP1-207ENST00000554174 PDIA5Q14554 519 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 TMEM266Q2M3C6 531 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 QRICH1Q2TAL8 776 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 ZNF569Q5MCW4 686 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 GLIS3Q8NEA6 775 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 RAD54LQ92698 747 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 STK17AQ9UEE5 414 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 ATF5Q9Y2D1 282 aaPredicted RBP13.65□□□□□ -0.22
LRP1-207ENST00000554174 CHRNA5P30532 468 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 SNAP25P60880 206 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 SEPT2Q15019 361 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 CERKLQ49MI3 558 aaPredicted RBP13.65□□□□□ -0.22
LRP1-207ENST00000554174 STRIP1Q5VSL9 837 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 CNNM4Q6P4Q7 775 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 ZSCAN29Q8IWY8 852 aaPredicted RBP13.65□□□□□ -0.22
LRP1-207ENST00000554174 OR8K1Q8NGG5 319 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 CCDC17Q96LX7 622 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 DNAJC7Q99615 494 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 TTYH3Q9C0H2 523 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 TRIM10Q9UDY6 481 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 CAPN11Q9UMQ6 739 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 TFR2Q9UP52 801 aa13.65□□□□□ -0.22
LRP1-207ENST00000554174 LUC7L2Q9Y383 392 aaKnown RBP13.65□□□□□ -0.22
LRP1-207ENST00000554174 BICDL2A1A5D9 508 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 KIF5CO60282 957 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 GDF11O95390 407 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 SLC1A4P43007 532 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 DNM2P50570 870 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 MRPL12P52815 198 aaKnown RBP13.64□□□□□ -0.23
LRP1-207ENST00000554174 JAG1P78504 1218 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 TMEM119Q4V9L6 283 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 KRT79Q5XKE5 535 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 CENPPQ6IPU0 288 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 UNC13DQ70J99 1090 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 SLC35F6Q8N357 371 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 NOC3LQ8WTT2 800 aaKnown RBP13.64□□□□□ -0.23
LRP1-207ENST00000554174 DDX12PQ92771 950 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 CCDC47Q96A33 483 aaKnown RBP13.64□□□□□ -0.23
LRP1-207ENST00000554174 CDK5RAP3Q96JB5 506 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 P2RX7Q99572 595 aaKnown RBP13.64□□□□□ -0.23
LRP1-207ENST00000554174 PI4KBQ9UBF8 816 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 ZSCAN20P17040 1043 aaPredicted RBP13.64□□□□□ -0.23
LRP1-207ENST00000554174 TAL1P17542 331 aaPredicted RBP13.64□□□□□ -0.23
LRP1-207ENST00000554174 TBC1D8BQ0IIM8 1120 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 AOC3Q16853 763 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 COBLL1Q53SF7 1204 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 SLFN13Q68D06 897 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 RSRC2Q7L4I2 434 aaKnown RBP13.64□□□□□ -0.23
LRP1-207ENST00000554174 MKL1Q969V6 931 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 IDI2Q9BXS1 227 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 DHX36Q9H2U1 1008 aaKnown RBP13.64□□□□□ -0.23
LRP1-207ENST00000554174 ZSWIM4Q9H7M6 989 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 FAM53CQ9NYF3 392 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 PCDHA1Q9Y5I3 950 aa13.64□□□□□ -0.23
LRP1-207ENST00000554174 EPN1Q9Y6I3 576 aaPredicted RBP13.64□□□□□ -0.23
LRP1-207ENST00000554174 PVALEFA0A1B0GWK0 134 aa13.63□□□□□ -0.23
LRP1-207ENST00000554174 NDUFA10O95299 355 aa13.63□□□□□ -0.23
LRP1-207ENST00000554174 IDEP14735 1019 aa13.63□□□□□ -0.23
LRP1-207ENST00000554174 MTIF2P46199 727 aaKnown RBP13.63□□□□□ -0.23
LRP1-207ENST00000554174 LRRC41Q15345 812 aa13.63□□□□□ -0.23
LRP1-207ENST00000554174 CDC37Q16543 378 aaPredicted RBP13.63□□□□□ -0.23
LRP1-207ENST00000554174 TATDN1Q6P1N9 297 aa13.63□□□□□ -0.23
LRP1-207ENST00000554174 SMAP1Q8IYB5 467 aaPredicted RBP13.63□□□□□ -0.23
LRP1-207ENST00000554174 NOC4LQ9BVI4 516 aaKnown RBP13.63□□□□□ -0.23
LRP1-207ENST00000554174 RAB34Q9BZG1 259 aa13.63□□□□□ -0.23
LRP1-207ENST00000554174 KANSL2Q9H9L4 492 aa13.63□□□□□ -0.23
LRP1-207ENST00000554174 ERCC3P19447 782 aa13.62□□□□□ -0.23
LRP1-207ENST00000554174 EHHADHQ08426 723 aa13.62□□□□□ -0.23
LRP1-207ENST00000554174 TEX35Q5T0J7 233 aa13.62□□□□□ -0.23
LRP1-207ENST00000554174 MRIQ9BWK5 157 aa13.62□□□□□ -0.23
LRP1-207ENST00000554174 TDRD3Q9H7E2 651 aaKnown RBP13.62□□□□□ -0.23
LRP1-207ENST00000554174 NYAP2Q9P242 653 aa13.62□□□□□ -0.23
LRP1-207ENST00000554174 PCDHA12Q9UN75 941 aa13.62□□□□□ -0.23
LRP1-207ENST00000554174 H0YIN7 160 aa13.62□□□□□ -0.23
LRP1-207ENST00000554174 MEIS2O14770 477 aa13.62□□□□□ -0.23
LRP1-207ENST00000554174 TRIM21P19474 475 aaKnown RBP13.62□□□□□ -0.23
LRP1-207ENST00000554174 RRP1BQ14684 758 aaKnown RBP13.62□□□□□ -0.23
LRP1-207ENST00000554174 DNAJC19Q96DA6 116 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms