RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 VPS53Q5VIR6 699 aa20.85■□□□□ 0.93
SYNE2-211ENST00000553801 SLC30A10Q6XR72 485 aa20.85■□□□□ 0.93
SYNE2-211ENST00000553801 EVI5LQ96CN4 794 aa20.85■□□□□ 0.93
SYNE2-211ENST00000553801 CHD7Q9P2D1 2997 aa20.85■□□□□ 0.93
SYNE2-211ENST00000553801 COG5Q9UP83 839 aa20.85■□□□□ 0.93
SYNE2-211ENST00000553801 WDR19Q8NEZ3 1342 aa20.84■□□□□ 0.93
SYNE2-211ENST00000553801 BDP1A6H8Y1 2624 aa20.84■□□□□ 0.93
SYNE2-211ENST00000553801 RFXAPO00287 272 aa20.84■□□□□ 0.93
SYNE2-211ENST00000553801 TXNP10599 105 aaKnown RBP20.84■□□□□ 0.93
SYNE2-211ENST00000553801 EDNRBP24530 442 aa20.84■□□□□ 0.93
SYNE2-211ENST00000553801 CCDC155Q8N6L0 562 aa20.84■□□□□ 0.93
SYNE2-211ENST00000553801 TTC14Q96N46 770 aa20.84■□□□□ 0.93
SYNE2-211ENST00000553801 CERS4Q9HA82 394 aa20.84■□□□□ 0.93
SYNE2-211ENST00000553801 BAIAP3O94812 1187 aa20.83■□□□□ 0.93
SYNE2-211ENST00000553801 FGAP02671 866 aa20.83■□□□□ 0.93
SYNE2-211ENST00000553801 PDHBP11177 359 aa20.83■□□□□ 0.93
SYNE2-211ENST00000553801 HERC6Q8IVU3 1022 aa20.83■□□□□ 0.93
SYNE2-211ENST00000553801 NECAB3Q96P71 396 aaPredicted RBP20.83■□□□□ 0.93
SYNE2-211ENST00000553801 RAPGEFL1Q9UHV5 662 aa20.83■□□□□ 0.93
SYNE2-211ENST00000553801 PCDHB15Q9Y5E8 787 aa20.83■□□□□ 0.93
SYNE2-211ENST00000553801 KCNJ6P48051 423 aa20.82■□□□□ 0.92
SYNE2-211ENST00000553801 TAP1Q03518 808 aa20.82■□□□□ 0.92
SYNE2-211ENST00000553801 ZNF543Q08ER8 600 aa20.82■□□□□ 0.92
SYNE2-211ENST00000553801 RGS22Q8NE09 1264 aa20.82■□□□□ 0.92
SYNE2-211ENST00000553801 ARNTL2Q8WYA1 636 aa20.82■□□□□ 0.92
SYNE2-211ENST00000553801 COPS5Q92905 334 aa20.82■□□□□ 0.92
SYNE2-211ENST00000553801 MAF1Q9H063 256 aa20.82■□□□□ 0.92
SYNE2-211ENST00000553801 PCP11498 1178 aaKnown RBP20.81■□□□□ 0.92
SYNE2-211ENST00000553801 KCNQ1P51787 676 aa20.81■□□□□ 0.92
SYNE2-211ENST00000553801 MCMDC2Q4G0Z9 681 aa20.81■□□□□ 0.92
SYNE2-211ENST00000553801 TICAM2Q86XR7 235 aa20.81■□□□□ 0.92
SYNE2-211ENST00000553801 CAGE1Q8TC20 777 aa20.81■□□□□ 0.92
SYNE2-211ENST00000553801 FAM122AQ96E09 287 aa20.81■□□□□ 0.92
SYNE2-211ENST00000553801 TRIP12Q14669 1992 aaPredicted RBP20.8■□□□□ 0.92
SYNE2-211ENST00000553801 TLL1O43897 1013 aa20.8■□□□□ 0.92
SYNE2-211ENST00000553801 PLA2G5P39877 138 aa20.8■□□□□ 0.92
SYNE2-211ENST00000553801 CHMP4BP1P59074 171 aa20.8■□□□□ 0.92
SYNE2-211ENST00000553801 PTGISQ16647 500 aa20.8■□□□□ 0.92
SYNE2-211ENST00000553801 GPATCH4Q5T3I0 446 aaKnown RBP20.8■□□□□ 0.92
SYNE2-211ENST00000553801 AFAP1L1Q8TED9 768 aa20.8■□□□□ 0.92
SYNE2-211ENST00000553801 TET1Q8NFU7 2136 aa20.8■□□□□ 0.92
SYNE2-211ENST00000553801 ZMYM6O95789 1325 aa20.79■□□□□ 0.92
SYNE2-211ENST00000553801 SALL3Q9BXA9 1300 aa20.79■□□□□ 0.92
SYNE2-211ENST00000553801 EPOPA6NHQ4 379 aa20.79■□□□□ 0.92
SYNE2-211ENST00000553801 PARNO95453 639 aaKnown RBP20.79■□□□□ 0.92
SYNE2-211ENST00000553801 SNHG28P0DPA3 235 aa20.79■□□□□ 0.92
SYNE2-211ENST00000553801 MFSD6Q6ZSS7 791 aa20.79■□□□□ 0.92
SYNE2-211ENST00000553801 PPP1R13LQ8WUF5 828 aa20.79■□□□□ 0.92
SYNE2-211ENST00000553801 HLA-CQ95604 372 aa20.79■□□□□ 0.92
SYNE2-211ENST00000553801 TANC1Q9C0D5 1861 aa20.79■□□□□ 0.92
SYNE2-211ENST00000553801 GH1P01241 217 aa20.78■□□□□ 0.92
SYNE2-211ENST00000553801 HSPD1P10809 573 aaKnown RBP20.78■□□□□ 0.92
SYNE2-211ENST00000553801 ANKRD45Q5TZF3 282 aa20.78■□□□□ 0.92
SYNE2-211ENST00000553801 SESTD1Q86VW0 696 aa20.78■□□□□ 0.92
SYNE2-211ENST00000553801 RNF41Q9H4P4 317 aaPredicted RBP20.78■□□□□ 0.92
SYNE2-211ENST00000553801 ARIH2O95376 493 aa20.77■□□□□ 0.92
SYNE2-211ENST00000553801 CASTP20810 708 aaKnown RBP20.77■□□□□ 0.92
SYNE2-211ENST00000553801 GRB10Q13322 594 aa20.77■□□□□ 0.92
SYNE2-211ENST00000553801 USH1GQ495M9 461 aa20.77■□□□□ 0.92
SYNE2-211ENST00000553801 KRT40Q6A162 431 aa20.77■□□□□ 0.92
SYNE2-211ENST00000553801 CCDC62Q6P9F0 684 aa20.77■□□□□ 0.92
SYNE2-211ENST00000553801 AFG1LQ8WV93 481 aa20.77■□□□□ 0.92
SYNE2-211ENST00000553801 FAM227BQ96M60 508 aa20.77■□□□□ 0.92
SYNE2-211ENST00000553801 ZBED2Q9BTP6 218 aa20.77■□□□□ 0.92
SYNE2-211ENST00000553801 MMP3P08254 477 aa20.76■□□□□ 0.91
SYNE2-211ENST00000553801 SELPP16109 830 aa20.76■□□□□ 0.91
SYNE2-211ENST00000553801 HAND2P61296 217 aa20.76■□□□□ 0.91
SYNE2-211ENST00000553801 SEPT14Q6ZU15 432 aa20.76■□□□□ 0.91
SYNE2-211ENST00000553801 NSUN6Q8TEA1 469 aaKnown RBP20.76■□□□□ 0.91
SYNE2-211ENST00000553801 ESR2Q92731 530 aa20.76■□□□□ 0.91
SYNE2-211ENST00000553801 IWS1Q96ST2 819 aa20.76■□□□□ 0.91
SYNE2-211ENST00000553801 LMCD1Q9NZU5 365 aa20.76■□□□□ 0.91
SYNE2-211ENST00000553801 TRANK1O15050 2925 aa20.76■□□□□ 0.91
SYNE2-211ENST00000553801 A0A0D9SFI3 127 aa20.75■□□□□ 0.91
SYNE2-211ENST00000553801 ARHGEF15O94989 841 aa20.75■□□□□ 0.91
SYNE2-211ENST00000553801 NT5C2P49902 561 aa20.75■□□□□ 0.91
SYNE2-211ENST00000553801 PDE1AP54750 535 aa20.75■□□□□ 0.91
SYNE2-211ENST00000553801 WDR5P61964 334 aaKnown RBP20.75■□□□□ 0.91
SYNE2-211ENST00000553801 STXBP2Q15833 593 aa20.75■□□□□ 0.91
SYNE2-211ENST00000553801 CCDC178Q5BJE1 867 aa20.75■□□□□ 0.91
SYNE2-211ENST00000553801 GDF6Q6KF10 455 aaPredicted RBP20.75■□□□□ 0.91
SYNE2-211ENST00000553801 CNKSR3Q6P9H4 555 aa20.75■□□□□ 0.91
SYNE2-211ENST00000553801 LRRC8DQ7L1W4 858 aa20.75■□□□□ 0.91
SYNE2-211ENST00000553801 DGKHQ86XP1 1220 aa20.75■□□□□ 0.91
SYNE2-211ENST00000553801 MCF2L2Q86YR7 1114 aa20.75■□□□□ 0.91
SYNE2-211ENST00000553801 ABCB11O95342 1321 aa20.75■□□□□ 0.91
SYNE2-211ENST00000553801 EFCAB14O75071 495 aa20.74■□□□□ 0.91
SYNE2-211ENST00000553801 GOLGA8HP0CJ92 632 aa20.74■□□□□ 0.91
SYNE2-211ENST00000553801 MFAP1P55081 439 aaKnown RBP20.74■□□□□ 0.91
SYNE2-211ENST00000553801 ARHGAP1Q07960 439 aa20.74■□□□□ 0.91
SYNE2-211ENST00000553801 RBL2Q08999 1139 aa20.74■□□□□ 0.91
SYNE2-211ENST00000553801 DGKDQ16760 1214 aa20.74■□□□□ 0.91
SYNE2-211ENST00000553801 LY6KQ17RY6 165 aa20.74■□□□□ 0.91
SYNE2-211ENST00000553801 KATNAL1Q9BW62 490 aa20.74■□□□□ 0.91
SYNE2-211ENST00000553801 UBA5Q9GZZ9 404 aa20.74■□□□□ 0.91
SYNE2-211ENST00000553801 CCDC171Q6TFL3 1326 aa20.74■□□□□ 0.91
SYNE2-211ENST00000553801 ABHD14A-ACY1A0A1B0GW23 586 aa20.73■□□□□ 0.91
SYNE2-211ENST00000553801 LPXNO60711 386 aa20.73■□□□□ 0.91
SYNE2-211ENST00000553801 NMIQ13287 307 aaPredicted RBP20.73■□□□□ 0.91
SYNE2-211ENST00000553801 CDC37Q16543 378 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms