RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 CAP1Q01518 475 aa6.5□□□□□ -1.37
SCFD1-210ENST00000553693 SV2CQ496J9 727 aa6.5□□□□□ -1.37
SCFD1-210ENST00000553693 MARCH10Q8NA82 808 aaPredicted RBP6.5□□□□□ -1.37
SCFD1-210ENST00000553693 KCNC2Q96PR1 638 aa6.5□□□□□ -1.37
SCFD1-210ENST00000553693 TMPRSS5Q9H3S3 457 aa6.5□□□□□ -1.37
SCFD1-210ENST00000553693 LRP2BPQ9P2M1 347 aa6.5□□□□□ -1.37
SCFD1-210ENST00000553693 HCFC2Q9Y5Z7 792 aa6.5□□□□□ -1.37
SCFD1-210ENST00000553693 B2RBV5 119 aa6.49□□□□□ -1.37
SCFD1-210ENST00000553693 ZBTB7AO95365 584 aa6.49□□□□□ -1.37
SCFD1-210ENST00000553693 THBDP07204 575 aa6.49□□□□□ -1.37
SCFD1-210ENST00000553693 LIMS1P48059 325 aa6.49□□□□□ -1.37
SCFD1-210ENST00000553693 E4F1Q66K89 784 aaPredicted RBP6.49□□□□□ -1.37
SCFD1-210ENST00000553693 IQCEQ6IPM2 695 aa6.49□□□□□ -1.37
SCFD1-210ENST00000553693 ZNF227Q86WZ6 799 aa6.49□□□□□ -1.37
SCFD1-210ENST00000553693 DCP2Q8IU60 420 aaKnown RBP6.49□□□□□ -1.37
SCFD1-210ENST00000553693 LINC01356Q8N9X3 169 aa6.49□□□□□ -1.37
SCFD1-210ENST00000553693 ZNF408Q9H9D4 720 aa6.49□□□□□ -1.37
SCFD1-210ENST00000553693 GPRC5CQ9NQ84 441 aa6.49□□□□□ -1.37
SCFD1-210ENST00000553693 R3HCC1Q9Y3T6 440 aaKnown RBP6.49□□□□□ -1.37
SCFD1-210ENST00000553693 ASGR2P07307 311 aa6.48□□□□□ -1.37
SCFD1-210ENST00000553693 SYN1P17600 705 aa6.48□□□□□ -1.37
SCFD1-210ENST00000553693 HOXC12P31275 282 aa6.48□□□□□ -1.37
SCFD1-210ENST00000553693 ETFBP38117 255 aa6.48□□□□□ -1.37
SCFD1-210ENST00000553693 RBM25P49756 843 aaKnown RBP6.48□□□□□ -1.37
SCFD1-210ENST00000553693 KCNAB2Q13303 367 aa6.48□□□□□ -1.37
SCFD1-210ENST00000553693 EEPD1Q7L9B9 569 aa6.48□□□□□ -1.37
SCFD1-210ENST00000553693 NPLOC4Q8TAT6 608 aa6.48□□□□□ -1.37
SCFD1-210ENST00000553693 BTN2A2Q8WVV5 523 aa6.48□□□□□ -1.37
SCFD1-210ENST00000553693 ZNF428Q96B54 188 aa6.48□□□□□ -1.37
SCFD1-210ENST00000553693 CCDC140Q96MF4 163 aa6.48□□□□□ -1.37
SCFD1-210ENST00000553693 EPN3Q9H201 632 aa6.48□□□□□ -1.37
SCFD1-210ENST00000553693 FBLN5Q9UBX5 448 aa6.48□□□□□ -1.37
SCFD1-210ENST00000553693 AGRPO00253 132 aa6.47□□□□□ -1.37
SCFD1-210ENST00000553693 FUCA1P04066 466 aa6.47□□□□□ -1.37
SCFD1-210ENST00000553693 ITGAVP06756 1048 aa6.47□□□□□ -1.37
SCFD1-210ENST00000553693 SNRPB2P08579 225 aaKnown RBP6.47□□□□□ -1.37
SCFD1-210ENST00000553693 DNAJA1P31689 397 aaKnown RBP6.47□□□□□ -1.37
SCFD1-210ENST00000553693 MBLAC2Q68D91 279 aa6.47□□□□□ -1.37
SCFD1-210ENST00000553693 B3GNT8Q7Z7M8 397 aa6.47□□□□□ -1.37
SCFD1-210ENST00000553693 MCF2L2Q86YR7 1114 aa6.47□□□□□ -1.37
SCFD1-210ENST00000553693 SLC43A3Q8NBI5 491 aa6.47□□□□□ -1.37
SCFD1-210ENST00000553693 FRS2Q8WU20 508 aa6.47□□□□□ -1.37
SCFD1-210ENST00000553693 CPA5Q8WXQ8 436 aa6.47□□□□□ -1.37
SCFD1-210ENST00000553693 AP5M1Q9H0R1 490 aa6.47□□□□□ -1.37
SCFD1-210ENST00000553693 RXFP1Q9HBX9 757 aa6.47□□□□□ -1.37
SCFD1-210ENST00000553693 LUC7LQ9NQ29 371 aaKnown RBP6.47□□□□□ -1.37
SCFD1-210ENST00000553693 MARCH2Q9P0N8 246 aa6.47□□□□□ -1.37
SCFD1-210ENST00000553693 MEFVO15553 781 aaPredicted RBP6.46□□□□□ -1.38
SCFD1-210ENST00000553693 MYO1BO43795 1136 aa6.46□□□□□ -1.38
SCFD1-210ENST00000553693 PPP1R11O60927 126 aaPredicted RBP6.46□□□□□ -1.38
SCFD1-210ENST00000553693 CPP00450 1065 aa6.46□□□□□ -1.38
SCFD1-210ENST00000553693 NTRK1P04629 796 aa6.46□□□□□ -1.38
SCFD1-210ENST00000553693 SCG5P05408 212 aa6.46□□□□□ -1.38
SCFD1-210ENST00000553693 PMLP29590 882 aa6.46□□□□□ -1.38
SCFD1-210ENST00000553693 GTF2A2P52657 109 aa6.46□□□□□ -1.38
SCFD1-210ENST00000553693 RPL11P62913 178 aaKnown RBP6.46□□□□□ -1.38
SCFD1-210ENST00000553693 FOXO4P98177 505 aa6.46□□□□□ -1.38
SCFD1-210ENST00000553693 SKOR2Q2VWA4 1001 aaPredicted RBP6.46□□□□□ -1.38
SCFD1-210ENST00000553693 DIO2Q92813 273 aa6.46□□□□□ -1.38
SCFD1-210ENST00000553693 LGR4Q9BXB1 951 aa6.46□□□□□ -1.38
SCFD1-210ENST00000553693 PMF1-BGLAPU3KQ54 211 aa6.46□□□□□ -1.38
SCFD1-210ENST00000553693 GJB6O95452 261 aa6.45□□□□□ -1.38
SCFD1-210ENST00000553693 ATF2P15336 505 aa6.45□□□□□ -1.38
SCFD1-210ENST00000553693 KCNJ6P48051 423 aa6.45□□□□□ -1.38
SCFD1-210ENST00000553693 ACBD5Q5T8D3 534 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-210ENST00000553693 MROH9Q5TGP6 573 aa6.45□□□□□ -1.38
SCFD1-210ENST00000553693 MRM1Q6IN84 353 aaKnown RBP6.45□□□□□ -1.38
SCFD1-210ENST00000553693 PLEKHO2Q8TD55 490 aa6.45□□□□□ -1.38
SCFD1-210ENST00000553693 BTG4Q9NY30 223 aa6.45□□□□□ -1.38
SCFD1-210ENST00000553693 PLA2G2DQ9UNK4 145 aa6.45□□□□□ -1.38
SCFD1-210ENST00000553693 TIMM13Q9Y5L4 95 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-210ENST00000553693 C22orf46C9J442 243 aa6.44□□□□□ -1.38
SCFD1-210ENST00000553693 TBX1O43435 398 aa6.44□□□□□ -1.38
SCFD1-210ENST00000553693 ECI1P42126 302 aa6.44□□□□□ -1.38
SCFD1-210ENST00000553693 SLC6A11P48066 632 aa6.44□□□□□ -1.38
SCFD1-210ENST00000553693 CACNB2Q08289 660 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-210ENST00000553693 TESK1Q15569 626 aa6.44□□□□□ -1.38
SCFD1-210ENST00000553693 VMACQ2NL98 169 aa6.44□□□□□ -1.38
SCFD1-210ENST00000553693 RIOX2Q8IUF8 465 aa6.44□□□□□ -1.38
SCFD1-210ENST00000553693 TEX2Q8IWB9 1127 aa6.44□□□□□ -1.38
SCFD1-210ENST00000553693 MICAL1Q8TDZ2 1067 aa6.44□□□□□ -1.38
SCFD1-210ENST00000553693 FNIP1Q8TF40 1166 aa6.44□□□□□ -1.38
SCFD1-210ENST00000553693 SEC14L1Q92503 715 aa6.44□□□□□ -1.38
SCFD1-210ENST00000553693 DPF3Q92784 378 aa6.44□□□□□ -1.38
SCFD1-210ENST00000553693 GMLQ99445 158 aa6.44□□□□□ -1.38
SCFD1-210ENST00000553693 PCDH18Q9HCL0 1135 aa6.44□□□□□ -1.38
SCFD1-210ENST00000553693 RTEL1Q9NZ71 1219 aa6.44□□□□□ -1.38
SCFD1-210ENST00000553693 LTBRP36941 435 aa6.43□□□□□ -1.38
SCFD1-210ENST00000553693 MC3RP41968 323 aa6.43□□□□□ -1.38
SCFD1-210ENST00000553693 GFRA1P56159 465 aa6.43□□□□□ -1.38
SCFD1-210ENST00000553693 HTRA3P83110 453 aa6.43□□□□□ -1.38
SCFD1-210ENST00000553693 CYP4F3Q08477 520 aa6.43□□□□□ -1.38
SCFD1-210ENST00000553693 NFIXQ14938 502 aa6.43□□□□□ -1.38
SCFD1-210ENST00000553693 INF2Q27J81 1249 aa6.43□□□□□ -1.38
SCFD1-210ENST00000553693 SLC10A6Q3KNW5 377 aa6.43□□□□□ -1.38
SCFD1-210ENST00000553693 ERICH6BQ5W0A0 696 aa6.43□□□□□ -1.38
SCFD1-210ENST00000553693 PRRT2Q7Z6L0 340 aaPredicted RBP6.43□□□□□ -1.38
SCFD1-210ENST00000553693 PPIL6Q8IXY8 311 aa6.43□□□□□ -1.38
SCFD1-210ENST00000553693 Q8N1Y9 231 aa6.43□□□□□ -1.38
SCFD1-210ENST00000553693 HNRNPLLQ8WVV9 542 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms