RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 CFAP45Q9UL16 551 aa11.13□□□□□ -0.63
CHD8-204ENST00000553622 POTEB2H3BUK9 544 aa11.12□□□□□ -0.63
CHD8-204ENST00000553622 CCNT1O60563 726 aaKnown RBP11.12□□□□□ -0.63
CHD8-204ENST00000553622 PGK2P07205 417 aa11.12□□□□□ -0.63
CHD8-204ENST00000553622 BCRP11274 1271 aa11.12□□□□□ -0.63
CHD8-204ENST00000553622 MYCLP12524 364 aaPredicted RBP11.12□□□□□ -0.63
CHD8-204ENST00000553622 MAPK4P31152 587 aa11.12□□□□□ -0.63
CHD8-204ENST00000553622 TOB1P50616 345 aaPredicted RBP11.12□□□□□ -0.63
CHD8-204ENST00000553622 ARHGAP4P98171 946 aa11.12□□□□□ -0.63
CHD8-204ENST00000553622 CNTN2Q02246 1040 aa11.12□□□□□ -0.63
CHD8-204ENST00000553622 SF3A1Q15459 793 aaKnown RBP11.12□□□□□ -0.63
CHD8-204ENST00000553622 ANO1Q5XXA6 986 aa11.12□□□□□ -0.63
CHD8-204ENST00000553622 C17orf99Q6UX52 265 aa11.12□□□□□ -0.63
CHD8-204ENST00000553622 PLEKHH3Q7Z736 793 aa11.12□□□□□ -0.63
CHD8-204ENST00000553622 SAMD3Q8N6K7 520 aa11.12□□□□□ -0.63
CHD8-204ENST00000553622 TAAR1Q96RJ0 339 aa11.12□□□□□ -0.63
CHD8-204ENST00000553622 USP28Q96RU2 1077 aa11.12□□□□□ -0.63
CHD8-204ENST00000553622 RMDN3Q96TC7 470 aa11.12□□□□□ -0.63
CHD8-204ENST00000553622 RNF186Q9NXI6 227 aa11.12□□□□□ -0.63
CHD8-204ENST00000553622 MAP3K20Q9NYL2 800 aaKnown RBP11.12□□□□□ -0.63
CHD8-204ENST00000553622 PCDHB6Q9Y5E3 794 aa11.12□□□□□ -0.63
CHD8-204ENST00000553622 CLIC4Q9Y696 253 aa11.12□□□□□ -0.63
CHD8-204ENST00000553622 LRRC37A2A6NM11 1700 aa11.12□□□□□ -0.63
CHD8-204ENST00000553622 WDR81Q562E7 1941 aa11.11□□□□□ -0.63
CHD8-204ENST00000553622 WNT7AO00755 349 aa11.11□□□□□ -0.63
CHD8-204ENST00000553622 TRAPPC10P48553 1259 aa11.11□□□□□ -0.63
CHD8-204ENST00000553622 GPR142Q7Z601 462 aa11.11□□□□□ -0.63
CHD8-204ENST00000553622 TEX2Q8IWB9 1127 aa11.11□□□□□ -0.63
CHD8-204ENST00000553622 ZFP91Q96JP5 570 aaPredicted RBP11.11□□□□□ -0.63
CHD8-204ENST00000553622 SPATA32Q96LK8 384 aa11.11□□□□□ -0.63
CHD8-204ENST00000553622 BEGAINQ9BUH8 593 aa11.11□□□□□ -0.63
CHD8-204ENST00000553622 PXMP2Q9NR77 195 aa11.11□□□□□ -0.63
CHD8-204ENST00000553622 CEP131Q9UPN4 1083 aa11.11□□□□□ -0.63
CHD8-204ENST00000553622 ZNF236Q9UL36 1845 aa11.11□□□□□ -0.63
CHD8-204ENST00000553622 GOLGA6L22H0YM25 854 aa11.1□□□□□ -0.63
CHD8-204ENST00000553622 TNPO2O14787 897 aaKnown RBP11.1□□□□□ -0.63
CHD8-204ENST00000553622 MARCH6O60337 910 aa11.1□□□□□ -0.63
CHD8-204ENST00000553622 TDP2O95551 362 aa11.1□□□□□ -0.63
CHD8-204ENST00000553622 ADORA2AP29274 412 aa11.1□□□□□ -0.63
CHD8-204ENST00000553622 SREBF1P36956 1147 aa11.1□□□□□ -0.63
CHD8-204ENST00000553622 GHRHRQ02643 423 aa11.1□□□□□ -0.63
CHD8-204ENST00000553622 KIF22Q14807 665 aa11.1□□□□□ -0.63
CHD8-204ENST00000553622 CSPP1Q1MSJ5 1256 aa11.1□□□□□ -0.63
CHD8-204ENST00000553622 ATL3Q6DD88 541 aa11.1□□□□□ -0.63
CHD8-204ENST00000553622 DPP9Q86TI2 863 aa11.1□□□□□ -0.63
CHD8-204ENST00000553622 IL31RAQ8NI17 732 aa11.1□□□□□ -0.63
CHD8-204ENST00000553622 NSUN6Q8TEA1 469 aaKnown RBP11.1□□□□□ -0.63
CHD8-204ENST00000553622 UIMC1Q96RL1 719 aa11.1□□□□□ -0.63
CHD8-204ENST00000553622 RTEL1Q9NZ71 1219 aa11.1□□□□□ -0.63
CHD8-204ENST00000553622 ADD3Q9UEY8 706 aaKnown RBP11.1□□□□□ -0.63
CHD8-204ENST00000553622 CASP8AP2Q9UKL3 1982 aa11.1□□□□□ -0.63
CHD8-204ENST00000553622 MYH9P35579 1960 aaKnown RBP11.09□□□□□ -0.63
CHD8-204ENST00000553622 B4DLN1 442 aa11.09□□□□□ -0.63
CHD8-204ENST00000553622 STRNO43815 780 aa11.09□□□□□ -0.63
CHD8-204ENST00000553622 NEMFO60524 1076 aa11.09□□□□□ -0.63
CHD8-204ENST00000553622 PTPREP23469 700 aa11.09□□□□□ -0.63
CHD8-204ENST00000553622 MARCKSP29966 332 aaPredicted RBP11.09□□□□□ -0.63
CHD8-204ENST00000553622 CCND2P30279 289 aa11.09□□□□□ -0.63
CHD8-204ENST00000553622 ME1P48163 572 aa11.09□□□□□ -0.63
CHD8-204ENST00000553622 USP11P51784 963 aa11.09□□□□□ -0.63
CHD8-204ENST00000553622 FCGRTP55899 365 aa11.09□□□□□ -0.63
CHD8-204ENST00000553622 PDE4DQ08499 809 aa11.09□□□□□ -0.63
CHD8-204ENST00000553622 PGM5Q15124 567 aa11.09□□□□□ -0.63
CHD8-204ENST00000553622 PRR16Q569H4 304 aa11.09□□□□□ -0.63
CHD8-204ENST00000553622 LEO1Q8WVC0 666 aaPredicted RBP11.09□□□□□ -0.63
CHD8-204ENST00000553622 MPHOSPH6Q99547 160 aaKnown RBP11.09□□□□□ -0.63
CHD8-204ENST00000553622 NAP1L4Q99733 375 aaKnown RBP11.09□□□□□ -0.63
CHD8-204ENST00000553622 SCAND2PQ9GZW5 306 aaPredicted RBP11.09□□□□□ -0.63
CHD8-204ENST00000553622 POLR3EQ9NVU0 708 aa11.09□□□□□ -0.63
CHD8-204ENST00000553622 DDX25Q9UHL0 483 aaKnown RBP11.09□□□□□ -0.63
CHD8-204ENST00000553622 TSKSQ9UJT2 592 aa11.09□□□□□ -0.63
CHD8-204ENST00000553622 MRVI1Q9Y6F6 885 aa11.09□□□□□ -0.63
CHD8-204ENST00000553622 DDX49Q9Y6V7 483 aaKnown RBP11.09□□□□□ -0.63
CHD8-204ENST00000553622 RPTORQ8N122 1335 aa11.09□□□□□ -0.63
CHD8-204ENST00000553622 GOLGA6L4A6NEF3 574 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 SOWAHBA6NEL2 793 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 SLC15A5A6NIM6 579 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 SPTLC2O15270 562 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 SLC37A4O43826 429 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 YEATS4O95619 227 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 BMP15O95972 392 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 NR3C2P08235 984 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 GCFC2P16383 781 aaKnown RBP11.08□□□□□ -0.64
CHD8-204ENST00000553622 PSMC4P43686 418 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 NASPP49321 788 aaPredicted RBP11.08□□□□□ -0.64
CHD8-204ENST00000553622 ALDH5A1P51649 535 aaPredicted RBP11.08□□□□□ -0.64
CHD8-204ENST00000553622 LACTBP83111 547 aaPredicted RBP11.08□□□□□ -0.64
CHD8-204ENST00000553622 SP3Q02447 781 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 MAP2K1Q02750 393 aaPredicted RBP11.08□□□□□ -0.64
CHD8-204ENST00000553622 PTGDRQ13258 359 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 GRB14Q14449 540 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 CALCRLQ16602 461 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 PCNX4Q63HM2 1172 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 PLA2G4DQ86XP0 818 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 POTEDQ86YR6 584 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 ABRAQ8N0Z2 381 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 FAM133AQ8N9E0 248 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 PDCD2LQ9BRP1 358 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 ARHGAP39Q9C0H5 1083 aa11.08□□□□□ -0.64
CHD8-204ENST00000553622 MAF1Q9H063 256 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms