RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 MOXD2PA6NHM9 499 aa27.3■■□□□ 1.96
TDP1-205ENST00000553527 HMGB1P09429 215 aaKnown RBP27.3■■□□□ 1.96
TDP1-205ENST00000553527 EDNRBP24530 442 aa27.3■■□□□ 1.96
TDP1-205ENST00000553527 SGMS1Q86VZ5 419 aa27.3■■□□□ 1.96
TDP1-205ENST00000553527 MAF1Q9H063 256 aa27.3■■□□□ 1.96
TDP1-205ENST00000553527 PRDM5Q9NQX1 630 aaPredicted RBP27.3■■□□□ 1.96
TDP1-205ENST00000553527 SEC63Q9UGP8 760 aaKnown RBP27.3■■□□□ 1.96
TDP1-205ENST00000553527 BRPF3Q9ULD4 1205 aa27.3■■□□□ 1.96
TDP1-205ENST00000553527 hCG_1642624A0A1W2PR95 340 aa27.29■■□□□ 1.96
TDP1-205ENST00000553527 CST5P28325 142 aaPredicted RBP27.29■■□□□ 1.96
TDP1-205ENST00000553527 HSD17B4P51659 736 aa27.29■■□□□ 1.96
TDP1-205ENST00000553527 SEPT14Q6ZU15 432 aa27.29■■□□□ 1.96
TDP1-205ENST00000553527 FCHSD1Q86WN1 690 aa27.29■■□□□ 1.96
TDP1-205ENST00000553527 KCNB2Q92953 911 aa27.29■■□□□ 1.96
TDP1-205ENST00000553527 GLT1D1Q96MS3 346 aa27.29■■□□□ 1.96
TDP1-205ENST00000553527 PRKAG2Q9UGJ0 569 aa27.29■■□□□ 1.96
TDP1-205ENST00000553527 KIAA1217Q5T5P2 1943 aa27.28■■□□□ 1.96
TDP1-205ENST00000553527 CTAGE5O15320 804 aa27.28■■□□□ 1.96
TDP1-205ENST00000553527 SMARCA1P28370 1054 aa27.28■■□□□ 1.96
TDP1-205ENST00000553527 FSCN1Q16658 493 aaKnown RBP27.28■■□□□ 1.96
TDP1-205ENST00000553527 DUSP28Q4G0W2 176 aa27.28■■□□□ 1.96
TDP1-205ENST00000553527 APOA5Q6Q788 366 aa27.28■■□□□ 1.96
TDP1-205ENST00000553527 BLOC1S2Q6QNY1 142 aa27.28■■□□□ 1.96
TDP1-205ENST00000553527 USP26Q9BXU7 913 aa27.28■■□□□ 1.96
TDP1-205ENST00000553527 KLF18A0A0U1RQI7 1052 aa27.27■■□□□ 1.96
TDP1-205ENST00000553527 GCOM1H8Y6P7 765 aaPredicted RBP27.27■■□□□ 1.96
TDP1-205ENST00000553527 ZBTB43O43298 467 aa27.27■■□□□ 1.96
TDP1-205ENST00000553527 PQBP1O60828 265 aaKnown RBP27.27■■□□□ 1.96
TDP1-205ENST00000553527 POLR2MP0CAP2 368 aa27.27■■□□□ 1.96
TDP1-205ENST00000553527 MAGEA10P43363 369 aaPredicted RBP27.27■■□□□ 1.96
TDP1-205ENST00000553527 MDM2Q00987 491 aaPredicted RBP27.27■■□□□ 1.96
TDP1-205ENST00000553527 TLE2Q04725 743 aa27.27■■□□□ 1.96
TDP1-205ENST00000553527 SNX17Q15036 470 aa27.27■■□□□ 1.96
TDP1-205ENST00000553527 STXBP2Q15833 593 aa27.27■■□□□ 1.96
TDP1-205ENST00000553527 Q6ZUG5 572 aa27.27■■□□□ 1.96
TDP1-205ENST00000553527 IWS1Q96ST2 819 aa27.27■■□□□ 1.96
TDP1-205ENST00000553527 PXMP2Q9NR77 195 aa27.27■■□□□ 1.96
TDP1-205ENST00000553527 SEC24BO95487 1268 aa27.26■■□□□ 1.95
TDP1-205ENST00000553527 TXNP10599 105 aaKnown RBP27.26■■□□□ 1.95
TDP1-205ENST00000553527 MYCLP12524 364 aaPredicted RBP27.26■■□□□ 1.95
TDP1-205ENST00000553527 PPP2R5BQ15173 497 aa27.26■■□□□ 1.95
TDP1-205ENST00000553527 CXCL17Q6UXB2 119 aa27.26■■□□□ 1.95
TDP1-205ENST00000553527 SCFD2Q8WU76 684 aa27.26■■□□□ 1.95
TDP1-205ENST00000553527 COPS5Q92905 334 aa27.26■■□□□ 1.95
TDP1-205ENST00000553527 MAP3K20Q9NYL2 800 aaKnown RBP27.26■■□□□ 1.95
TDP1-205ENST00000553527 MYH7BA7E2Y1 1941 aa27.26■■□□□ 1.95
TDP1-205ENST00000553527 RBM47A0AV96 593 aaKnown RBP27.25■■□□□ 1.95
TDP1-205ENST00000553527 TMTC3Q6ZXV5 915 aa27.25■■□□□ 1.95
TDP1-205ENST00000553527 OR6J1Q8NGC5 347 aa27.25■■□□□ 1.95
TDP1-205ENST00000553527 Q9Y3F1 56 aa27.25■■□□□ 1.95
TDP1-205ENST00000553527 ZEB2O60315 1214 aa27.24■■□□□ 1.95
TDP1-205ENST00000553527 NR3C2P08235 984 aa27.24■■□□□ 1.95
TDP1-205ENST00000553527 CASTP20810 708 aaKnown RBP27.24■■□□□ 1.95
TDP1-205ENST00000553527 APOBRQ0VD83 1088 aa27.24■■□□□ 1.95
TDP1-205ENST00000553527 RTN1Q16799 776 aa27.24■■□□□ 1.95
TDP1-205ENST00000553527 C1orf53Q5VUE5 145 aa27.24■■□□□ 1.95
TDP1-205ENST00000553527 SH3RF1Q7Z6J0 888 aa27.24■■□□□ 1.95
TDP1-205ENST00000553527 ZFP91Q96JP5 570 aaPredicted RBP27.24■■□□□ 1.95
TDP1-205ENST00000553527 GDF15Q99988 308 aa27.24■■□□□ 1.95
TDP1-205ENST00000553527 LBHD1Q9BQE6 289 aaPredicted RBP27.24■■□□□ 1.95
TDP1-205ENST00000553527 TRIOBPQ9H2D6 2365 aa27.23■■□□□ 1.95
TDP1-205ENST00000553527 GOLGA8AA7E2F4 631 aa27.23■■□□□ 1.95
TDP1-205ENST00000553527 GOLGA8BA8MQT2 603 aa27.23■■□□□ 1.95
TDP1-205ENST00000553527 ARIH2O95376 493 aa27.23■■□□□ 1.95
TDP1-205ENST00000553527 PSMA5P28066 241 aa27.23■■□□□ 1.95
TDP1-205ENST00000553527 NKX3-2P78367 333 aa27.23■■□□□ 1.95
TDP1-205ENST00000553527 GHRHRQ02643 423 aa27.23■■□□□ 1.95
TDP1-205ENST00000553527 TTLL4Q14679 1199 aa27.23■■□□□ 1.95
TDP1-205ENST00000553527 SAMD3Q8N6K7 520 aa27.23■■□□□ 1.95
TDP1-205ENST00000553527 BRF1Q92994 677 aa27.23■■□□□ 1.95
TDP1-205ENST00000553527 RBM28Q9NW13 759 aaKnown RBP27.23■■□□□ 1.95
TDP1-205ENST00000553527 ELP1O95163 1332 aa27.22■■□□□ 1.95
TDP1-205ENST00000553527 RPS6KB1P23443 525 aa27.22■■□□□ 1.95
TDP1-205ENST00000553527 LY6KQ17RY6 165 aa27.22■■□□□ 1.95
TDP1-205ENST00000553527 PDCD2LQ9BRP1 358 aa27.22■■□□□ 1.95
TDP1-205ENST00000553527 PRO3102Q9H379 93 aa27.22■■□□□ 1.95
TDP1-205ENST00000553527 EIF3JO75822 258 aaKnown RBP27.21■■□□□ 1.95
TDP1-205ENST00000553527 MYL3P08590 195 aa27.21■■□□□ 1.95
TDP1-205ENST00000553527 USP17L6PQ6QN14 398 aa27.21■■□□□ 1.95
TDP1-205ENST00000553527 SMARCC2Q8TAQ2 1214 aa27.21■■□□□ 1.95
TDP1-205ENST00000553527 CUL5Q93034 780 aa27.21■■□□□ 1.95
TDP1-205ENST00000553527 UBE2OQ9C0C9 1292 aaKnown RBP27.21■■□□□ 1.95
TDP1-205ENST00000553527 PDLIM7Q9NR12 457 aa27.21■■□□□ 1.95
TDP1-205ENST00000553527 RANBP2P49792 3224 aaKnown RBP27.21■■□□□ 1.95
TDP1-205ENST00000553527 A0A0U1RQG5 324 aaPredicted RBP27.2■■□□□ 1.94
TDP1-205ENST00000553527 TRIM43BA6NCK2 446 aa27.2■■□□□ 1.94
TDP1-205ENST00000553527 DCDC2CA8MYV0 355 aa27.2■■□□□ 1.94
TDP1-205ENST00000553527 NKRFO15226 690 aaKnown RBP eCLIP27.2■■□□□ 1.94
TDP1-205ENST00000553527 CLTBP09497 229 aa27.2■■□□□ 1.94
TDP1-205ENST00000553527 PGM5Q15124 567 aa27.2■■□□□ 1.94
TDP1-205ENST00000553527 HEATR3Q7Z4Q2 680 aa27.2■■□□□ 1.94
TDP1-205ENST00000553527 TRIM43Q96BQ3 446 aaPredicted RBP27.2■■□□□ 1.94
TDP1-205ENST00000553527 TMEM39AQ9NV64 488 aa27.2■■□□□ 1.94
TDP1-205ENST00000553527 ARVCFO00192 962 aa27.19■■□□□ 1.94
TDP1-205ENST00000553527 CDC27P30260 824 aa27.19■■□□□ 1.94
TDP1-205ENST00000553527 CPT1AP50416 773 aa27.19■■□□□ 1.94
TDP1-205ENST00000553527 PSMC6P62333 389 aa27.19■■□□□ 1.94
TDP1-205ENST00000553527 IL31RAQ8NI17 732 aa27.19■■□□□ 1.94
TDP1-205ENST00000553527 GPKOWQ92917 476 aaPredicted RBP eCLIP27.19■■□□□ 1.94
TDP1-205ENST00000553527 MRVI1Q9Y6F6 885 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms