RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 TIMM13Q9Y5L4 95 aaPredicted RBP10.19□□□□□ -0.78
PCNX1-205ENST00000553508 NTRK1P04629 796 aa10.18□□□□□ -0.78
PCNX1-205ENST00000553508 CAPNS1P04632 268 aa10.18□□□□□ -0.78
PCNX1-205ENST00000553508 CFPP27918 469 aa10.18□□□□□ -0.78
PCNX1-205ENST00000553508 BCL6P41182 706 aa10.18□□□□□ -0.78
PCNX1-205ENST00000553508 RPL11P62913 178 aaKnown RBP10.18□□□□□ -0.78
PCNX1-205ENST00000553508 MTERF2Q49AM1 385 aa10.18□□□□□ -0.78
PCNX1-205ENST00000553508 LCE3BQ5TA77 95 aa10.18□□□□□ -0.78
PCNX1-205ENST00000553508 NBPF6Q5VWK0 638 aa10.18□□□□□ -0.78
PCNX1-205ENST00000553508 MZB1Q8WU39 189 aa10.18□□□□□ -0.78
PCNX1-205ENST00000553508 KCTD13Q8WZ19 329 aa10.18□□□□□ -0.78
PCNX1-205ENST00000553508 NBPF4Q96M43 638 aa10.18□□□□□ -0.78
PCNX1-205ENST00000553508 TOX2Q96NM4 488 aa10.18□□□□□ -0.78
PCNX1-205ENST00000553508 ARHGEF4Q9NR80 690 aa10.18□□□□□ -0.78
PCNX1-205ENST00000553508 PLA2G2DQ9UNK4 145 aa10.18□□□□□ -0.78
PCNX1-205ENST00000553508 SIT1Q9Y3P8 196 aa10.18□□□□□ -0.78
PCNX1-205ENST00000553508 C22orf46C9J442 243 aa10.17□□□□□ -0.78
PCNX1-205ENST00000553508 DLX3O60479 287 aa10.17□□□□□ -0.78
PCNX1-205ENST00000553508 FPR2P25090 351 aa10.17□□□□□ -0.78
PCNX1-205ENST00000553508 LINC00310P59036 64 aa10.17□□□□□ -0.78
PCNX1-205ENST00000553508 JAG1P78504 1218 aa10.17□□□□□ -0.78
PCNX1-205ENST00000553508 RBL2Q08999 1139 aa10.17□□□□□ -0.78
PCNX1-205ENST00000553508 KCNAB2Q13303 367 aa10.17□□□□□ -0.78
PCNX1-205ENST00000553508 SLC35F1Q5T1Q4 408 aa10.17□□□□□ -0.78
PCNX1-205ENST00000553508 YOD1Q5VVQ6 348 aaPredicted RBP10.17□□□□□ -0.78
PCNX1-205ENST00000553508 WWC2Q6AWC2 1192 aa10.17□□□□□ -0.78
PCNX1-205ENST00000553508 RCBTB1Q8NDN9 531 aa10.17□□□□□ -0.78
PCNX1-205ENST00000553508 PLEKHO2Q8TD55 490 aa10.17□□□□□ -0.78
PCNX1-205ENST00000553508 ARMC5Q96C12 935 aa10.17□□□□□ -0.78
PCNX1-205ENST00000553508 C1orf159Q96HA4 380 aa10.17□□□□□ -0.78
PCNX1-205ENST00000553508 PCDHA2Q9Y5H9 948 aa10.17□□□□□ -0.78
PCNX1-205ENST00000553508 N4BP3O15049 544 aa10.16□□□□□ -0.78
PCNX1-205ENST00000553508 MYO1BO43795 1136 aa10.16□□□□□ -0.78
PCNX1-205ENST00000553508 LTBRP36941 435 aa10.16□□□□□ -0.78
PCNX1-205ENST00000553508 SSPNQ14714 243 aa10.16□□□□□ -0.78
PCNX1-205ENST00000553508 USP53Q70EK8 1073 aa10.16□□□□□ -0.78
PCNX1-205ENST00000553508 CEP68Q76N32 757 aa10.16□□□□□ -0.78
PCNX1-205ENST00000553508 CILP2Q8IUL8 1156 aa10.16□□□□□ -0.78
PCNX1-205ENST00000553508 LRRC56Q8IYG6 542 aaPredicted RBP10.16□□□□□ -0.78
PCNX1-205ENST00000553508 LRRC47Q8N1G4 583 aaKnown RBP10.16□□□□□ -0.78
PCNX1-205ENST00000553508 DNAJC2Q99543 621 aaKnown RBP10.16□□□□□ -0.78
PCNX1-205ENST00000553508 CCDC113Q9H0I3 377 aa10.16□□□□□ -0.78
PCNX1-205ENST00000553508 IRAK3Q9Y616 596 aa10.16□□□□□ -0.78
PCNX1-205ENST00000553508 TRAV20A0A0B4J274 112 aa10.15□□□□□ -0.78
PCNX1-205ENST00000553508 SSRP1Q08945 709 aaKnown RBP10.15□□□□□ -0.78
PCNX1-205ENST00000553508 RASGRF1Q13972 1273 aa10.15□□□□□ -0.78
PCNX1-205ENST00000553508 ACBD5Q5T8D3 534 aaPredicted RBP10.15□□□□□ -0.78
PCNX1-205ENST00000553508 SREK1Q8WXA9 508 aaKnown RBP10.15□□□□□ -0.78
PCNX1-205ENST00000553508 TRMT2BQ96GJ1 504 aaKnown RBP10.15□□□□□ -0.78
PCNX1-205ENST00000553508 SPATA9Q9BWV2 254 aa10.15□□□□□ -0.78
PCNX1-205ENST00000553508 IRF2BPLQ9H1B7 796 aa10.15□□□□□ -0.78
PCNX1-205ENST00000553508 FBXL7Q9UJT9 491 aa10.15□□□□□ -0.78
PCNX1-205ENST00000553508 KCTD3Q9Y597 815 aa10.15□□□□□ -0.78
PCNX1-205ENST00000553508 NUAK1O60285 661 aa10.14□□□□□ -0.79
PCNX1-205ENST00000553508 PI3P19957 117 aa10.14□□□□□ -0.79
PCNX1-205ENST00000553508 MAP4K2Q12851 820 aa10.14□□□□□ -0.79
PCNX1-205ENST00000553508 CIAPIN1Q6FI81 312 aa10.14□□□□□ -0.79
PCNX1-205ENST00000553508 NSMFQ6X4W1 530 aa10.14□□□□□ -0.79
PCNX1-205ENST00000553508 IGDCC3Q8IVU1 814 aa10.14□□□□□ -0.79
PCNX1-205ENST00000553508 NETO2Q8NC67 525 aa10.14□□□□□ -0.79
PCNX1-205ENST00000553508 PANK1Q8TE04 598 aa10.14□□□□□ -0.79
PCNX1-205ENST00000553508 ALG3Q92685 438 aa10.14□□□□□ -0.79
PCNX1-205ENST00000553508 SIGLEC10Q96LC7 697 aa10.14□□□□□ -0.79
PCNX1-205ENST00000553508 NUDT5Q9UKK9 219 aa10.14□□□□□ -0.79
PCNX1-205ENST00000553508 PCDHA5Q9Y5H7 936 aa10.14□□□□□ -0.79
PCNX1-205ENST00000553508 BLACEA4D250 179 aa10.13□□□□□ -0.79
PCNX1-205ENST00000553508 FAM221BA6H8Z2 402 aa10.13□□□□□ -0.79
PCNX1-205ENST00000553508 BUB1BO60566 1050 aaPredicted RBP10.13□□□□□ -0.79
PCNX1-205ENST00000553508 PABPC1P11940 636 aaKnown RBP10.13□□□□□ -0.79
PCNX1-205ENST00000553508 FZD5Q13467 585 aa10.13□□□□□ -0.79
PCNX1-205ENST00000553508 SERINC3Q13530 473 aa10.13□□□□□ -0.79
PCNX1-205ENST00000553508 KRTAP1-3Q8IUG1 177 aa10.13□□□□□ -0.79
PCNX1-205ENST00000553508 PEX11GQ96HA9 241 aa10.13□□□□□ -0.79
PCNX1-205ENST00000553508 TMEM169Q96HH4 297 aa10.13□□□□□ -0.79
PCNX1-205ENST00000553508 DIAPH1O60610 1272 aaKnown RBP10.12□□□□□ -0.79
PCNX1-205ENST00000553508 IFRD2Q12894 506 aaPredicted RBP10.12□□□□□ -0.79
PCNX1-205ENST00000553508 NLRP10Q86W26 655 aa10.12□□□□□ -0.79
PCNX1-205ENST00000553508 ZSCAN18Q8TBC5 510 aaPredicted RBP10.12□□□□□ -0.79
PCNX1-205ENST00000553508 OSBP2Q969R2 916 aa10.12□□□□□ -0.79
PCNX1-205ENST00000553508 DEPDC7Q96QD5 511 aa10.12□□□□□ -0.79
PCNX1-205ENST00000553508 SRPK1Q96SB4 655 aaKnown RBP10.12□□□□□ -0.79
PCNX1-205ENST00000553508 FGFR1P11362 822 aa10.11□□□□□ -0.79
PCNX1-205ENST00000553508 GTF2A2P52657 109 aa10.11□□□□□ -0.79
PCNX1-205ENST00000553508 LSAMPQ13449 338 aa10.11□□□□□ -0.79
PCNX1-205ENST00000553508 ZNF385BQ569K4 471 aa10.11□□□□□ -0.79
PCNX1-205ENST00000553508 PHF20Q9BVI0 1012 aa10.11□□□□□ -0.79
PCNX1-205ENST00000553508 CLDND1Q9NY35 253 aa10.11□□□□□ -0.79
PCNX1-205ENST00000553508 SNTG2Q9NY99 539 aa10.11□□□□□ -0.79
PCNX1-205ENST00000553508 KDM2BQ8NHM5 1336 aa10.1□□□□□ -0.79
PCNX1-205ENST00000553508 MSCO60682 206 aa10.1□□□□□ -0.79
PCNX1-205ENST00000553508 PFKLP17858 780 aa10.1□□□□□ -0.79
PCNX1-205ENST00000553508 LIMS1P48059 325 aa10.1□□□□□ -0.79
PCNX1-205ENST00000553508 RASA3Q14644 834 aa10.1□□□□□ -0.79
PCNX1-205ENST00000553508 KCNT2Q6UVM3 1135 aa10.1□□□□□ -0.79
PCNX1-205ENST00000553508 C1QL4Q86Z23 238 aa10.1□□□□□ -0.79
PCNX1-205ENST00000553508 TMEFF1Q8IYR6 380 aa10.1□□□□□ -0.79
PCNX1-205ENST00000553508 ZNF669Q96BR6 464 aaPredicted RBP10.1□□□□□ -0.79
PCNX1-205ENST00000553508 CDC6Q99741 560 aa10.1□□□□□ -0.79
PCNX1-205ENST00000553508 RFXAPO00287 272 aa10.09□□□□□ -0.79
PCNX1-205ENST00000553508 MC3RP41968 323 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms