RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 NOD1Q9Y239 953 aa13.84□□□□□ -0.19
HNRNPC-206ENST00000553444 PTPDC1A2A3K4 754 aa13.83□□□□□ -0.2
HNRNPC-206ENST00000553444 TSPY2A6NKD2 308 aa13.83□□□□□ -0.2
HNRNPC-206ENST00000553444 SLC16A2P36021 539 aa13.83□□□□□ -0.2
HNRNPC-206ENST00000553444 DEFB103AP81534 67 aa13.83□□□□□ -0.2
HNRNPC-206ENST00000553444 CCDC96Q2M329 555 aa13.83□□□□□ -0.2
HNRNPC-206ENST00000553444 TTBK2Q6IQ55 1244 aa13.83□□□□□ -0.2
HNRNPC-206ENST00000553444 BTNL9Q6UXG8 535 aa13.83□□□□□ -0.2
HNRNPC-206ENST00000553444 GJD3Q8N144 294 aa13.83□□□□□ -0.2
HNRNPC-206ENST00000553444 CAGE1Q8TC20 777 aa13.83□□□□□ -0.2
HNRNPC-206ENST00000553444 AFAP1L1Q8TED9 768 aa13.83□□□□□ -0.2
HNRNPC-206ENST00000553444 SCFD2Q8WU76 684 aa13.83□□□□□ -0.2
HNRNPC-206ENST00000553444 DCAF4Q8WV16 495 aa13.83□□□□□ -0.2
HNRNPC-206ENST00000553444 CLEC4DQ8WXI8 215 aa13.83□□□□□ -0.2
HNRNPC-206ENST00000553444 GPATCH3Q96I76 525 aa13.83□□□□□ -0.2
HNRNPC-206ENST00000553444 SEC62Q99442 399 aaKnown RBP13.83□□□□□ -0.2
HNRNPC-206ENST00000553444 CHMP4BQ9H444 224 aaKnown RBP13.83□□□□□ -0.2
HNRNPC-206ENST00000553444 SUGCTQ9HAC7 445 aa13.83□□□□□ -0.2
HNRNPC-206ENST00000553444 MTMR7Q9Y216 660 aa13.83□□□□□ -0.2
HNRNPC-206ENST00000553444 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.82□□□□□ -0.2
HNRNPC-206ENST00000553444 PRR33A8MZF0 331 aa13.82□□□□□ -0.2
HNRNPC-206ENST00000553444 CALML3P27482 149 aa13.82□□□□□ -0.2
HNRNPC-206ENST00000553444 ERVK-21P61565 698 aa13.82□□□□□ -0.2
HNRNPC-206ENST00000553444 PDE4DQ08499 809 aa13.82□□□□□ -0.2
HNRNPC-206ENST00000553444 PTGISQ16647 500 aa13.82□□□□□ -0.2
HNRNPC-206ENST00000553444 LEXMQ3ZCV2 418 aa13.82□□□□□ -0.2
HNRNPC-206ENST00000553444 SYDE2Q5VT97 1194 aa13.82□□□□□ -0.2
HNRNPC-206ENST00000553444 ALYREFQ86V81 257 aaKnown RBP13.82□□□□□ -0.2
HNRNPC-206ENST00000553444 SESTD1Q86VW0 696 aa13.82□□□□□ -0.2
HNRNPC-206ENST00000553444 FAM178BQ8IXR5 827 aa13.82□□□□□ -0.2
HNRNPC-206ENST00000553444 CCDC155Q8N6L0 562 aa13.82□□□□□ -0.2
HNRNPC-206ENST00000553444 DHX38Q92620 1227 aaKnown RBP13.82□□□□□ -0.2
HNRNPC-206ENST00000553444 INCENPQ9NQS7 918 aa13.82□□□□□ -0.2
HNRNPC-206ENST00000553444 BRWD1Q9NSI6 2320 aa13.82□□□□□ -0.2
HNRNPC-206ENST00000553444 GBF1Q92538 1859 aa13.81□□□□□ -0.2
HNRNPC-206ENST00000553444 LINC01553A4QN01 128 aa13.81□□□□□ -0.2
HNRNPC-206ENST00000553444 FOXP2O15409 715 aa13.81□□□□□ -0.2
HNRNPC-206ENST00000553444 ARIH2O95376 493 aa13.81□□□□□ -0.2
HNRNPC-206ENST00000553444 GJB5O95377 273 aa13.81□□□□□ -0.2
HNRNPC-206ENST00000553444 CXCL10P02778 98 aa13.81□□□□□ -0.2
HNRNPC-206ENST00000553444 TXNP10599 105 aaKnown RBP13.81□□□□□ -0.2
HNRNPC-206ENST00000553444 SELPP16109 830 aa13.81□□□□□ -0.2
HNRNPC-206ENST00000553444 RBL2Q08999 1139 aa13.81□□□□□ -0.2
HNRNPC-206ENST00000553444 TCTN1Q2MV58 587 aa13.81□□□□□ -0.2
HNRNPC-206ENST00000553444 GDF6Q6KF10 455 aaPredicted RBP13.81□□□□□ -0.2
HNRNPC-206ENST00000553444 CNKSR3Q6P9H4 555 aa13.81□□□□□ -0.2
HNRNPC-206ENST00000553444 RNF207Q6ZRF8 634 aa13.81□□□□□ -0.2
HNRNPC-206ENST00000553444 LRRC8DQ7L1W4 858 aa13.81□□□□□ -0.2
HNRNPC-206ENST00000553444 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.81□□□□□ -0.2
HNRNPC-206ENST00000553444 TGS1Q96RS0 853 aaKnown RBP13.81□□□□□ -0.2
HNRNPC-206ENST00000553444 RAD9AQ99638 391 aa13.81□□□□□ -0.2
HNRNPC-206ENST00000553444 ZBED2Q9BTP6 218 aa13.81□□□□□ -0.2
HNRNPC-206ENST00000553444 MTUS1Q9ULD2 1270 aa13.81□□□□□ -0.2
HNRNPC-206ENST00000553444 NBNO60934 754 aa13.8□□□□□ -0.2
HNRNPC-206ENST00000553444 KCNA5P22460 613 aa13.8□□□□□ -0.2
HNRNPC-206ENST00000553444 RPS6P62753 249 aaKnown RBP13.8□□□□□ -0.2
HNRNPC-206ENST00000553444 CTDSPL2Q05D32 466 aa13.8□□□□□ -0.2
HNRNPC-206ENST00000553444 ZMYM1Q5SVZ6 1142 aa13.8□□□□□ -0.2
HNRNPC-206ENST00000553444 DNERQ8NFT8 737 aa13.8□□□□□ -0.2
HNRNPC-206ENST00000553444 KAT2BQ92831 832 aa13.8□□□□□ -0.2
HNRNPC-206ENST00000553444 MPHOSPH6Q99547 160 aaKnown RBP13.8□□□□□ -0.2
HNRNPC-206ENST00000553444 PNMA2Q9UL42 364 aa13.8□□□□□ -0.2
HNRNPC-206ENST00000553444 FRMPD2Q68DX3 1309 aaPredicted RBP13.8□□□□□ -0.2
HNRNPC-206ENST00000553444 ABHD14A-ACY1A0A1B0GW23 586 aa13.79□□□□□ -0.2
HNRNPC-206ENST00000553444 PARNO95453 639 aaKnown RBP13.79□□□□□ -0.2
HNRNPC-206ENST00000553444 MMP3P08254 477 aa13.79□□□□□ -0.2
HNRNPC-206ENST00000553444 IL9P15248 144 aa13.79□□□□□ -0.2
HNRNPC-206ENST00000553444 CHMP4BP1P59074 171 aa13.79□□□□□ -0.2
HNRNPC-206ENST00000553444 CCDC62Q6P9F0 684 aa13.79□□□□□ -0.2
HNRNPC-206ENST00000553444 AFG1LQ8WV93 481 aa13.79□□□□□ -0.2
HNRNPC-206ENST00000553444 SCN10AQ9Y5Y9 1956 aa13.79□□□□□ -0.2
HNRNPC-206ENST00000553444 ORC4O43929 436 aa13.78□□□□□ -0.2
HNRNPC-206ENST00000553444 RANBP6O60518 1105 aaKnown RBP13.78□□□□□ -0.2
HNRNPC-206ENST00000553444 CKBP12277 381 aa13.78□□□□□ -0.2
HNRNPC-206ENST00000553444 SSTR3P32745 418 aaPredicted RBP13.78□□□□□ -0.2
HNRNPC-206ENST00000553444 TRAF7Q6Q0C0 670 aa13.78□□□□□ -0.2
HNRNPC-206ENST00000553444 TMEM47Q9BQJ4 181 aa13.78□□□□□ -0.2
HNRNPC-206ENST00000553444 DCTPP1Q9H773 170 aa13.78□□□□□ -0.2
HNRNPC-206ENST00000553444 GPCPD1Q9NPB8 672 aa13.78□□□□□ -0.2
HNRNPC-206ENST00000553444 ANAPC4Q9UJX5 808 aa13.78□□□□□ -0.2
HNRNPC-206ENST00000553444 WDR19Q8NEZ3 1342 aa13.78□□□□□ -0.2
HNRNPC-206ENST00000553444 RBAK-RBAKDNI3L0D1 243 aa13.77□□□□□ -0.21
HNRNPC-206ENST00000553444 EFCAB14O75071 495 aa13.77□□□□□ -0.21
HNRNPC-206ENST00000553444 FGRP09769 529 aa13.77□□□□□ -0.21
HNRNPC-206ENST00000553444 PDHBP11177 359 aa13.77□□□□□ -0.21
HNRNPC-206ENST00000553444 TOP1P11387 765 aaKnown RBP13.77□□□□□ -0.21
HNRNPC-206ENST00000553444 ALADP13716 330 aa13.77□□□□□ -0.21
HNRNPC-206ENST00000553444 ARHGAP1Q07960 439 aa13.77□□□□□ -0.21
HNRNPC-206ENST00000553444 TRIM71Q2Q1W2 868 aaKnown RBP13.77□□□□□ -0.21
HNRNPC-206ENST00000553444 PTCRAQ6ISU1 281 aaPredicted RBP13.77□□□□□ -0.21
HNRNPC-206ENST00000553444 PI4K2BQ8TCG2 481 aa13.77□□□□□ -0.21
HNRNPC-206ENST00000553444 FSD1Q9BTV5 496 aa13.77□□□□□ -0.21
HNRNPC-206ENST00000553444 GTF2IRD1Q9UHL9 959 aa13.77□□□□□ -0.21
HNRNPC-206ENST00000553444 TTC41PQ6P2S7 1318 aa13.76□□□□□ -0.21
HNRNPC-206ENST00000553444 GRXCR2A6NFK2 248 aa13.76□□□□□ -0.21
HNRNPC-206ENST00000553444 B4DLN1 442 aa13.76□□□□□ -0.21
HNRNPC-206ENST00000553444 GH1P01241 217 aa13.76□□□□□ -0.21
HNRNPC-206ENST00000553444 MRPL12P52815 198 aaKnown RBP13.76□□□□□ -0.21
HNRNPC-206ENST00000553444 IKBKEQ14164 716 aa13.76□□□□□ -0.21
HNRNPC-206ENST00000553444 MBTPS1Q14703 1052 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms