RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 CATIPQ7Z7H3 387 aa18.47■□□□□ 0.55
CDK4-215ENST00000553237 SLC43A3Q8NBI5 491 aa18.47■□□□□ 0.55
CDK4-215ENST00000553237 PIGSQ96S52 555 aa18.47■□□□□ 0.55
CDK4-215ENST00000553237 PPP1R12CQ9BZL4 782 aa18.47■□□□□ 0.55
CDK4-215ENST00000553237 RIOX1Q9H6W3 641 aa18.47■□□□□ 0.55
CDK4-215ENST00000553237 ANO2Q9NQ90 1003 aa18.47■□□□□ 0.55
CDK4-215ENST00000553237 PCDHA1Q9Y5I3 950 aa18.47■□□□□ 0.55
CDK4-215ENST00000553237 OPLAHO14841 1288 aa18.46■□□□□ 0.55
CDK4-215ENST00000553237 SLC27A2O14975 620 aa18.46■□□□□ 0.55
CDK4-215ENST00000553237 CYTH3O43739 400 aa18.46■□□□□ 0.55
CDK4-215ENST00000553237 ARIH2O95376 493 aa18.46■□□□□ 0.55
CDK4-215ENST00000553237 CD4P01730 458 aa18.46■□□□□ 0.55
CDK4-215ENST00000553237 EIF2AK2P19525 551 aaKnown RBP18.46■□□□□ 0.55
CDK4-215ENST00000553237 COL9A3Q14050 684 aaPredicted RBP18.46■□□□□ 0.55
CDK4-215ENST00000553237 BMP2KLQ5H9B9 411 aa18.46■□□□□ 0.55
CDK4-215ENST00000553237 ARHGEF16Q5VV41 709 aa18.46■□□□□ 0.55
CDK4-215ENST00000553237 CASC1Q6TDU7 716 aa18.46■□□□□ 0.55
CDK4-215ENST00000553237 PIBF1Q8WXW3 757 aa18.46■□□□□ 0.55
CDK4-215ENST00000553237 MYL10Q9BUA6 226 aa18.46■□□□□ 0.55
CDK4-215ENST00000553237 MAF1Q9H063 256 aa18.46■□□□□ 0.55
CDK4-215ENST00000553237 NKRFO15226 690 aaKnown RBP eCLIP18.45■□□□□ 0.54
CDK4-215ENST00000553237 PRC1O43663 620 aa18.45■□□□□ 0.54
CDK4-215ENST00000553237 CPT1AP50416 773 aa18.45■□□□□ 0.54
CDK4-215ENST00000553237 TTLL4Q14679 1199 aa18.45■□□□□ 0.54
CDK4-215ENST00000553237 CREB3L3Q68CJ9 461 aa18.45■□□□□ 0.54
CDK4-215ENST00000553237 MFSD5Q6N075 450 aa18.45■□□□□ 0.54
CDK4-215ENST00000553237 RNPC3Q96LT9 517 aaKnown RBP18.45■□□□□ 0.54
CDK4-215ENST00000553237 TRPV6Q9H1D0 765 aa18.45■□□□□ 0.54
CDK4-215ENST00000553237 LY9Q9HBG7 655 aa18.45■□□□□ 0.54
CDK4-215ENST00000553237 POLR3EQ9NVU0 708 aa18.45■□□□□ 0.54
CDK4-215ENST00000553237 HOXA13P31271 388 aaPredicted RBP18.44■□□□□ 0.54
CDK4-215ENST00000553237 CYP2C18P33260 490 aa18.44■□□□□ 0.54
CDK4-215ENST00000553237 HSD17B4P51659 736 aa18.44■□□□□ 0.54
CDK4-215ENST00000553237 PURAQ00577 322 aaKnown RBP18.44■□□□□ 0.54
CDK4-215ENST00000553237 NECTIN1Q15223 517 aa18.44■□□□□ 0.54
CDK4-215ENST00000553237 STXBP2Q15833 593 aa18.44■□□□□ 0.54
CDK4-215ENST00000553237 LY6KQ17RY6 165 aa18.44■□□□□ 0.54
CDK4-215ENST00000553237 PPP1R13LQ8WUF5 828 aa18.44■□□□□ 0.54
CDK4-215ENST00000553237 FAM161BQ96MY7 647 aa18.44■□□□□ 0.54
CDK4-215ENST00000553237 IWS1Q96ST2 819 aa18.44■□□□□ 0.54
CDK4-215ENST00000553237 PXMP2Q9NR77 195 aa18.44■□□□□ 0.54
CDK4-215ENST00000553237 MTMR10Q9NXD2 777 aa18.44■□□□□ 0.54
CDK4-215ENST00000553237 BAZ2BQ9UIF8 2168 aaKnown RBP18.44■□□□□ 0.54
CDK4-215ENST00000553237 MYH6P13533 1939 aa18.43■□□□□ 0.54
CDK4-215ENST00000553237 B4GALT4O60513 344 aa18.43■□□□□ 0.54
CDK4-215ENST00000553237 NR3C2P08235 984 aa18.43■□□□□ 0.54
CDK4-215ENST00000553237 CSF2RAP15509 400 aa18.43■□□□□ 0.54
CDK4-215ENST00000553237 MCM5P33992 734 aa18.43■□□□□ 0.54
CDK4-215ENST00000553237 BRDTQ58F21 947 aaPredicted RBP18.43■□□□□ 0.54
CDK4-215ENST00000553237 CCDC62Q6P9F0 684 aa18.43■□□□□ 0.54
CDK4-215ENST00000553237 NFXL1Q6ZNB6 911 aa18.43■□□□□ 0.54
CDK4-215ENST00000553237 ZNF654Q8IZM8 581 aa18.43■□□□□ 0.54
CDK4-215ENST00000553237 MTG1Q9BT17 334 aaPredicted RBP18.43■□□□□ 0.54
CDK4-215ENST00000553237 PNMA6FA0A0J9YX94 578 aa18.42■□□□□ 0.54
CDK4-215ENST00000553237 A6NJR5 290 aa18.42■□□□□ 0.54
CDK4-215ENST00000553237 ACRP10323 421 aa18.42■□□□□ 0.54
CDK4-215ENST00000553237 MYCLP12524 364 aaPredicted RBP18.42■□□□□ 0.54
CDK4-215ENST00000553237 CHMP4BP1P59074 171 aa18.42■□□□□ 0.54
CDK4-215ENST00000553237 PPIGQ13427 754 aaKnown RBP eCLIP18.42■□□□□ 0.54
CDK4-215ENST00000553237 C16orf59Q7L2K0 433 aa18.42■□□□□ 0.54
CDK4-215ENST00000553237 TMEM199Q8N511 208 aa18.42■□□□□ 0.54
CDK4-215ENST00000553237 CTCFLQ8NI51 663 aaPredicted RBP18.42■□□□□ 0.54
CDK4-215ENST00000553237 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.42■□□□□ 0.547e-6■■□□□ 11.5
CDK4-215ENST00000553237 LRRC2Q9BYS8 371 aa18.42■□□□□ 0.54
CDK4-215ENST00000553237 ALDH8A1Q9H2A2 487 aaPredicted RBP18.42■□□□□ 0.54
CDK4-215ENST00000553237 HIPK3Q9H422 1215 aa18.42■□□□□ 0.54
CDK4-215ENST00000553237 UMODL1Q5DID0 1318 aa18.42■□□□□ 0.54
CDK4-215ENST00000553237 CCDC69A6NI79 296 aa18.41■□□□□ 0.54
CDK4-215ENST00000553237 SH2B2O14492 632 aaPredicted RBP18.41■□□□□ 0.54
CDK4-215ENST00000553237 EIF3JO75822 258 aaKnown RBP18.41■□□□□ 0.54
CDK4-215ENST00000553237 RXRAP19793 462 aa18.41■□□□□ 0.54
CDK4-215ENST00000553237 GHRHRQ02643 423 aa18.41■□□□□ 0.54
CDK4-215ENST00000553237 NBPF20Q3BBV1 942 aa18.41■□□□□ 0.54
CDK4-215ENST00000553237 FAM47CQ5HY64 1035 aa18.41■□□□□ 0.54
CDK4-215ENST00000553237 FCHSD1Q86WN1 690 aa18.41■□□□□ 0.54
CDK4-215ENST00000553237 RAB11FIP4Q86YS3 637 aa18.41■□□□□ 0.54
CDK4-215ENST00000553237 AFG1LQ8WV93 481 aa18.41■□□□□ 0.54
CDK4-215ENST00000553237 TMEM87BQ96K49 555 aa18.41■□□□□ 0.54
CDK4-215ENST00000553237 SEZ6LQ9BYH1 1024 aa18.41■□□□□ 0.54
CDK4-215ENST00000553237 TRMT13Q9NUP7 481 aaKnown RBP18.41■□□□□ 0.54
CDK4-215ENST00000553237 GCOM1H8Y6P7 765 aaPredicted RBP18.4■□□□□ 0.54
CDK4-215ENST00000553237 KPNA6O60684 536 aa18.4■□□□□ 0.54
CDK4-215ENST00000553237 DDAH1O94760 285 aa18.4■□□□□ 0.54
CDK4-215ENST00000553237 GH1P01241 217 aa18.4■□□□□ 0.54
CDK4-215ENST00000553237 POLR2MP0CAP2 368 aa18.4■□□□□ 0.54
CDK4-215ENST00000553237 KIF5BP33176 963 aa18.4■□□□□ 0.54
CDK4-215ENST00000553237 CCL23P55773 120 aa18.4■□□□□ 0.54
CDK4-215ENST00000553237 ARHGAP1Q07960 439 aa18.4■□□□□ 0.54
CDK4-215ENST00000553237 TRAF1Q13077 416 aa18.4■□□□□ 0.54
CDK4-215ENST00000553237 TMEM240Q5SV17 173 aa18.4■□□□□ 0.54
CDK4-215ENST00000553237 FAM109BQ6ICB4 259 aaPredicted RBP18.4■□□□□ 0.54
CDK4-215ENST00000553237 TMTC2Q8N394 836 aa18.4■□□□□ 0.54
CDK4-215ENST00000553237 ZFP91Q96JP5 570 aaPredicted RBP18.4■□□□□ 0.54
CDK4-215ENST00000553237 MAP3K14Q99558 947 aa18.4■□□□□ 0.54
CDK4-215ENST00000553237 PDCD2LQ9BRP1 358 aa18.4■□□□□ 0.54
CDK4-215ENST00000553237 MTA3Q9BTC8 594 aa18.4■□□□□ 0.54
CDK4-215ENST00000553237 MAP3K20Q9NYL2 800 aaKnown RBP18.4■□□□□ 0.54
CDK4-215ENST00000553237 DDX41Q9UJV9 622 aaKnown RBP18.4■□□□□ 0.54
CDK4-215ENST00000553237 MRVI1Q9Y6F6 885 aa18.4■□□□□ 0.54
CDK4-215ENST00000553237 PLEKHA8P1O95397 391 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms