RNA–Protein interactions for RNA: ENST00000553217.5

TMEM106C-221, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-221ENST00000553217 LINS1Q8NG48 757 aa6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 N4BP2L2Q92802 583 aaPredicted RBP6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 GFM2Q969S9 779 aaKnown RBP6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 FERMT2Q96AC1 680 aa6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 DHX58Q96C10 678 aa6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 XAGE2Q96GT9 111 aa6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 KAZALD1Q96I82 304 aa6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 PRMT6Q96LA8 375 aaPredicted RBP6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 PLA2G12BQ9BX93 195 aa6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 EDEM3Q9BZQ6 932 aa6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 VCXQ9H320 206 aa6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 MAGEF1Q9HAY2 307 aa6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 ABCB6Q9NP58 842 aa6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 CNNM1Q9NRU3 951 aa6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 C9orf78Q9NZ63 289 aaPredicted RBP6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 HDAC9Q9UKV0 1011 aa6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 HPS5Q9UPZ3 1129 aa6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 HPSEQ9Y251 543 aa6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 LEMD3Q9Y2U8 911 aa6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 ZNF609O15014 1411 aa6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 ABCB11O95342 1321 aa6.23□□□□□ -1.41
TMEM106C-221ENST00000553217 ECM29Q5VYK3 1845 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 ERICH2A1L162 156 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 PTPDC1A2A3K4 754 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 TCP10L2B9ZVM9 353 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 GPR25O00155 361 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 IGF2BP3O00425 579 aaKnown RBP eCLIP6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 FOXP2O15409 715 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 SART1O43290 800 aaKnown RBP6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 CA12O43570 354 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 AHCYL1O43865 530 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 HNRNPCL1O60812 293 aaKnown RBP6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 MFAP3LO75121 409 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 TACC1O75410 805 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 DNAJC8O75937 253 aaPredicted RBP6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 MYCP01106 439 aaPredicted RBP6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 LMNAP02545 664 aaKnown RBP6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 GSTA2P09210 222 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 CLCN2P51788 898 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 ZNF131P52739 623 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 MRPS35P82673 323 aaKnown RBP6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 IFIT5Q13325 482 aaKnown RBP6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 XRCC4Q13426 336 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 CUL1Q13616 776 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 TOB2Q14106 344 aaPredicted RBP6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 NAA30Q147X3 362 aaPredicted RBP6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 ARID5BQ14865 1188 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 NR1I3Q14994 352 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 DLGAP5Q15398 846 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 SPA17Q15506 151 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 DPCR1Q3MIW9 517 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 ZNF569Q5MCW4 686 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 CCDC181Q5TID7 509 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 RESP18Q5W5W9 173 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 CCDC129Q6ZRS4 1044 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 Q6ZUG5 572 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 TRAPPC11Q7Z392 1133 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 CTU1Q7Z7A3 348 aaKnown RBP6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 TMEM139Q8IV31 216 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 MFN1Q8IWA4 741 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 PARP9Q8IXQ6 854 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 OGFOD1Q8N543 542 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 PDILTQ8N807 584 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 IGSF22Q8N9C0 903 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 TC2NQ8N9U0 490 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 ZFAND2BQ8WV99 257 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 CENPTQ96BT3 561 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 ZBED3Q96IU2 234 aaPredicted RBP6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 TMEM87BQ96K49 555 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 CCDC114Q96M63 670 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 JPH2Q9BR39 696 aaPredicted RBP6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 ANKRD2Q9GZV1 360 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 DEFB129Q9H1M3 183 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 TDRD3Q9H7E2 651 aaKnown RBP6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 ELP3Q9H9T3 547 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 PLCB1Q9NQ66 1216 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 TOMM22Q9NS69 142 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 SAGE1Q9NXZ1 904 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 ETAA1Q9NY74 926 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 NOP53Q9NZM5 478 aaKnown RBP6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 LARSQ9P2J5 1176 aaKnown RBP6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 CAPN7Q9Y6W3 813 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 MYH7P12883 1935 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 PITPNM2Q9BZ72 1349 aa6.22□□□□□ -1.41
TMEM106C-221ENST00000553217 PNMA6EA0A0J9YXQ4 647 aa6.21□□□□□ -1.42
TMEM106C-221ENST00000553217 H3BQF6 201 aa6.21□□□□□ -1.42
TMEM106C-221ENST00000553217 EVI5O60447 810 aa6.21□□□□□ -1.42
TMEM106C-221ENST00000553217 PPP1R37O75864 691 aa6.21□□□□□ -1.42
TMEM106C-221ENST00000553217 RASSF9O75901 435 aa6.21□□□□□ -1.42
TMEM106C-221ENST00000553217 SEC31AO94979 1220 aaKnown RBP6.21□□□□□ -1.42
TMEM106C-221ENST00000553217 SLURP2P0DP57 97 aa6.21□□□□□ -1.42
TMEM106C-221ENST00000553217 PFKFB1P16118 471 aa6.21□□□□□ -1.42
TMEM106C-221ENST00000553217 PECAM1P16284 738 aaPredicted RBP6.21□□□□□ -1.42
TMEM106C-221ENST00000553217 FERP16591 822 aa6.21□□□□□ -1.42
TMEM106C-221ENST00000553217 CCND1P24385 295 aa6.21□□□□□ -1.42
TMEM106C-221ENST00000553217 ANXA13P27216 316 aa6.21□□□□□ -1.42
TMEM106C-221ENST00000553217 CNGA1P29973 690 aa6.21□□□□□ -1.42
TMEM106C-221ENST00000553217 ATP5DP30049 168 aa6.21□□□□□ -1.42
TMEM106C-221ENST00000553217 ADD1P35611 737 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms