RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 SLC17A8Q8NDX2 589 aa12.34□□□□□ -0.43
DDX23-217ENST00000553065 NOC4LQ9BVI4 516 aaKnown RBP12.34□□□□□ -0.43
DDX23-217ENST00000553065 BCAS3Q9H6U6 928 aa12.34□□□□□ -0.43
DDX23-217ENST00000553065 RIOX1Q9H6W3 641 aa12.34□□□□□ -0.43
DDX23-217ENST00000553065 CXXC1Q9P0U4 656 aaPredicted RBP12.34□□□□□ -0.43
DDX23-217ENST00000553065 BAZ2BQ9UIF8 2168 aaKnown RBP12.33□□□□□ -0.44
DDX23-217ENST00000553065 KLRF2D3W0D1 207 aa12.33□□□□□ -0.44
DDX23-217ENST00000553065 CABYRO75952 493 aa12.33□□□□□ -0.44
DDX23-217ENST00000553065 GPNMBQ14956 572 aa12.33□□□□□ -0.44
DDX23-217ENST00000553065 LY6KQ17RY6 165 aa12.33□□□□□ -0.44
DDX23-217ENST00000553065 IFIT1BQ5T764 474 aaKnown RBP12.33□□□□□ -0.44
DDX23-217ENST00000553065 KAT2BQ92831 832 aa12.33□□□□□ -0.44
DDX23-217ENST00000553065 RNPC3Q96LT9 517 aaKnown RBP12.33□□□□□ -0.44
DDX23-217ENST00000553065 LSG1Q9H089 658 aaKnown RBP12.33□□□□□ -0.44
DDX23-217ENST00000553065 ALDH8A1Q9H2A2 487 aaPredicted RBP12.33□□□□□ -0.44
DDX23-217ENST00000553065 CNNM2Q9H8M5 875 aa12.33□□□□□ -0.44
DDX23-217ENST00000553065 TRMT13Q9NUP7 481 aaKnown RBP12.33□□□□□ -0.44
DDX23-217ENST00000553065 CHD7Q9P2D1 2997 aa12.33□□□□□ -0.44
DDX23-217ENST00000553065 ABCB11O95342 1321 aa12.33□□□□□ -0.44
DDX23-217ENST00000553065 MROH7Q68CQ1 1323 aa12.33□□□□□ -0.44
DDX23-217ENST00000553065 TXNP10599 105 aaKnown RBP12.32□□□□□ -0.44
DDX23-217ENST00000553065 CYP2C9P11712 490 aa12.32□□□□□ -0.44
DDX23-217ENST00000553065 HSD17B4P51659 736 aa12.32□□□□□ -0.44
DDX23-217ENST00000553065 CCL23P55773 120 aa12.32□□□□□ -0.44
DDX23-217ENST00000553065 ARHGAP1Q07960 439 aa12.32□□□□□ -0.44
DDX23-217ENST00000553065 PDE4DQ08499 809 aa12.32□□□□□ -0.44
DDX23-217ENST00000553065 GRM4Q14833 912 aa12.32□□□□□ -0.44
DDX23-217ENST00000553065 GRIN2CQ14957 1233 aa12.32□□□□□ -0.44
DDX23-217ENST00000553065 NBPF20Q3BBV1 942 aa12.32□□□□□ -0.44
DDX23-217ENST00000553065 FBXO11Q86XK2 927 aa12.32□□□□□ -0.44
DDX23-217ENST00000553065 MB21D2Q8IYB1 491 aaPredicted RBP12.32□□□□□ -0.44
DDX23-217ENST00000553065 OR6J1Q8NGC5 347 aa12.32□□□□□ -0.44
DDX23-217ENST00000553065 ZFP91Q96JP5 570 aaPredicted RBP12.32□□□□□ -0.44
DDX23-217ENST00000553065 PIGSQ96S52 555 aa12.32□□□□□ -0.44
DDX23-217ENST00000553065 MAF1Q9H063 256 aa12.32□□□□□ -0.44
DDX23-217ENST00000553065 DDX41Q9UJV9 622 aaKnown RBP12.32□□□□□ -0.44
DDX23-217ENST00000553065 PNMA2Q9UL42 364 aa12.32□□□□□ -0.44
DDX23-217ENST00000553065 RAD50Q92878 1312 aa12.32□□□□□ -0.44
DDX23-217ENST00000553065 SCN10AQ9Y5Y9 1956 aa12.31□□□□□ -0.44
DDX23-217ENST00000553065 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.31□□□□□ -0.44
DDX23-217ENST00000553065 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.31□□□□□ -0.44
DDX23-217ENST00000553065 MYL3P08590 195 aa12.31□□□□□ -0.44
DDX23-217ENST00000553065 SP2Q02086 613 aa12.31□□□□□ -0.44
DDX23-217ENST00000553065 HIC1Q14526 733 aa12.31□□□□□ -0.44
DDX23-217ENST00000553065 SEPT14Q6ZU15 432 aa12.31□□□□□ -0.44
DDX23-217ENST00000553065 IL31RAQ8NI17 732 aa12.31□□□□□ -0.44
DDX23-217ENST00000553065 SCFD2Q8WU76 684 aa12.31□□□□□ -0.44
DDX23-217ENST00000553065 AFG1LQ8WV93 481 aa12.31□□□□□ -0.44
DDX23-217ENST00000553065 MYLIPQ8WY64 445 aa12.31□□□□□ -0.44
DDX23-217ENST00000553065 HERVK_113Q902F9 699 aa12.31□□□□□ -0.44
DDX23-217ENST00000553065 GPKOWQ92917 476 aaPredicted RBP eCLIP12.31□□□□□ -0.44
DDX23-217ENST00000553065 SCLYQ96I15 445 aa12.31□□□□□ -0.44
DDX23-217ENST00000553065 RMDN3Q96TC7 470 aa12.31□□□□□ -0.44
DDX23-217ENST00000553065 UBAC1Q9BSL1 405 aa12.31□□□□□ -0.44
DDX23-217ENST00000553065 IL23AQ9NPF7 189 aa12.31□□□□□ -0.44
DDX23-217ENST00000553065 PXMP2Q9NR77 195 aa12.31□□□□□ -0.44
DDX23-217ENST00000553065 RBM8AQ9Y5S9 174 aaKnown RBP12.31□□□□□ -0.44
DDX23-217ENST00000553065 IFIT3O14879 490 aaKnown RBP12.3□□□□□ -0.44
DDX23-217ENST00000553065 ZBTB5O15062 677 aa12.3□□□□□ -0.44
DDX23-217ENST00000553065 NR3C2P08235 984 aa12.3□□□□□ -0.44
DDX23-217ENST00000553065 HOXA13P31271 388 aaPredicted RBP12.3□□□□□ -0.44
DDX23-217ENST00000553065 PPIGQ13427 754 aaKnown RBP eCLIP12.3□□□□□ -0.441e-6■□□□□ 8.9
DDX23-217ENST00000553065 NECTIN1Q15223 517 aa12.3□□□□□ -0.44
DDX23-217ENST00000553065 ZNF697Q5TEC3 545 aa12.3□□□□□ -0.44
DDX23-217ENST00000553065 VSIG10LQ86VR7 867 aa12.3□□□□□ -0.44
DDX23-217ENST00000553065 TMEM199Q8N511 208 aa12.3□□□□□ -0.44
DDX23-217ENST00000553065 NSUN6Q8TEA1 469 aaKnown RBP12.3□□□□□ -0.44
DDX23-217ENST00000553065 IWS1Q96ST2 819 aa12.3□□□□□ -0.44
DDX23-217ENST00000553065 MTG1Q9BT17 334 aaPredicted RBP12.3□□□□□ -0.44
DDX23-217ENST00000553065 AMNQ9BXJ7 453 aa12.3□□□□□ -0.44
DDX23-217ENST00000553065 PBX4Q9BYU1 374 aa12.3□□□□□ -0.44
DDX23-217ENST00000553065 HIPK3Q9H422 1215 aa12.3□□□□□ -0.44
DDX23-217ENST00000553065 POLR3EQ9NVU0 708 aa12.3□□□□□ -0.44
DDX23-217ENST00000553065 MRPL11Q9Y3B7 192 aaKnown RBP12.3□□□□□ -0.44
DDX23-217ENST00000553065 TELO2Q9Y4R8 837 aa12.3□□□□□ -0.44
DDX23-217ENST00000553065 U3KPZ7 1027 aaPredicted RBP12.3□□□□□ -0.44
DDX23-217ENST00000553065 NKRFO15226 690 aaKnown RBP eCLIP12.29□□□□□ -0.44
DDX23-217ENST00000553065 TLR3O15455 904 aaKnown RBP12.29□□□□□ -0.44
DDX23-217ENST00000553065 ZEB2O60315 1214 aa12.29□□□□□ -0.44
DDX23-217ENST00000553065 CFBP00751 764 aa12.29□□□□□ -0.44
DDX23-217ENST00000553065 EIF2AK2P19525 551 aaKnown RBP12.29□□□□□ -0.44
DDX23-217ENST00000553065 PPP2R5BQ15173 497 aa12.29□□□□□ -0.44
DDX23-217ENST00000553065 MCF2L2Q86YR7 1114 aa12.29□□□□□ -0.44
DDX23-217ENST00000553065 NCOA7Q8NI08 942 aa12.29□□□□□ -0.44
DDX23-217ENST00000553065 RUFY2Q8WXA3 655 aa12.29□□□□□ -0.44
DDX23-217ENST00000553065 PDCD2LQ9BRP1 358 aa12.29□□□□□ -0.44
DDX23-217ENST00000553065 SEZ6LQ9BYH1 1024 aa12.29□□□□□ -0.44
DDX23-217ENST00000553065 LY9Q9HBG7 655 aa12.29□□□□□ -0.44
DDX23-217ENST00000553065 YBX2Q9Y2T7 364 aaKnown RBP12.29□□□□□ -0.44
DDX23-217ENST00000553065 PCDHA1Q9Y5I3 950 aa12.29□□□□□ -0.44
DDX23-217ENST00000553065 REV3LO60673 3130 aa12.29□□□□□ -0.44
DDX23-217ENST00000553065 TET1Q8NFU7 2136 aa12.28□□□□□ -0.44
DDX23-217ENST00000553065 DLL1O00548 723 aa12.28□□□□□ -0.44
DDX23-217ENST00000553065 EIF3JO75822 258 aaKnown RBP12.28□□□□□ -0.44
DDX23-217ENST00000553065 FGBP02675 491 aa12.28□□□□□ -0.44
DDX23-217ENST00000553065 MMP3P08254 477 aa12.28□□□□□ -0.44
DDX23-217ENST00000553065 DNAJB2P25686 324 aa12.28□□□□□ -0.44
DDX23-217ENST00000553065 CPT1AP50416 773 aa12.28□□□□□ -0.44
DDX23-217ENST00000553065 MRPS9P82933 396 aaKnown RBP12.28□□□□□ -0.44
DDX23-217ENST00000553065 TTLL4Q14679 1199 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms