RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 TTC39AQ5SRH9 613 aa10.53□□□□□ -0.72
PRKCH-203ENST00000552875 EEPD1Q7L9B9 569 aa10.53□□□□□ -0.72
PRKCH-203ENST00000552875 GPR161Q8N6U8 529 aaKnown RBP10.53□□□□□ -0.72
PRKCH-203ENST00000552875 FAM133AQ8N9E0 248 aa10.53□□□□□ -0.72
PRKCH-203ENST00000552875 KREMEN2Q8NCW0 462 aa10.53□□□□□ -0.72
PRKCH-203ENST00000552875 CCDC17Q96LX7 622 aa10.53□□□□□ -0.72
PRKCH-203ENST00000552875 ACAD9Q9H845 621 aa10.53□□□□□ -0.72
PRKCH-203ENST00000552875 KANSL2Q9H9L4 492 aa10.53□□□□□ -0.72
PRKCH-203ENST00000552875 RALYQ9UKM9 306 aaKnown RBP10.53□□□□□ -0.72
PRKCH-203ENST00000552875 PA2G4Q9UQ80 394 aaKnown RBP10.53□□□□□ -0.72
PRKCH-203ENST00000552875 SCN5AQ14524 2016 aa10.53□□□□□ -0.72
PRKCH-203ENST00000552875 PTPRCP08575 1304 aa10.53□□□□□ -0.72
PRKCH-203ENST00000552875 CCER2I3L3R5 266 aa10.52□□□□□ -0.73
PRKCH-203ENST00000552875 LGR5O75473 907 aa10.52□□□□□ -0.73
PRKCH-203ENST00000552875 ADRB1P08588 477 aa10.52□□□□□ -0.73
PRKCH-203ENST00000552875 CKBP12277 381 aa10.52□□□□□ -0.73
PRKCH-203ENST00000552875 CHMP4BP1P59074 171 aa10.52□□□□□ -0.73
PRKCH-203ENST00000552875 CNTN2Q02246 1040 aa10.52□□□□□ -0.73
PRKCH-203ENST00000552875 GPNMBQ14956 572 aa10.52□□□□□ -0.73
PRKCH-203ENST00000552875 TAPT1Q6NXT6 567 aa10.52□□□□□ -0.73
PRKCH-203ENST00000552875 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.52□□□□□ -0.73
PRKCH-203ENST00000552875 FBXO16Q8IX29 292 aaPredicted RBP10.52□□□□□ -0.73
PRKCH-203ENST00000552875 FIBCD1Q8N539 461 aa10.52□□□□□ -0.73
PRKCH-203ENST00000552875 EFHBQ8N7U6 833 aa10.52□□□□□ -0.73
PRKCH-203ENST00000552875 OR6J1Q8NGC5 347 aa10.52□□□□□ -0.73
PRKCH-203ENST00000552875 PDGFCQ9NRA1 345 aa10.52□□□□□ -0.73
PRKCH-203ENST00000552875 MCM9Q9NXL9 1143 aa10.52□□□□□ -0.73
PRKCH-203ENST00000552875 CDV3Q9UKY7 258 aaKnown RBP10.52□□□□□ -0.73
PRKCH-203ENST00000552875 NR2E1Q9Y466 385 aa10.52□□□□□ -0.73
PRKCH-203ENST00000552875 TANC1Q9C0D5 1861 aa10.52□□□□□ -0.73
PRKCH-203ENST00000552875 NKRFO15226 690 aaKnown RBP eCLIP10.51□□□□□ -0.73
PRKCH-203ENST00000552875 MMP1P03956 469 aa10.51□□□□□ -0.73
PRKCH-203ENST00000552875 SRGAP2BP0DMP2 458 aa10.51□□□□□ -0.73
PRKCH-203ENST00000552875 EEF2P13639 858 aaKnown RBP10.51□□□□□ -0.73
PRKCH-203ENST00000552875 GTF2F1P35269 517 aaKnown RBP eCLIP10.51□□□□□ -0.73
PRKCH-203ENST00000552875 BMPR1AP36894 532 aa10.51□□□□□ -0.73
PRKCH-203ENST00000552875 SIAH1Q8IUQ4 282 aa10.51□□□□□ -0.73
PRKCH-203ENST00000552875 CCDC105Q8IYK2 499 aa10.51□□□□□ -0.73
PRKCH-203ENST00000552875 TOP1MTQ969P6 601 aa10.51□□□□□ -0.73
PRKCH-203ENST00000552875 WDR11Q9BZH6 1224 aa10.51□□□□□ -0.73
PRKCH-203ENST00000552875 RAVER2Q9HCJ3 691 aaKnown RBP10.51□□□□□ -0.73
PRKCH-203ENST00000552875 SNRKQ9NRH2 765 aa10.51□□□□□ -0.73
PRKCH-203ENST00000552875 HOMER2Q9NSB8 354 aa10.51□□□□□ -0.73
PRKCH-203ENST00000552875 CLEC1BQ9P126 229 aa10.51□□□□□ -0.73
PRKCH-203ENST00000552875 FOCADQ5VW36 1801 aa10.5□□□□□ -0.73
PRKCH-203ENST00000552875 PRR5-ARHGAP8B1AHC4 643 aa10.5□□□□□ -0.73
PRKCH-203ENST00000552875 GRM6O15303 877 aa10.5□□□□□ -0.73
PRKCH-203ENST00000552875 IDH1O75874 414 aaKnown RBP10.5□□□□□ -0.73
PRKCH-203ENST00000552875 UPP2O95045 317 aa10.5□□□□□ -0.73
PRKCH-203ENST00000552875 CYP2E1P05181 493 aaPredicted RBP10.5□□□□□ -0.73
PRKCH-203ENST00000552875 PTGS1P23219 599 aa10.5□□□□□ -0.73
PRKCH-203ENST00000552875 ARHGAP8P85298 464 aa10.5□□□□□ -0.73
PRKCH-203ENST00000552875 SESTD1Q86VW0 696 aa10.5□□□□□ -0.73
PRKCH-203ENST00000552875 CLEC10AQ8IUN9 316 aa10.5□□□□□ -0.73
PRKCH-203ENST00000552875 AMOTL1Q8IY63 956 aa10.5□□□□□ -0.73
PRKCH-203ENST00000552875 MIER1Q8N108 512 aa10.5□□□□□ -0.73
PRKCH-203ENST00000552875 FLCNQ8NFG4 579 aa10.5□□□□□ -0.73
PRKCH-203ENST00000552875 IL17RAQ96F46 866 aa10.5□□□□□ -0.73
PRKCH-203ENST00000552875 RTP3Q9BQQ7 232 aa10.5□□□□□ -0.73
PRKCH-203ENST00000552875 RTKNQ9BST9 563 aa10.5□□□□□ -0.73
PRKCH-203ENST00000552875 PLVAPQ9BX97 442 aa10.5□□□□□ -0.73
PRKCH-203ENST00000552875 IFIH1Q9BYX4 1025 aaKnown RBP10.5□□□□□ -0.73
PRKCH-203ENST00000552875 SLC38A10Q9HBR0 1119 aa10.5□□□□□ -0.73
PRKCH-203ENST00000552875 ZNF292O60281 2723 aa10.5□□□□□ -0.73
PRKCH-203ENST00000552875 EP300Q09472 2414 aaPredicted RBP10.49□□□□□ -0.73
PRKCH-203ENST00000552875 SOBPA7XYQ1 873 aa10.49□□□□□ -0.73
PRKCH-203ENST00000552875 E9PSI1 815 aa10.49□□□□□ -0.73
PRKCH-203ENST00000552875 FDX1P10109 184 aa10.49□□□□□ -0.73
PRKCH-203ENST00000552875 AKR1B1P15121 316 aa10.49□□□□□ -0.73
PRKCH-203ENST00000552875 ATXN1P54253 815 aaKnown RBP10.49□□□□□ -0.73
PRKCH-203ENST00000552875 WDR63Q8IWG1 891 aa10.49□□□□□ -0.73
PRKCH-203ENST00000552875 SECISBP2LQ93073 1101 aaKnown RBP10.49□□□□□ -0.73
PRKCH-203ENST00000552875 KIFC2Q96AC6 838 aa10.49□□□□□ -0.73
PRKCH-203ENST00000552875 MPHOSPH6Q99547 160 aaKnown RBP10.49□□□□□ -0.73
PRKCH-203ENST00000552875 CRNKL1Q9BZJ0 848 aaKnown RBP10.49□□□□□ -0.73
PRKCH-203ENST00000552875 A6NJR5 290 aa10.48□□□□□ -0.73
PRKCH-203ENST00000552875 CSPG5O95196 566 aa10.48□□□□□ -0.73
PRKCH-203ENST00000552875 AOC1P19801 751 aa10.48□□□□□ -0.73
PRKCH-203ENST00000552875 LMNB2Q03252 620 aa10.48□□□□□ -0.73
PRKCH-203ENST00000552875 PTK7Q13308 1070 aa10.48□□□□□ -0.73
PRKCH-203ENST00000552875 PPP2R5BQ15173 497 aa10.48□□□□□ -0.73
PRKCH-203ENST00000552875 TCTN1Q2MV58 587 aa10.48□□□□□ -0.73
PRKCH-203ENST00000552875 TKFCQ3LXA3 575 aa10.48□□□□□ -0.73
PRKCH-203ENST00000552875 C7orf31Q8N865 590 aa10.48□□□□□ -0.73
PRKCH-203ENST00000552875 DTWD2Q8NBA8 298 aa10.48□□□□□ -0.73
PRKCH-203ENST00000552875 DBF4BQ8NFT6 615 aa10.48□□□□□ -0.73
PRKCH-203ENST00000552875 SUSD6Q92537 303 aa10.48□□□□□ -0.73
PRKCH-203ENST00000552875 SEPT8Q92599 483 aa10.48□□□□□ -0.73
PRKCH-203ENST00000552875 NEK1Q96PY6 1258 aa10.48□□□□□ -0.73
PRKCH-203ENST00000552875 A1CFQ9NQ94 594 aaKnown RBP10.48□□□□□ -0.73
PRKCH-203ENST00000552875 ADD3Q9UEY8 706 aaKnown RBP10.48□□□□□ -0.73
PRKCH-203ENST00000552875 BARX2Q9UMQ3 279 aaPredicted RBP10.48□□□□□ -0.73
PRKCH-203ENST00000552875 FAM208BQ5VWN6 2430 aa10.48□□□□□ -0.73
PRKCH-203ENST00000552875 ANKRD11Q6UB99 2663 aaPredicted RBP10.47□□□□□ -0.73
PRKCH-203ENST00000552875 PTPRSQ13332 1948 aa10.47□□□□□ -0.73
PRKCH-203ENST00000552875 LOC102724159A0A0B4J2E5 919 aa10.47□□□□□ -0.73
PRKCH-203ENST00000552875 BRD1O95696 1058 aa10.47□□□□□ -0.73
PRKCH-203ENST00000552875 NRIP1P48552 1158 aa10.47□□□□□ -0.73
PRKCH-203ENST00000552875 PWP2Q15269 919 aaKnown RBP10.47□□□□□ -0.73
PRKCH-203ENST00000552875 NAALADL2Q58DX5 795 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms