RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 DDX11Q96FC9 970 aa10.53□□□□□ -0.72
CCDC59-207ENST00000552606 SLC26A6Q9BXS9 759 aa10.53□□□□□ -0.72
CCDC59-207ENST00000552606 KATNBL1Q9H079 304 aa10.53□□□□□ -0.72
CCDC59-207ENST00000552606 SH2B1Q9NRF2 756 aaPredicted RBP10.53□□□□□ -0.72
CCDC59-207ENST00000552606 BARHL2Q9NY43 387 aa10.53□□□□□ -0.72
CCDC59-207ENST00000552606 V9GY48 417 aaPredicted RBP10.53□□□□□ -0.72
CCDC59-207ENST00000552606 SYNGAP1Q96PV0 1343 aa10.53□□□□□ -0.72
CCDC59-207ENST00000552606 LOC102724159A0A0B4J2E5 919 aa10.52□□□□□ -0.73
CCDC59-207ENST00000552606 PIK3CDO00329 1044 aa10.52□□□□□ -0.73
CCDC59-207ENST00000552606 MEIS2O14770 477 aa10.52□□□□□ -0.73
CCDC59-207ENST00000552606 CPLX1O14810 134 aa10.52□□□□□ -0.73
CCDC59-207ENST00000552606 DTNBO60941 627 aa10.52□□□□□ -0.73
CCDC59-207ENST00000552606 FDPSP14324 419 aaKnown RBP10.52□□□□□ -0.73
CCDC59-207ENST00000552606 EDNRBP24530 442 aa10.52□□□□□ -0.73
CCDC59-207ENST00000552606 ALDH5A1P51649 535 aaPredicted RBP10.52□□□□□ -0.73
CCDC59-207ENST00000552606 PWP2Q15269 919 aaKnown RBP10.52□□□□□ -0.73
CCDC59-207ENST00000552606 MCF2L2Q86YR7 1114 aa10.52□□□□□ -0.73
CCDC59-207ENST00000552606 TRPV1Q8NER1 839 aa10.52□□□□□ -0.73
CCDC59-207ENST00000552606 SYTL5Q8TDW5 730 aaPredicted RBP10.52□□□□□ -0.73
CCDC59-207ENST00000552606 ABHD8Q96I13 439 aa10.52□□□□□ -0.73
CCDC59-207ENST00000552606 ZSCAN31Q96LW9 406 aaPredicted RBP10.52□□□□□ -0.73
CCDC59-207ENST00000552606 SLC5A4Q9NY91 659 aa10.52□□□□□ -0.73
CCDC59-207ENST00000552606 MAP3K20Q9NYL2 800 aaKnown RBP10.52□□□□□ -0.73
CCDC59-207ENST00000552606 DDX49Q9Y6V7 483 aaKnown RBP10.52□□□□□ -0.73
CCDC59-207ENST00000552606 RPTORQ8N122 1335 aa10.52□□□□□ -0.73
CCDC59-207ENST00000552606 JAK2O60674 1132 aa10.51□□□□□ -0.73
CCDC59-207ENST00000552606 CDKL5O76039 1030 aa10.51□□□□□ -0.73
CCDC59-207ENST00000552606 DEXIO95424 95 aa10.51□□□□□ -0.73
CCDC59-207ENST00000552606 SNAI1O95863 264 aaPredicted RBP10.51□□□□□ -0.73
CCDC59-207ENST00000552606 CFBP00751 764 aa10.51□□□□□ -0.73
CCDC59-207ENST00000552606 CALML3P27482 149 aa10.51□□□□□ -0.73
CCDC59-207ENST00000552606 HOXA13P31271 388 aaPredicted RBP10.51□□□□□ -0.73
CCDC59-207ENST00000552606 CYP2C19P33261 490 aa10.51□□□□□ -0.73
CCDC59-207ENST00000552606 CLK2P49760 499 aaKnown RBP10.51□□□□□ -0.73
CCDC59-207ENST00000552606 NAPAP54920 295 aa10.51□□□□□ -0.73
CCDC59-207ENST00000552606 CACNB2Q08289 660 aaPredicted RBP10.51□□□□□ -0.73
CCDC59-207ENST00000552606 SSRP1Q08945 709 aaKnown RBP10.51□□□□□ -0.73
CCDC59-207ENST00000552606 MTFR1Q15390 333 aa10.51□□□□□ -0.73
CCDC59-207ENST00000552606 NPY5RQ15761 445 aa10.51□□□□□ -0.73
CCDC59-207ENST00000552606 CPLX2Q6PUV4 134 aaKnown RBP10.51□□□□□ -0.73
CCDC59-207ENST00000552606 ARMCX2Q7L311 632 aa10.51□□□□□ -0.73
CCDC59-207ENST00000552606 TEX2Q8IWB9 1127 aa10.51□□□□□ -0.73
CCDC59-207ENST00000552606 CCDC83Q8IWF9 413 aa10.51□□□□□ -0.73
CCDC59-207ENST00000552606 TRIM22Q8IYM9 498 aa10.51□□□□□ -0.73
CCDC59-207ENST00000552606 TNS4Q8IZW8 715 aa10.51□□□□□ -0.73
CCDC59-207ENST00000552606 DNERQ8NFT8 737 aa10.51□□□□□ -0.73
CCDC59-207ENST00000552606 SMARCC2Q8TAQ2 1214 aa10.51□□□□□ -0.73
CCDC59-207ENST00000552606 AIFM3Q96NN9 605 aa10.51□□□□□ -0.73
CCDC59-207ENST00000552606 TINF2Q9BSI4 451 aa10.51□□□□□ -0.73
CCDC59-207ENST00000552606 PAK6Q9NQU5 681 aaPredicted RBP10.51□□□□□ -0.73
CCDC59-207ENST00000552606 GCOM1H8Y6P7 765 aaPredicted RBP10.5□□□□□ -0.73
CCDC59-207ENST00000552606 ADAMTS3O15072 1205 aa10.5□□□□□ -0.73
CCDC59-207ENST00000552606 POLR2MP0CAP2 368 aa10.5□□□□□ -0.73
CCDC59-207ENST00000552606 ZNF865P0CJ78 1059 aaPredicted RBP10.5□□□□□ -0.73
CCDC59-207ENST00000552606 MCM2P49736 904 aa10.5□□□□□ -0.73
CCDC59-207ENST00000552606 UBE2SQ16763 222 aa10.5□□□□□ -0.73
CCDC59-207ENST00000552606 IER5LQ5T953 404 aa10.5□□□□□ -0.73
CCDC59-207ENST00000552606 MFSD14CQ5VZR4 134 aa10.5□□□□□ -0.73
CCDC59-207ENST00000552606 USP17L6PQ6QN14 398 aa10.5□□□□□ -0.73
CCDC59-207ENST00000552606 FAM177A1Q8N128 213 aaPredicted RBP10.5□□□□□ -0.73
CCDC59-207ENST00000552606 IL31RAQ8NI17 732 aa10.5□□□□□ -0.73
CCDC59-207ENST00000552606 TMX3Q96JJ7 454 aa10.5□□□□□ -0.73
CCDC59-207ENST00000552606 TAAR1Q96RJ0 339 aa10.5□□□□□ -0.73
CCDC59-207ENST00000552606 ZMYND12Q9H0C1 365 aa10.5□□□□□ -0.73
CCDC59-207ENST00000552606 UNC93B1Q9H1C4 597 aa10.5□□□□□ -0.73
CCDC59-207ENST00000552606 RIC8AQ9NPQ8 531 aa10.5□□□□□ -0.73
CCDC59-207ENST00000552606 SH3GLB2Q9NR46 395 aa10.5□□□□□ -0.73
CCDC59-207ENST00000552606 PXMP2Q9NR77 195 aa10.5□□□□□ -0.73
CCDC59-207ENST00000552606 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.5□□□□□ -0.73
CCDC59-207ENST00000552606 VPS54Q9P1Q0 977 aa10.5□□□□□ -0.73
CCDC59-207ENST00000552606 NRBP1Q9UHY1 535 aa10.5□□□□□ -0.73
CCDC59-207ENST00000552606 ASB14A6NK59 587 aa10.49□□□□□ -0.73
CCDC59-207ENST00000552606 M0R2N6 131 aa10.49□□□□□ -0.73
CCDC59-207ENST00000552606 CCL5P13501 91 aa10.49□□□□□ -0.73
CCDC59-207ENST00000552606 CCND3P30281 292 aaPredicted RBP10.49□□□□□ -0.73
CCDC59-207ENST00000552606 ADCY7P51828 1080 aa10.49□□□□□ -0.73
CCDC59-207ENST00000552606 UBXN2AP68543 259 aa10.49□□□□□ -0.73
CCDC59-207ENST00000552606 AKAP17AQ02040 695 aaKnown RBP10.49□□□□□ -0.73
CCDC59-207ENST00000552606 CCDC148Q8NFR7 591 aa10.49□□□□□ -0.73
CCDC59-207ENST00000552606 CUL5Q93034 780 aa10.49□□□□□ -0.73
CCDC59-207ENST00000552606 RMDN3Q96TC7 470 aa10.49□□□□□ -0.73
CCDC59-207ENST00000552606 PDCD2LQ9BRP1 358 aa10.49□□□□□ -0.73
CCDC59-207ENST00000552606 LLPHQ9BRT6 129 aaKnown RBP10.49□□□□□ -0.73
CCDC59-207ENST00000552606 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.49□□□□□ -0.73
CCDC59-207ENST00000552606 PSTPIP2Q9H939 334 aa10.49□□□□□ -0.73
CCDC59-207ENST00000552606 ORC3Q9UBD5 711 aaPredicted RBP10.49□□□□□ -0.73
CCDC59-207ENST00000552606 ADD3Q9UEY8 706 aaKnown RBP10.49□□□□□ -0.73
CCDC59-207ENST00000552606 SCN10AQ9Y5Y9 1956 aa10.48□□□□□ -0.73
CCDC59-207ENST00000552606 SMCO2A6NFE2 343 aa10.48□□□□□ -0.73
CCDC59-207ENST00000552606 ADCY6O43306 1168 aa10.48□□□□□ -0.73
CCDC59-207ENST00000552606 EIF2AK2P19525 551 aaKnown RBP10.48□□□□□ -0.73
CCDC59-207ENST00000552606 CUL4AQ13619 759 aa10.48□□□□□ -0.73
CCDC59-207ENST00000552606 PGM5Q15124 567 aa10.48□□□□□ -0.73
CCDC59-207ENST00000552606 FBXO16Q8IX29 292 aaPredicted RBP10.48□□□□□ -0.73
CCDC59-207ENST00000552606 DAGLBQ8NCG7 672 aa10.48□□□□□ -0.73
CCDC59-207ENST00000552606 NSUN6Q8TEA1 469 aaKnown RBP10.48□□□□□ -0.73
CCDC59-207ENST00000552606 CCDC12Q8WUD4 166 aaPredicted RBP10.48□□□□□ -0.73
CCDC59-207ENST00000552606 SNX21Q969T3 373 aa10.48□□□□□ -0.73
CCDC59-207ENST00000552606 PHF20Q9BVI0 1012 aa10.48□□□□□ -0.73
CCDC59-207ENST00000552606 ABHD16BQ9H3Z7 469 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms