RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 TMTC2Q8N394 836 aa16.15■□□□□ 0.18
SMARCC2-212ENST00000552566 KIF2CQ99661 725 aa16.15■□□□□ 0.18
SMARCC2-212ENST00000552566 WDR11Q9BZH6 1224 aa16.15■□□□□ 0.18
SMARCC2-212ENST00000552566 TRPV6Q9H1D0 765 aa16.15■□□□□ 0.18
SMARCC2-212ENST00000552566 KAT14Q9H8E8 782 aa16.15■□□□□ 0.18
SMARCC2-212ENST00000552566 PNMA2Q9UL42 364 aa16.15■□□□□ 0.18
SMARCC2-212ENST00000552566 SNHG28P0DPA3 235 aa16.14■□□□□ 0.17
SMARCC2-212ENST00000552566 RPS6P62753 249 aaKnown RBP16.14■□□□□ 0.17
SMARCC2-212ENST00000552566 DUSP28Q4G0W2 176 aa16.14■□□□□ 0.17
SMARCC2-212ENST00000552566 TMEM67Q5HYA8 995 aa16.14■□□□□ 0.17
SMARCC2-212ENST00000552566 SYNE3Q6ZMZ3 975 aa16.14■□□□□ 0.17
SMARCC2-212ENST00000552566 NFXL1Q6ZNB6 911 aa16.14■□□□□ 0.17
SMARCC2-212ENST00000552566 C16orf59Q7L2K0 433 aa16.14■□□□□ 0.17
SMARCC2-212ENST00000552566 CHST3Q7LGC8 479 aa16.14■□□□□ 0.17
SMARCC2-212ENST00000552566 DGKHQ86XP1 1220 aa16.14■□□□□ 0.17
SMARCC2-212ENST00000552566 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.14■□□□□ 0.17
SMARCC2-212ENST00000552566 MAFAQ8NHW3 353 aaPredicted RBP16.14■□□□□ 0.17
SMARCC2-212ENST00000552566 MORC4Q8TE76 937 aa16.14■□□□□ 0.17
SMARCC2-212ENST00000552566 HIPK3Q9H422 1215 aa16.14■□□□□ 0.17
SMARCC2-212ENST00000552566 DAXXQ9UER7 740 aaPredicted RBP16.14■□□□□ 0.17
SMARCC2-212ENST00000552566 Q9Y3F1 56 aa16.14■□□□□ 0.17
SMARCC2-212ENST00000552566 LAMA4Q16363 1823 aa16.14■□□□□ 0.17
SMARCC2-212ENST00000552566 DHX16O60231 1041 aaKnown RBP16.13■□□□□ 0.17
SMARCC2-212ENST00000552566 CD4P01730 458 aa16.13■□□□□ 0.17
SMARCC2-212ENST00000552566 MYL3P08590 195 aa16.13■□□□□ 0.17
SMARCC2-212ENST00000552566 CPA1P15085 419 aa16.13■□□□□ 0.17
SMARCC2-212ENST00000552566 DNAJB2P25686 324 aa16.13■□□□□ 0.17
SMARCC2-212ENST00000552566 EXOSC10Q01780 885 aaKnown RBP16.13■□□□□ 0.17
SMARCC2-212ENST00000552566 BECN1Q14457 450 aa16.13■□□□□ 0.17
SMARCC2-212ENST00000552566 WTAPQ15007 396 aa16.13■□□□□ 0.17
SMARCC2-212ENST00000552566 TMEM240Q5SV17 173 aa16.13■□□□□ 0.17
SMARCC2-212ENST00000552566 GPATCH4Q5T3I0 446 aaKnown RBP16.13■□□□□ 0.17
SMARCC2-212ENST00000552566 Q6ZUG5 572 aa16.13■□□□□ 0.17
SMARCC2-212ENST00000552566 ZNF365Q70YC5 407 aa16.13■□□□□ 0.17
SMARCC2-212ENST00000552566 SLC43A3Q8NBI5 491 aa16.13■□□□□ 0.17
SMARCC2-212ENST00000552566 PNMA1Q8ND90 353 aa16.13■□□□□ 0.17
SMARCC2-212ENST00000552566 ZSCAN10Q96SZ4 725 aaPredicted RBP16.13■□□□□ 0.17
SMARCC2-212ENST00000552566 MPHOSPH6Q99547 160 aaKnown RBP16.13■□□□□ 0.17
SMARCC2-212ENST00000552566 RBM19Q9Y4C8 960 aaKnown RBP16.13■□□□□ 0.17
SMARCC2-212ENST00000552566 GRIN2DO15399 1336 aa16.13■□□□□ 0.17
SMARCC2-212ENST00000552566 COL6A3P12111 3177 aa16.13■□□□□ 0.17
SMARCC2-212ENST00000552566 CCDC69A6NI79 296 aa16.12■□□□□ 0.17
SMARCC2-212ENST00000552566 FOSL2P15408 326 aa16.12■□□□□ 0.17
SMARCC2-212ENST00000552566 CCL23P55773 120 aa16.12■□□□□ 0.17
SMARCC2-212ENST00000552566 CYB5R4Q7L1T6 521 aa16.12■□□□□ 0.17
SMARCC2-212ENST00000552566 HSCBQ8IWL3 235 aa16.12■□□□□ 0.17
SMARCC2-212ENST00000552566 OR6J1Q8NGC5 347 aa16.12■□□□□ 0.17
SMARCC2-212ENST00000552566 ALDH8A1Q9H2A2 487 aaPredicted RBP16.12■□□□□ 0.17
SMARCC2-212ENST00000552566 VAT1LQ9HCJ6 419 aa16.12■□□□□ 0.17
SMARCC2-212ENST00000552566 GPHNQ9NQX3 736 aaPredicted RBP16.12■□□□□ 0.17
SMARCC2-212ENST00000552566 NAP1L2Q9ULW6 460 aaPredicted RBP16.12■□□□□ 0.17
SMARCC2-212ENST00000552566 UMODL1Q5DID0 1318 aa16.12■□□□□ 0.17
SMARCC2-212ENST00000552566 LTBP2Q14767 1821 aa16.12■□□□□ 0.17
SMARCC2-212ENST00000552566 GRXCR1A8MXD5 290 aa16.11■□□□□ 0.17
SMARCC2-212ENST00000552566 B4GALT4O60513 344 aa16.11■□□□□ 0.17
SMARCC2-212ENST00000552566 CPT1AP50416 773 aa16.11■□□□□ 0.17
SMARCC2-212ENST00000552566 PPP2R5BQ15173 497 aa16.11■□□□□ 0.17
SMARCC2-212ENST00000552566 CDC37Q16543 378 aaPredicted RBP16.11■□□□□ 0.17
SMARCC2-212ENST00000552566 IFIT1BQ5T764 474 aaKnown RBP16.11■□□□□ 0.17
SMARCC2-212ENST00000552566 PSRC1Q6PGN9 363 aaPredicted RBP16.11■□□□□ 0.17
SMARCC2-212ENST00000552566 TIFAQ96CG3 184 aa16.11■□□□□ 0.17
SMARCC2-212ENST00000552566 TCEANC2Q96MN5 208 aa16.11■□□□□ 0.17
SMARCC2-212ENST00000552566 LRRC2Q9BYS8 371 aa16.11■□□□□ 0.17
SMARCC2-212ENST00000552566 IL23AQ9NPF7 189 aa16.11■□□□□ 0.17
SMARCC2-212ENST00000552566 POLR3EQ9NVU0 708 aa16.11■□□□□ 0.17
SMARCC2-212ENST00000552566 MYH4Q9Y623 1939 aa16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 TMEM265A0A087WTH1 108 aa16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 LOC102724159A0A0B4J2E5 919 aa16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 B4DLN1 442 aa16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 FGBP02675 491 aa16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 PBX2P40425 430 aa16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 LIFRP42702 1097 aa16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 MRPL12P52815 198 aaKnown RBP16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 AK2P54819 239 aa16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 CHMP4BP1P59074 171 aa16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 GRIN2CQ14957 1233 aa16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 PWP2Q15269 919 aaKnown RBP16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 BRDTQ58F21 947 aaPredicted RBP16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 FAM47CQ5HY64 1035 aa16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 ADGRF4Q8IZF3 695 aa16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 ENAHQ8N8S7 591 aaPredicted RBP16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 DNERQ8NFT8 737 aa16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 COPS5Q92905 334 aa16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 BRF1Q92994 677 aa16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 ZSCAN31Q96LW9 406 aaPredicted RBP16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 SEZ6LQ9BYH1 1024 aa16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 LIMCH1Q9UPQ0 1083 aa16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 TNKSO95271 1327 aa16.1■□□□□ 0.17
SMARCC2-212ENST00000552566 RBM47A0AV96 593 aaKnown RBP16.09■□□□□ 0.17
SMARCC2-212ENST00000552566 PARP1P09874 1014 aaKnown RBP16.09■□□□□ 0.17
SMARCC2-212ENST00000552566 TXNP10599 105 aaKnown RBP16.09■□□□□ 0.17
SMARCC2-212ENST00000552566 ANTXR2P58335 489 aa16.09■□□□□ 0.17
SMARCC2-212ENST00000552566 PURAQ00577 322 aaKnown RBP16.09■□□□□ 0.17
SMARCC2-212ENST00000552566 OTOP2Q7RTS6 562 aa16.09■□□□□ 0.17
SMARCC2-212ENST00000552566 CATIPQ7Z7H3 387 aa16.09■□□□□ 0.17
SMARCC2-212ENST00000552566 FBXL16Q8N461 479 aa16.09■□□□□ 0.17
SMARCC2-212ENST00000552566 SCFD2Q8WU76 684 aa16.09■□□□□ 0.17
SMARCC2-212ENST00000552566 PPP1R13LQ8WUF5 828 aa16.09■□□□□ 0.17
SMARCC2-212ENST00000552566 TBC1D5Q92609 795 aa16.09■□□□□ 0.17
SMARCC2-212ENST00000552566 MTG1Q9BT17 334 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms