RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 ALAS1P13196 640 aa14.34□□□□□ -0.11
CACNB3-223ENST00000552480 UBA7P41226 1012 aa14.34□□□□□ -0.11
CACNB3-223ENST00000552480 TECP42680 631 aa14.34□□□□□ -0.11
CACNB3-223ENST00000552480 TXKP42681 527 aa14.34□□□□□ -0.11
CACNB3-223ENST00000552480 NLRP12P59046 1061 aa14.34□□□□□ -0.11
CACNB3-223ENST00000552480 PPIL2Q13356 520 aa14.34□□□□□ -0.11
CACNB3-223ENST00000552480 PDIA5Q14554 519 aa14.34□□□□□ -0.11
CACNB3-223ENST00000552480 SH3RF1Q7Z6J0 888 aa14.34□□□□□ -0.11
CACNB3-223ENST00000552480 CABP7Q86V35 215 aa14.34□□□□□ -0.11
CACNB3-223ENST00000552480 FCHSD1Q86WN1 690 aa14.34□□□□□ -0.11
CACNB3-223ENST00000552480 CPXCR1Q8N123 301 aa14.34□□□□□ -0.11
CACNB3-223ENST00000552480 PROCA1Q8NCQ7 364 aaPredicted RBP14.34□□□□□ -0.11
CACNB3-223ENST00000552480 TBC1D5Q92609 795 aa14.34□□□□□ -0.11
CACNB3-223ENST00000552480 ANP32BQ92688 251 aaKnown RBP14.34□□□□□ -0.11
CACNB3-223ENST00000552480 HAS1Q92839 578 aa14.34□□□□□ -0.11
CACNB3-223ENST00000552480 DNAJC25Q9H1X3 360 aa14.34□□□□□ -0.11
CACNB3-223ENST00000552480 KCNMB3Q9NPA1 279 aa14.34□□□□□ -0.11
CACNB3-223ENST00000552480 DISC1Q9NRI5 854 aa14.34□□□□□ -0.11
CACNB3-223ENST00000552480 MAP3K20Q9NYL2 800 aaKnown RBP14.34□□□□□ -0.11
CACNB3-223ENST00000552480 CCDC39Q9UFE4 941 aa14.34□□□□□ -0.11
CACNB3-223ENST00000552480 A0A0G2JMZ2 1700 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 A0A0G2JLL6 359 aaPredicted RBP14.33□□□□□ -0.12
CACNB3-223ENST00000552480 UNCXA6NJT0 531 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 PP2D1A8MPX8 630 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 ATP2A1O14983 1001 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 TBX3O15119 743 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 FOXN1O15353 648 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 PRR29P0C7W0 189 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 KARSQ15046 597 aaKnown RBP14.33□□□□□ -0.12
CACNB3-223ENST00000552480 NT5DC1Q5TFE4 455 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 PDXDC2PQ6P474 469 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 C11orf57Q6ZUT1 292 aaPredicted RBP14.33□□□□□ -0.12
CACNB3-223ENST00000552480 MOB2Q70IA6 237 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 PRRT2Q7Z6L0 340 aaPredicted RBP14.33□□□□□ -0.12
CACNB3-223ENST00000552480 SLFN12Q8IYM2 578 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 CNKSR2Q8WXI2 1034 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 PAGE5Q96GU1 130 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 CLMNQ96JQ2 1002 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 CUEDC2Q9H467 287 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 CBX8Q9HC52 389 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 HOXC10Q9NYD6 342 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 LRWD1Q9UFC0 647 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 KCNH4Q9UQ05 1017 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 RABGAP1Q9Y3P9 1069 aa14.33□□□□□ -0.12
CACNB3-223ENST00000552480 COL11A1P12107 1806 aaPredicted RBP14.32□□□□□ -0.12
CACNB3-223ENST00000552480 SPDYE16A6NNV3 312 aaPredicted RBP14.32□□□□□ -0.12
CACNB3-223ENST00000552480 NFIBO00712 420 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 MARCH6O60337 910 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 SMC2O95347 1197 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 POTEIP0CG38 1075 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 POTEJP0CG39 1038 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 CDC25AP30304 524 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 STAT6P42226 847 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 ZNF165P49910 485 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 TKFCQ3LXA3 575 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 MUM1L1Q5H9M0 696 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 LDLRAD1Q5T700 205 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 RRAGBQ5VZM2 374 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 GRAMD1CQ8IYS0 662 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 RASSF8Q8NHQ8 419 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 ETNPPLQ8TBG4 499 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 SMARCE1Q969G3 411 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 OTUD5Q96G74 571 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 WNK4Q96J92 1243 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 TRERF1Q96PN7 1200 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 MAF1Q9H063 256 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 NAT10Q9H0A0 1025 aaKnown RBP14.32□□□□□ -0.12
CACNB3-223ENST00000552480 TTC12Q9H892 705 aaPredicted RBP14.32□□□□□ -0.12
CACNB3-223ENST00000552480 MAGEF1Q9HAY2 307 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.32□□□□□ -0.12
CACNB3-223ENST00000552480 PCDHA5Q9Y5H7 936 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 RPTORQ8N122 1335 aa14.32□□□□□ -0.12
CACNB3-223ENST00000552480 FAM86B1E9PN63 330 aa14.31□□□□□ -0.12
CACNB3-223ENST00000552480 BIN1O00499 593 aa14.31□□□□□ -0.12
CACNB3-223ENST00000552480 IRF6O14896 467 aa14.31□□□□□ -0.12
CACNB3-223ENST00000552480 SLC26A4O43511 780 aa14.31□□□□□ -0.12
CACNB3-223ENST00000552480 FAM86B2P0C5J1 330 aa14.31□□□□□ -0.12
CACNB3-223ENST00000552480 HOXA7P31268 230 aaPredicted RBP14.31□□□□□ -0.12
CACNB3-223ENST00000552480 ZNF76P36508 570 aa14.31□□□□□ -0.12
CACNB3-223ENST00000552480 SARSP49591 514 aaKnown RBP14.31□□□□□ -0.12
CACNB3-223ENST00000552480 PRR16Q569H4 304 aa14.31□□□□□ -0.12
CACNB3-223ENST00000552480 TREML2Q5T2D2 321 aa14.31□□□□□ -0.12
CACNB3-223ENST00000552480 MAP1SQ66K74 1059 aaPredicted RBP14.31□□□□□ -0.12
CACNB3-223ENST00000552480 SNRNP48Q6IEG0 339 aaKnown RBP14.31□□□□□ -0.12
CACNB3-223ENST00000552480 GADL1Q6ZQY3 521 aa14.31□□□□□ -0.12
CACNB3-223ENST00000552480 TRIML1Q8N9V2 468 aa14.31□□□□□ -0.12
CACNB3-223ENST00000552480 SPATA20Q8TB22 786 aa14.31□□□□□ -0.12
CACNB3-223ENST00000552480 LENG9Q96B70 501 aa14.31□□□□□ -0.12
CACNB3-223ENST00000552480 CALML4Q96GE6 196 aa14.31□□□□□ -0.12
CACNB3-223ENST00000552480 BPIFA3Q9BQP9 254 aa14.31□□□□□ -0.12
CACNB3-223ENST00000552480 MMTAG2Q9BU76 263 aaKnown RBP14.31□□□□□ -0.12
CACNB3-223ENST00000552480 RRAGCQ9HB90 399 aa14.31□□□□□ -0.12
CACNB3-223ENST00000552480 HOMER2Q9NSB8 354 aa14.31□□□□□ -0.12
CACNB3-223ENST00000552480 RNF146Q9NTX7 359 aa14.31□□□□□ -0.12
CACNB3-223ENST00000552480 ZNF214Q9UL59 606 aaPredicted RBP14.31□□□□□ -0.12
CACNB3-223ENST00000552480 FRMPD4Q14CM0 1322 aa14.31□□□□□ -0.12
CACNB3-223ENST00000552480 SMCHD1A6NHR9 2005 aa14.31□□□□□ -0.12
CACNB3-223ENST00000552480 IGLV3-22A0A075B6J6 115 aa14.3□□□□□ -0.12
CACNB3-223ENST00000552480 A0A087WWV3 80 aa14.3□□□□□ -0.12
CACNB3-223ENST00000552480 GTPBP6O43824 516 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms