RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 MCM6Q14566 821 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 TMEM119Q4V9L6 283 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 FKBP1CQ5VVH2 108 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 PPFIBP1Q86W92 1011 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 IRF2BP1Q8IU81 584 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 NIM1KQ8IY84 436 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 MTMR14Q8NCE2 650 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 AGBL3Q8NEM8 1001 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 SNX29Q8TEQ0 813 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 NUDT12Q9BQG2 462 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 ARHGEF10LQ9HCE6 1279 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 N4BP3O15049 544 aa15.71■□□□□ 0.11
RAB3IP-216ENST00000552199 MARCH6O60337 910 aa15.71■□□□□ 0.11
RAB3IP-216ENST00000552199 TUBB4AP04350 444 aa15.71■□□□□ 0.11
RAB3IP-216ENST00000552199 PPP1R2P41236 205 aa15.71■□□□□ 0.11
RAB3IP-216ENST00000552199 MMP14P50281 582 aa15.71■□□□□ 0.11
RAB3IP-216ENST00000552199 RBL2Q08999 1139 aa15.71■□□□□ 0.11
RAB3IP-216ENST00000552199 COBLL1Q53SF7 1204 aa15.71■□□□□ 0.11
RAB3IP-216ENST00000552199 TTI2Q6NXR4 508 aa15.71■□□□□ 0.11
RAB3IP-216ENST00000552199 LARP4BQ92615 738 aaKnown RBP15.71■□□□□ 0.11
RAB3IP-216ENST00000552199 RAD54LQ92698 747 aa15.71■□□□□ 0.11
RAB3IP-216ENST00000552199 MBOAT7Q96N66 472 aa15.71■□□□□ 0.11
RAB3IP-216ENST00000552199 PANX2Q96RD6 677 aa15.71■□□□□ 0.11
RAB3IP-216ENST00000552199 VPS16Q9H269 839 aa15.71■□□□□ 0.11
RAB3IP-216ENST00000552199 THAP9Q9H5L6 903 aa15.71■□□□□ 0.11
RAB3IP-216ENST00000552199 TAB2Q9NYJ8 693 aa15.71■□□□□ 0.11
RAB3IP-216ENST00000552199 PCDHA12Q9UN75 941 aa15.71■□□□□ 0.11
RAB3IP-216ENST00000552199 ITIH6Q6UXX5 1313 aa15.71■□□□□ 0.11
RAB3IP-216ENST00000552199 MYMKA6NI61 221 aa15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 STK4Q13043 487 aa15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 MOXD1Q6UVY6 613 aa15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 KIF18AQ8NI77 898 aa15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 NOC3LQ8WTT2 800 aaKnown RBP15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 CRYGNQ8WXF5 182 aa15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 TMX2Q9Y320 296 aa15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 PVALEFA0A1B0GWK0 134 aa15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 CTIFO43310 598 aaKnown RBP15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 TBC1D12O60347 775 aa15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 CCNE1P24864 410 aa15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 ECE1P42892 770 aa15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 RBM10P98175 930 aaKnown RBP15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 CNNM4Q6P4Q7 775 aa15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 REXO1L1PQ8IX06 675 aa15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 TSC1Q92574 1164 aa15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 P2RX5Q93086 422 aa15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 TRIM47Q96LD4 638 aa15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 DUSP9Q99956 384 aaKnown RBP15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 SRRTQ9BXP5 876 aaKnown RBP15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 VEZTQ9HBM0 779 aa15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 KCNMB3Q9NPA1 279 aa15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 PIM2Q9P1W9 311 aa15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 PRR12Q9ULL5 1215 aa15.7■□□□□ 0.1
RAB3IP-216ENST00000552199 ZSCAN12O43309 604 aa15.69■□□□□ 0.1
RAB3IP-216ENST00000552199 FCER1AP12319 257 aa15.69■□□□□ 0.1
RAB3IP-216ENST00000552199 EEF1GP26641 437 aaKnown RBP15.69■□□□□ 0.1
RAB3IP-216ENST00000552199 USH1GQ495M9 461 aa15.69■□□□□ 0.1
RAB3IP-216ENST00000552199 HYIQ5T013 277 aa15.69■□□□□ 0.1
RAB3IP-216ENST00000552199 UNC13DQ70J99 1090 aa15.69■□□□□ 0.1
RAB3IP-216ENST00000552199 FAM83AQ86UY5 434 aa15.69■□□□□ 0.1
RAB3IP-216ENST00000552199 SPICE1Q8N0Z3 855 aa15.69■□□□□ 0.1
RAB3IP-216ENST00000552199 ACER1Q8TDN7 264 aa15.69■□□□□ 0.1
RAB3IP-216ENST00000552199 GJA10Q969M2 543 aa15.69■□□□□ 0.1
RAB3IP-216ENST00000552199 P2RX7Q99572 595 aaKnown RBP15.69■□□□□ 0.1
RAB3IP-216ENST00000552199 LRRC27Q9C0I9 530 aa15.69■□□□□ 0.1
RAB3IP-216ENST00000552199 ZBTB21Q9ULJ3 1066 aa15.69■□□□□ 0.1
RAB3IP-216ENST00000552199 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.69■□□□□ 0.1
RAB3IP-216ENST00000552199 BICDL2A1A5D9 508 aa15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 FOSP01100 380 aaPredicted RBP15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 TGFB2P61812 414 aa15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 ARHGAP4P98171 946 aa15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 CXCL9Q07325 125 aa15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 ECM1Q16610 540 aa15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 KIAA1755Q5JYT7 1200 aa15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 KCNK18Q7Z418 384 aa15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 CREBRFQ8IUR6 639 aa15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 ZBED3Q96IU2 234 aaPredicted RBP15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 TMEM39BQ9GZU3 492 aa15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 GOPCQ9HD26 462 aa15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 PPP2R2CQ9Y2T4 447 aa15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 SLC26A4O43511 780 aa15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 MFAP3LO75121 409 aa15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 GYPCP04921 128 aa15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 STAT2P52630 851 aa15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 ANKRD40Q6AI12 368 aa15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 KIAA0895Q8NCT3 520 aa15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 CPLX3Q8WVH0 158 aa15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 CCDC51Q96ER9 411 aa15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 NAA15Q9BXJ9 866 aaKnown RBP15.68■□□□□ 0.1
RAB3IP-216ENST00000552199 KDM3AQ9Y4C1 1321 aa15.67■□□□□ 0.1
RAB3IP-216ENST00000552199 OPLAHO14841 1288 aa15.67■□□□□ 0.1
RAB3IP-216ENST00000552199 TPM1P09493 284 aa15.67■□□□□ 0.1
RAB3IP-216ENST00000552199 HOXA7P31268 230 aaPredicted RBP15.67■□□□□ 0.1
RAB3IP-216ENST00000552199 CASP14P31944 242 aa15.67■□□□□ 0.1
RAB3IP-216ENST00000552199 DYMQ7RTS9 669 aa15.67■□□□□ 0.1
RAB3IP-216ENST00000552199 CNGA4Q8IV77 575 aa15.67■□□□□ 0.1
RAB3IP-216ENST00000552199 SLFN12Q8IYM2 578 aa15.67■□□□□ 0.1
RAB3IP-216ENST00000552199 CSGALNACT2Q8N6G5 542 aa15.67■□□□□ 0.1
RAB3IP-216ENST00000552199 NT5C3AQ9H0P0 336 aa15.67■□□□□ 0.1
RAB3IP-216ENST00000552199 MAGEC2Q9UBF1 373 aaPredicted RBP15.67■□□□□ 0.1
RAB3IP-216ENST00000552199 PGAP2Q9UHJ9 254 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms