RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 PXMP2Q9NR77 195 aa18.86■□□□□ 0.61
GCN1-209ENST00000551920 PDGFCQ9NRA1 345 aa18.86■□□□□ 0.61
GCN1-209ENST00000551920 BARHL2Q9NY43 387 aa18.86■□□□□ 0.61
GCN1-209ENST00000551920 TNRC18O15417 2968 aaPredicted RBP18.85■□□□□ 0.61
GCN1-209ENST00000551920 FRMPD4Q14CM0 1322 aa18.85■□□□□ 0.61
GCN1-209ENST00000551920 LOC102724159A0A0B4J2E5 919 aa18.85■□□□□ 0.61
GCN1-209ENST00000551920 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.85■□□□□ 0.61
GCN1-209ENST00000551920 PIK3CDO00329 1044 aa18.85■□□□□ 0.61
GCN1-209ENST00000551920 ADAMTS3O15072 1205 aa18.85■□□□□ 0.61
GCN1-209ENST00000551920 RGS19P49795 217 aa18.85■□□□□ 0.61
GCN1-209ENST00000551920 NAPAP54920 295 aa18.85■□□□□ 0.61
GCN1-209ENST00000551920 PWP2Q15269 919 aaKnown RBP18.85■□□□□ 0.61
GCN1-209ENST00000551920 UBE2SQ16763 222 aa18.85■□□□□ 0.61
GCN1-209ENST00000551920 CCDC144BQ3MJ40 725 aa18.85■□□□□ 0.61
GCN1-209ENST00000551920 TMEM63BQ5T3F8 832 aa18.85■□□□□ 0.61
GCN1-209ENST00000551920 TAPT1Q6NXT6 567 aa18.85■□□□□ 0.61
GCN1-209ENST00000551920 PPP1R18Q6NYC8 613 aa18.85■□□□□ 0.61
GCN1-209ENST00000551920 FCHSD1Q86WN1 690 aa18.85■□□□□ 0.61
GCN1-209ENST00000551920 SAMD3Q8N6K7 520 aa18.85■□□□□ 0.61
GCN1-209ENST00000551920 NSUN6Q8TEA1 469 aaKnown RBP18.85■□□□□ 0.61
GCN1-209ENST00000551920 DIS3LQ8TF46 1054 aaKnown RBP18.85■□□□□ 0.61
GCN1-209ENST00000551920 GTF3C6Q969F1 213 aa18.85■□□□□ 0.61
GCN1-209ENST00000551920 MAP3K20Q9NYL2 800 aaKnown RBP18.85■□□□□ 0.61
GCN1-209ENST00000551920 CPLX1O14810 134 aa18.84■□□□□ 0.61
GCN1-209ENST00000551920 AKR1A1P14550 325 aa18.84■□□□□ 0.61
GCN1-209ENST00000551920 ADCYAP1R1P41586 468 aa18.84■□□□□ 0.61
GCN1-209ENST00000551920 RABEP1Q15276 862 aa18.84■□□□□ 0.61
GCN1-209ENST00000551920 PDCD2LQ9BRP1 358 aa18.84■□□□□ 0.61
GCN1-209ENST00000551920 PSTPIP2Q9H939 334 aa18.84■□□□□ 0.61
GCN1-209ENST00000551920 hCG_1984214I3L0E3 225 aa18.83■□□□□ 0.6
GCN1-209ENST00000551920 MSCO60682 206 aa18.83■□□□□ 0.6
GCN1-209ENST00000551920 CD2BP2O95400 341 aaKnown RBP18.83■□□□□ 0.6
GCN1-209ENST00000551920 TFRCP02786 760 aaKnown RBP18.83■□□□□ 0.6
GCN1-209ENST00000551920 PDE4DQ08499 809 aa18.83■□□□□ 0.6
GCN1-209ENST00000551920 ARHGEF16Q5VV41 709 aa18.83■□□□□ 0.6
GCN1-209ENST00000551920 ZNF713Q8N859 430 aaPredicted RBP18.83■□□□□ 0.6
GCN1-209ENST00000551920 AIFM3Q96NN9 605 aa18.83■□□□□ 0.6
GCN1-209ENST00000551920 VTA1Q9NP79 307 aa18.83■□□□□ 0.6
GCN1-209ENST00000551920 RBM27Q9P2N5 1060 aaKnown RBP18.83■□□□□ 0.6
GCN1-209ENST00000551920 FARP2O94887 1054 aaPredicted RBP18.82■□□□□ 0.6
GCN1-209ENST00000551920 IRX5P78411 483 aaPredicted RBP18.82■□□□□ 0.6
GCN1-209ENST00000551920 PGM5Q15124 567 aa18.82■□□□□ 0.6
GCN1-209ENST00000551920 GJC2Q5T442 439 aaPredicted RBP18.82■□□□□ 0.6
GCN1-209ENST00000551920 SMARCC2Q8TAQ2 1214 aa18.82■□□□□ 0.6
GCN1-209ENST00000551920 IWS1Q96ST2 819 aa18.82■□□□□ 0.6
GCN1-209ENST00000551920 RIC8AQ9NPQ8 531 aa18.82■□□□□ 0.6
GCN1-209ENST00000551920 FAM184BQ9ULE4 1060 aa18.82■□□□□ 0.6
GCN1-209ENST00000551920 SYNRGQ9UMZ2 1314 aa18.81■□□□□ 0.6
GCN1-209ENST00000551920 NR3C2P08235 984 aa18.81■□□□□ 0.6
GCN1-209ENST00000551920 RARBP10826 455 aa18.81■□□□□ 0.6
GCN1-209ENST00000551920 SMPD1P17405 629 aa18.81■□□□□ 0.6
GCN1-209ENST00000551920 ADCY7P51828 1080 aa18.81■□□□□ 0.6
GCN1-209ENST00000551920 SSRP1Q08945 709 aaKnown RBP18.81■□□□□ 0.6
GCN1-209ENST00000551920 TRIM22Q8IYM9 498 aa18.81■□□□□ 0.6
GCN1-209ENST00000551920 CUL5Q93034 780 aa18.81■□□□□ 0.6
GCN1-209ENST00000551920 XPNPEP3Q9NQH7 507 aa18.81■□□□□ 0.6
GCN1-209ENST00000551920 VPS54Q9P1Q0 977 aa18.81■□□□□ 0.6
GCN1-209ENST00000551920 LIMCH1Q9UPQ0 1083 aa18.81■□□□□ 0.6
GCN1-209ENST00000551920 STK36Q9NRP7 1315 aa18.8■□□□□ 0.6
GCN1-209ENST00000551920 RBM47A0AV96 593 aaKnown RBP18.8■□□□□ 0.6
GCN1-209ENST00000551920 ESYT2A0FGR8 921 aa18.8■□□□□ 0.6
GCN1-209ENST00000551920 MYADML2A6NDP7 307 aa18.8■□□□□ 0.6
GCN1-209ENST00000551920 SMCO2A6NFE2 343 aa18.8■□□□□ 0.6
GCN1-209ENST00000551920 JAK2O60674 1132 aa18.8■□□□□ 0.6
GCN1-209ENST00000551920 ADAMTS4O75173 837 aa18.8■□□□□ 0.6
GCN1-209ENST00000551920 RGS20O76081 388 aa18.8■□□□□ 0.6
GCN1-209ENST00000551920 ARIH2O95376 493 aa18.8■□□□□ 0.6
GCN1-209ENST00000551920 PGK1P00558 417 aa18.8■□□□□ 0.6
GCN1-209ENST00000551920 AKAP17AQ02040 695 aaKnown RBP18.8■□□□□ 0.6
GCN1-209ENST00000551920 NSUN7Q8NE18 718 aaKnown RBP18.8■□□□□ 0.6
GCN1-209ENST00000551920 ZFP91Q96JP5 570 aaPredicted RBP18.8■□□□□ 0.6
GCN1-209ENST00000551920 ZMYND12Q9H0C1 365 aa18.8■□□□□ 0.6
GCN1-209ENST00000551920 TMEM260Q9NX78 707 aa18.8■□□□□ 0.6
GCN1-209ENST00000551920 GNEQ9Y223 722 aaKnown RBP18.8■□□□□ 0.6
GCN1-209ENST00000551920 DNAH12Q6ZR08 3092 aa18.8■□□□□ 0.6
GCN1-209ENST00000551920 CTAGE5O15320 804 aa18.79■□□□□ 0.6
GCN1-209ENST00000551920 DUSP11O75319 330 aaKnown RBP18.79■□□□□ 0.6
GCN1-209ENST00000551920 CDKL5O76039 1030 aa18.79■□□□□ 0.6
GCN1-209ENST00000551920 DEXIO95424 95 aa18.79■□□□□ 0.6
GCN1-209ENST00000551920 FDPSP14324 419 aaKnown RBP18.79■□□□□ 0.6
GCN1-209ENST00000551920 CLK2P49760 499 aaKnown RBP18.79■□□□□ 0.6
GCN1-209ENST00000551920 MRPS9P82933 396 aaKnown RBP18.79■□□□□ 0.6
GCN1-209ENST00000551920 TNFAIP2Q03169 654 aa18.79■□□□□ 0.6
GCN1-209ENST00000551920 STXBP2Q15833 593 aa18.79■□□□□ 0.6
GCN1-209ENST00000551920 CPLX2Q6PUV4 134 aaKnown RBP18.79■□□□□ 0.6
GCN1-209ENST00000551920 VSIG10LQ86VR7 867 aa18.79■□□□□ 0.6
GCN1-209ENST00000551920 ANKLE1Q8NAG6 615 aa18.79■□□□□ 0.6
GCN1-209ENST00000551920 PAWRQ96IZ0 340 aaKnown RBP18.79■□□□□ 0.6
GCN1-209ENST00000551920 PGBD1Q96JS3 809 aa18.79■□□□□ 0.6
GCN1-209ENST00000551920 MPHOSPH6Q99547 160 aaKnown RBP18.79■□□□□ 0.6
GCN1-209ENST00000551920 DNM1LO00429 736 aa18.78■□□□□ 0.6
GCN1-209ENST00000551920 COL6A1P12109 1028 aa18.78■□□□□ 0.6
GCN1-209ENST00000551920 MYCLP12524 364 aaPredicted RBP18.78■□□□□ 0.6
GCN1-209ENST00000551920 LRRC41Q15345 812 aa18.78■□□□□ 0.6
GCN1-209ENST00000551920 NPY5RQ15761 445 aa18.78■□□□□ 0.6
GCN1-209ENST00000551920 CCDC62Q6P9F0 684 aa18.78■□□□□ 0.6
GCN1-209ENST00000551920 WDR11Q9BZH6 1224 aa18.78■□□□□ 0.6
GCN1-209ENST00000551920 UPF3AQ9H1J1 476 aaKnown RBP18.78■□□□□ 0.6
GCN1-209ENST00000551920 GJB4Q9NTQ9 266 aa18.78■□□□□ 0.6
GCN1-209ENST00000551920 B4DLN1 442 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms