RNA–Protein interactions for RNA: ENST00000551339.5

PFKM-222, Transcript of phosphofructokinase, muscle, human

TSL 4

Gene PFKM, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-222	ENST00000551339	CD4	P01730	458 aa		11.22	□□□□□ -0.61
PFKM-222	ENST00000551339	LIFR	P42702	1097 aa		11.22	□□□□□ -0.61
PFKM-222	ENST00000551339	MRPL12	P52815	198 aa	Known RBP	11.22	□□□□□ -0.61
PFKM-222	ENST00000551339	ITGA7	Q13683	1181 aa		11.22	□□□□□ -0.61
PFKM-222	ENST00000551339	TMEM67	Q5HYA8	995 aa		11.22	□□□□□ -0.61
PFKM-222	ENST00000551339		Q7L0L9	218 aa		11.22	□□□□□ -0.61
PFKM-222	ENST00000551339	AMN	Q9BXJ7	453 aa		11.22	□□□□□ -0.61
PFKM-222	ENST00000551339	RIOX1	Q9H6W3	641 aa		11.22	□□□□□ -0.61
PFKM-222	ENST00000551339	COL6A3	P12111	3177 aa		11.22	□□□□□ -0.61
PFKM-222	ENST00000551339	ZBTB5	O15062	677 aa		11.21	□□□□□ -0.61
PFKM-222	ENST00000551339	PRC1	O43663	620 aa		11.21	□□□□□ -0.61
PFKM-222	ENST00000551339	CYTH3	O43739	400 aa		11.21	□□□□□ -0.61
PFKM-222	ENST00000551339	HMGB1	P09429	215 aa	Known RBP	11.21	□□□□□ -0.61
PFKM-222	ENST00000551339	HSPA4	P34932	840 aa		11.21	□□□□□ -0.61
PFKM-222	ENST00000551339	GHRHR	Q02643	423 aa		11.21	□□□□□ -0.61
PFKM-222	ENST00000551339	FPGS	Q05932	587 aa		11.21	□□□□□ -0.61
PFKM-222	ENST00000551339	MFSD5	Q6N075	450 aa		11.21	□□□□□ -0.61
PFKM-222	ENST00000551339	RASEF	Q8IZ41	740 aa		11.21	□□□□□ -0.61
PFKM-222	ENST00000551339	DEFB123	Q8N688	67 aa		11.21	□□□□□ -0.61
PFKM-222	ENST00000551339	NSUN6	Q8TEA1	469 aa	Known RBP	11.21	□□□□□ -0.61
PFKM-222	ENST00000551339	SCFD2	Q8WU76	684 aa		11.21	□□□□□ -0.61
PFKM-222	ENST00000551339	COPS5	Q92905	334 aa		11.21	□□□□□ -0.61
PFKM-222	ENST00000551339	NEK1	Q96PY6	1258 aa		11.21	□□□□□ -0.61
PFKM-222	ENST00000551339	IWS1	Q96ST2	819 aa		11.21	□□□□□ -0.61
PFKM-222	ENST00000551339	RMDN3	Q96TC7	470 aa		11.21	□□□□□ -0.61
PFKM-222	ENST00000551339	MAP3K14	Q99558	947 aa		11.21	□□□□□ -0.61
PFKM-222	ENST00000551339	SEZ6L	Q9BYH1	1024 aa		11.21	□□□□□ -0.61
PFKM-222	ENST00000551339	PCDHA1	Q9Y5I3	950 aa		11.21	□□□□□ -0.61
PFKM-222	ENST00000551339	LAMA3	Q16787	3333 aa		11.21	□□□□□ -0.62
PFKM-222	ENST00000551339	LRRC37A2	A6NM11	1700 aa		11.21	□□□□□ -0.62
PFKM-222	ENST00000551339	NKRF	O15226	690 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	TLR3	O15455	904 aa	Known RBP	11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	EIF5B	O60841	1220 aa	Known RBP	11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	ARIH2	O95376	493 aa		11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	CFB	P00751	764 aa		11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	TXN	P10599	105 aa	Known RBP	11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	HSD17B4	P51659	736 aa		11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	PSMC6	P62333	389 aa		11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	PURA	Q00577	322 aa	Known RBP	11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	COL9A3	Q14050	684 aa	Predicted RBP	11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	PPP2R5B	Q15173	497 aa		11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	CCDC62	Q6P9F0	684 aa		11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	DHX32	Q7L7V1	743 aa	Known RBP	11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	CATIP	Q7Z7H3	387 aa		11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	OR6J1	Q8NGC5	347 aa		11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	PIGS	Q96S52	555 aa		11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	LY9	Q9HBG7	655 aa		11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	GPHN	Q9NQX3	736 aa	Predicted RBP	11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	MTMR10	Q9NXD2	777 aa		11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	MAP3K20	Q9NYL2	800 aa	Known RBP	11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	CUL9	Q8IWT3	2517 aa		11.2	□□□□□ -0.62
PFKM-222	ENST00000551339	PNMA6F	A0A0J9YX94	578 aa		11.19	□□□□□ -0.62
PFKM-222	ENST00000551339		A6NJR5	290 aa		11.19	□□□□□ -0.62
PFKM-222	ENST00000551339	SH2B2	O14492	632 aa	Predicted RBP	11.19	□□□□□ -0.62
PFKM-222	ENST00000551339	EIF3J	O75822	258 aa	Known RBP	11.19	□□□□□ -0.62
PFKM-222	ENST00000551339	DDAH1	O94760	285 aa		11.19	□□□□□ -0.62
PFKM-222	ENST00000551339	NR3C2	P08235	984 aa		11.19	□□□□□ -0.62
PFKM-222	ENST00000551339	CPT1A	P50416	773 aa		11.19	□□□□□ -0.62
PFKM-222	ENST00000551339	EXOSC10	Q01780	885 aa	Known RBP	11.19	□□□□□ -0.62
PFKM-222	ENST00000551339	TTLL4	Q14679	1199 aa		11.19	□□□□□ -0.62
PFKM-222	ENST00000551339	STXBP2	Q15833	593 aa		11.19	□□□□□ -0.62
PFKM-222	ENST00000551339	ARHGEF16	Q5VV41	709 aa		11.19	□□□□□ -0.62
PFKM-222	ENST00000551339	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.19	□□□□□ -0.62
PFKM-222	ENST00000551339	C16orf59	Q7L2K0	433 aa		11.19	□□□□□ -0.62
PFKM-222	ENST00000551339	SGMS1	Q86VZ5	419 aa		11.19	□□□□□ -0.62
PFKM-222	ENST00000551339	HOMER1	Q86YM7	354 aa		11.19	□□□□□ -0.62
PFKM-222	ENST00000551339	SAMD3	Q8N6K7	520 aa		11.19	□□□□□ -0.62
PFKM-222	ENST00000551339	TRPV6	Q9H1D0	765 aa		11.19	□□□□□ -0.62
PFKM-222	ENST00000551339	PXMP2	Q9NR77	195 aa		11.19	□□□□□ -0.62
PFKM-222	ENST00000551339	POLR3E	Q9NVU0	708 aa		11.19	□□□□□ -0.62
PFKM-222	ENST00000551339	CCDC69	A6NI79	296 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	B4GALT4	O60513	344 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	KPNA6	O60684	536 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	MYL3	P08590	195 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	CALM1	P0DP23	149 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	CALM2	P0DP24	149 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	CALM3	P0DP25	149 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	CSF2RA	P15509	400 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	EIF2AK2	P19525	551 aa	Known RBP	11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	SMARCA1	P28370	1054 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	KIF5B	P33176	963 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	CYP2C18	P33260	490 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	TRAF1	Q13077	416 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	LY6K	Q17RY6	165 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	ADCK5	Q3MIX3	580 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	SEPT14	Q6ZU15	432 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	ZNF654	Q8IZM8	581 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	TMEM199	Q8N511	208 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	LZTS2	Q9BRK4	669 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	MTG1	Q9BT17	334 aa	Predicted RBP	11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	MYL10	Q9BUA6	226 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	USP26	Q9BXU7	913 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	PPP1R12C	Q9BZL4	782 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	DDX41	Q9UJV9	622 aa	Known RBP	11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	SNX14	Q9Y5W7	946 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339		A0A0C4DFX4	3053 aa		11.18	□□□□□ -0.62
PFKM-222	ENST00000551339	PSMA5	P28066	241 aa		11.17	□□□□□ -0.62
PFKM-222	ENST00000551339	HOXA13	P31271	388 aa	Predicted RBP	11.17	□□□□□ -0.62
PFKM-222	ENST00000551339	GNAQ	P50148	359 aa		11.17	□□□□□ -0.62

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