RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 CHCHD3Q9NX63 227 aaKnown RBP5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 RGL1Q9NZL6 768 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 WDR17Q8IZU2 1322 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 DLC1Q96QB1 1528 aa5.94□□□□□ -1.46
LSM3P2-201ENST00000551246 FRMPD1Q5SYB0 1578 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 RIMS2Q9UQ26 1411 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 MROH1Q8NDA8 1641 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 A0A087WWV3 80 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 GPR75-ASB3A0A0A6YYF3 556 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 GOLGA6CA6NDK9 693 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 TMEM232C9JQI7 657 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 DNM1LO00429 736 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 PES1O00541 588 aaKnown RBP5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 FYB1O15117 783 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 PHACTR2O75167 634 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 CDKL5O76039 1030 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 GNAI2P04899 355 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 GOLGA6DP0CG33 693 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 PDHBP11177 359 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 ATP1A3P13637 1013 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 RPS6KB1P23443 525 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 PRKAR2BP31323 418 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 GCKP35557 465 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 MAP2K3P46734 347 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 ITIH3Q06033 890 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 PSMD2Q13200 908 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 BYSLQ13895 437 aaKnown RBP5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 PTGISQ16647 500 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 KIAA0753Q2KHM9 967 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 USPL1Q5W0Q7 1092 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 PAPD7Q5XG87 772 aaKnown RBP5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 TSHZ3Q63HK5 1081 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 RAD9BQ6WBX8 426 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 CCDC73Q6ZRK6 1079 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 SND1Q7KZF4 910 aaKnown RBP eCLIP5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 APTXQ7Z2E3 356 aaKnown RBP5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 SPATA21Q7Z572 469 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 RAB44Q7Z6P3 723 aaPredicted RBP5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 RPUSD2Q8IZ73 545 aaKnown RBP5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 GJD3Q8N144 294 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 GALNT15Q8N3T1 639 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 RASSF8Q8NHQ8 419 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 CCHCR1Q8TD31 782 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 ZNF473Q8WTR7 871 aaKnown RBP5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 CCDC12Q8WUD4 166 aaPredicted RBP5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 MRPS27Q92552 414 aaKnown RBP5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 EDEM1Q92611 657 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 BRF1Q92994 677 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 ZBTB10Q96DT7 871 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 RPGRIP1Q96KN7 1286 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 JAKMIP1Q96N16 626 aaKnown RBP5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 ALS2CR12Q96Q35 445 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 NUP58Q9BVL2 599 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 MOV10L1Q9BXT6 1211 aaKnown RBP5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 AVENQ9NQS1 362 aaPredicted RBP5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 SLC5A4Q9NY91 659 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 GOLGA6AQ9NYA3 693 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 POLIQ9UNA4 740 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 C15orf41Q9Y2V0 281 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 ASB3Q9Y575 518 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 NEXMIFQ5QGS0 1516 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 SALL1Q9NSC2 1324 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 ERCC6L2Q5T890 1561 aa5.93□□□□□ -1.46
LSM3P2-201ENST00000551246 CTAGE9A4FU28 777 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 PSMD14O00487 310 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 PPIP5K2O43314 1243 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 OPA1O60313 960 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 XYLBO75191 536 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 RNF8O76064 485 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 KIAA0754O94854 1291 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 NPTXRO95502 500 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 PAEPP09466 180 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 CCDC175P0C221 793 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 ARAFP10398 606 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 TOP1P11387 765 aaKnown RBP5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 PSMA5P28066 241 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 LSP1P33241 339 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 IL13P35225 146 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 UBASH3AP57075 661 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 CCINQ13939 588 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 COL9A3Q14050 684 aaPredicted RBP5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 NR1I3Q14994 352 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 ACCSLQ4AC99 568 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 PABPC1LQ4VXU2 614 aaKnown RBP5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 TTMPQ5BVD1 217 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 ANKRD20A8PQ5CZ79 823 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 CREB3L3Q68CJ9 461 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 CAPRIN2Q6IMN6 1127 aaKnown RBP5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 PPP4R3AQ6IN85 833 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 IQCKQ8N0W5 287 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 CMTR1Q8N1G2 835 aaKnown RBP5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 MMGT1Q8N4V1 131 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 FSIP1Q8NA03 581 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 RIN2Q8WYP3 895 aaPredicted RBP5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 PIK3R5Q8WYR1 880 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 CAVIN3Q969G5 261 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 ACDQ96AP0 544 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 BICD1Q96G01 975 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 ZNF396Q96N95 335 aaPredicted RBP5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 USP28Q96RU2 1077 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms