RNA–Protein interactions for RNA: ENST00000551043.5

CNOT2-227, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-227ENST00000551043 CC2D1AQ6P1N0 951 aaPredicted RBP21.26■□□□□ 0.99
CNOT2-227ENST00000551043 KCNK18Q7Z418 384 aa21.26■□□□□ 0.99
CNOT2-227ENST00000551043 ZHX1Q9UKY1 873 aaPredicted RBP21.26■□□□□ 0.99
CNOT2-227ENST00000551043 PCDHAC2Q9Y5I4 1007 aa21.26■□□□□ 0.99
CNOT2-227ENST00000551043 FAM196BA6NMK8 535 aa21.25■□□□□ 0.99
CNOT2-227ENST00000551043 IDEP14735 1019 aa21.25■□□□□ 0.99
CNOT2-227ENST00000551043 GABPB1Q06547 395 aaPredicted RBP21.25■□□□□ 0.99
CNOT2-227ENST00000551043 SHROOM1Q2M3G4 852 aaPredicted RBP21.25■□□□□ 0.99
CNOT2-227ENST00000551043 TEKT1Q969V4 418 aa21.25■□□□□ 0.99
CNOT2-227ENST00000551043 TTYH3Q9C0H2 523 aa21.25■□□□□ 0.99
CNOT2-227ENST00000551043 LTBP1Q14766 1721 aa21.25■□□□□ 0.99
CNOT2-227ENST00000551043 TCP10Q12799 353 aa21.25■□□□□ 0.99
CNOT2-227ENST00000551043 PDIA5Q14554 519 aa21.25■□□□□ 0.99
CNOT2-227ENST00000551043 ECM1Q16610 540 aa21.25■□□□□ 0.99
CNOT2-227ENST00000551043 KRT79Q5XKE5 535 aa21.25■□□□□ 0.99
CNOT2-227ENST00000551043 FAM114A1Q8IWE2 563 aa21.25■□□□□ 0.99
CNOT2-227ENST00000551043 RAB34Q9BZG1 259 aa21.25■□□□□ 0.99
CNOT2-227ENST00000551043 DBNDD1Q9H9R9 158 aa21.25■□□□□ 0.99
CNOT2-227ENST00000551043 STK17AQ9UEE5 414 aa21.25■□□□□ 0.99
CNOT2-227ENST00000551043 SASH3O75995 380 aa21.24■□□□□ 0.99
CNOT2-227ENST00000551043 CENPPQ6IPU0 288 aa21.24■□□□□ 0.99
CNOT2-227ENST00000551043 UNC13DQ70J99 1090 aa21.24■□□□□ 0.99
CNOT2-227ENST00000551043 CEP112Q8N8E3 955 aa21.24■□□□□ 0.99
CNOT2-227ENST00000551043 CUL5Q93034 780 aa21.24■□□□□ 0.99
CNOT2-227ENST00000551043 DDX25Q9UHL0 483 aaKnown RBP21.24■□□□□ 0.99
CNOT2-227ENST00000551043 ZBTB5O15062 677 aa21.24■□□□□ 0.99
CNOT2-227ENST00000551043 HLA-DOAP06340 250 aa21.24■□□□□ 0.99
CNOT2-227ENST00000551043 NPR1P16066 1061 aa21.24■□□□□ 0.99
CNOT2-227ENST00000551043 ERCC3P19447 782 aa21.24■□□□□ 0.99
CNOT2-227ENST00000551043 CLK2P49760 499 aaKnown RBP21.24■□□□□ 0.99
CNOT2-227ENST00000551043 HERVK_113P62684 666 aa21.24■□□□□ 0.99
CNOT2-227ENST00000551043 RAD54LQ92698 747 aa21.24■□□□□ 0.99
CNOT2-227ENST00000551043 HAS1Q92839 578 aa21.24■□□□□ 0.99
CNOT2-227ENST00000551043 PSTPIP2Q9H939 334 aa21.24■□□□□ 0.99
CNOT2-227ENST00000551043 MYO1AQ9UBC5 1043 aa21.24■□□□□ 0.99
CNOT2-227ENST00000551043 FOCADQ5VW36 1801 aa21.23■□□□□ 0.99
CNOT2-227ENST00000551043 TBC1D8O95759 1140 aa21.23■□□□□ 0.99
CNOT2-227ENST00000551043 TERF2Q15554 542 aa21.23■□□□□ 0.99
CNOT2-227ENST00000551043 HHIPL2Q6UWX4 724 aa21.23■□□□□ 0.99
CNOT2-227ENST00000551043 KRT27Q7Z3Y8 459 aa21.23■□□□□ 0.99
CNOT2-227ENST00000551043 GLIS3Q8NEA6 775 aa21.23■□□□□ 0.99
CNOT2-227ENST00000551043 DDX12PQ92771 950 aa21.23■□□□□ 0.99
CNOT2-227ENST00000551043 MARCH6O60337 910 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 PPP1R2P41236 205 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 MRPL12P52815 198 aaKnown RBP21.22■□□□□ 0.99
CNOT2-227ENST00000551043 LRRC41Q15345 812 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 MEA1Q16626 185 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 GPATCH4Q5T3I0 446 aaKnown RBP21.22■□□□□ 0.99
CNOT2-227ENST00000551043 PPP4R3AQ6IN85 833 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 NUP58Q9BVL2 599 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 DNAJC18Q9H819 358 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 ARFGAP3Q9NP61 516 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 PVALEFA0A1B0GWK0 134 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 USP17L15C9J2P7 530 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 USP17L13C9JLJ4 530 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 USP17L11C9JVI0 530 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 USP17L18D6R9N7 530 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 USP17L22D6RA61 530 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 USP17L17D6RBQ6 530 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 USP17L19D6RCP7 530 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 USP17L20D6RJB6 530 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 ENC1O14682 589 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 CRKP46108 304 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 USP17L24Q0WX57 530 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 COBLL1Q53SF7 1204 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 CCDC122Q5T0U0 273 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 USP17L6PQ6QN14 398 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 COL23A1Q86Y22 540 aaPredicted RBP21.22■□□□□ 0.99
CNOT2-227ENST00000551043 KIAA0825Q8IV33 1275 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 ZSCAN29Q8IWY8 852 aaPredicted RBP21.22■□□□□ 0.99
CNOT2-227ENST00000551043 ANKZF1Q9H8Y5 726 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 NHEJ1Q9H9Q4 299 aaPredicted RBP21.22■□□□□ 0.99
CNOT2-227ENST00000551043 LRRC37AA6NMS7 1700 aa21.22■□□□□ 0.99
CNOT2-227ENST00000551043 ZBED6P86452 979 aa21.21■□□□□ 0.99
CNOT2-227ENST00000551043 PPP1R18Q6NYC8 613 aa21.21■□□□□ 0.99
CNOT2-227ENST00000551043 ZNHIT6Q9NWK9 470 aaKnown RBP21.21■□□□□ 0.99
CNOT2-227ENST00000551043 ALDH1B1P30837 517 aa21.21■□□□□ 0.99
CNOT2-227ENST00000551043 TUBB2AQ13885 445 aa21.21■□□□□ 0.99
CNOT2-227ENST00000551043 FKBP15Q5T1M5 1219 aa21.21■□□□□ 0.99
CNOT2-227ENST00000551043 ZNF771Q7L3S4 317 aaPredicted RBP21.21■□□□□ 0.99
CNOT2-227ENST00000551043 NLGN1Q8N2Q7 840 aa21.21■□□□□ 0.99
CNOT2-227ENST00000551043 RETREG2Q8NC44 543 aa21.21■□□□□ 0.99
CNOT2-227ENST00000551043 TUBB2BQ9BVA1 445 aa21.21■□□□□ 0.99
CNOT2-227ENST00000551043 HAUS4Q9H6D7 363 aa21.21■□□□□ 0.99
CNOT2-227ENST00000551043 NCAPH2Q6IBW4 605 aa21.2■□□□□ 0.98
CNOT2-227ENST00000551043 ERGIC2Q96RQ1 377 aa21.2■□□□□ 0.98
CNOT2-227ENST00000551043 HDAC6Q9UBN7 1215 aa21.2■□□□□ 0.98
CNOT2-227ENST00000551043 MYO6Q9UM54 1294 aa21.2■□□□□ 0.98
CNOT2-227ENST00000551043 PCDHA12Q9UN75 941 aa21.2■□□□□ 0.98
CNOT2-227ENST00000551043 MYO3BQ8WXR4 1341 aa21.2■□□□□ 0.98
CNOT2-227ENST00000551043 ADAMTSL1Q8N6G6 1762 aa21.2■□□□□ 0.98
CNOT2-227ENST00000551043 RCCD1A6NED2 376 aa21.2■□□□□ 0.98
CNOT2-227ENST00000551043 RBM5P52756 815 aaKnown RBP eCLIP21.2■□□□□ 0.98
CNOT2-227ENST00000551043 TMEM119Q4V9L6 283 aa21.2■□□□□ 0.98
CNOT2-227ENST00000551043 KIAA1328Q86T90 577 aa21.2■□□□□ 0.98
CNOT2-227ENST00000551043 ZNF622Q969S3 477 aaKnown RBP eCLIP21.2■□□□□ 0.983e-6■■□□□ 12.6
CNOT2-227ENST00000551043 PNKPQ96T60 521 aa21.2■□□□□ 0.98
CNOT2-227ENST00000551043 TMX4Q9H1E5 349 aaPredicted RBP21.2■□□□□ 0.98
CNOT2-227ENST00000551043 DDTLA6NHG4 134 aaPredicted RBP21.19■□□□□ 0.98
CNOT2-227ENST00000551043 RHOXF2BP0C7M4 288 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms