RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 WDR11Q9BZH6 1224 aa13.62□□□□□ -0.23
GPN3-208ENST00000550974 LMAN2LQ9H0V9 348 aa13.62□□□□□ -0.23
GPN3-208ENST00000550974 A1CFQ9NQ94 594 aaKnown RBP13.62□□□□□ -0.23
GPN3-208ENST00000550974 CFAP47Q6ZTR5 3102 aa13.62□□□□□ -0.23
GPN3-208ENST00000550974 GVINP1Q7Z2Y8 2422 aa13.61□□□□□ -0.23
GPN3-208ENST00000550974 COASYQ13057 564 aa13.61□□□□□ -0.23
GPN3-208ENST00000550974 BRDTQ58F21 947 aaPredicted RBP13.61□□□□□ -0.23
GPN3-208ENST00000550974 ASTLQ6HA08 431 aaPredicted RBP13.61□□□□□ -0.23
GPN3-208ENST00000550974 GDF6Q6KF10 455 aaPredicted RBP13.61□□□□□ -0.23
GPN3-208ENST00000550974 CCDC17Q96LX7 622 aa13.61□□□□□ -0.23
GPN3-208ENST00000550974 ACAD9Q9H845 621 aa13.61□□□□□ -0.23
GPN3-208ENST00000550974 KANSL2Q9H9L4 492 aa13.61□□□□□ -0.23
GPN3-208ENST00000550974 SLC38A10Q9HBR0 1119 aa13.61□□□□□ -0.23
GPN3-208ENST00000550974 VTA1Q9NP79 307 aa13.61□□□□□ -0.23
GPN3-208ENST00000550974 KPNA6O60684 536 aa13.6□□□□□ -0.23
GPN3-208ENST00000550974 LGR5O75473 907 aa13.6□□□□□ -0.23
GPN3-208ENST00000550974 HOXB3P14651 431 aaPredicted RBP13.6□□□□□ -0.23
GPN3-208ENST00000550974 KREMEN2Q8NCW0 462 aa13.6□□□□□ -0.23
GPN3-208ENST00000550974 DBF4BQ8NFT6 615 aa13.6□□□□□ -0.23
GPN3-208ENST00000550974 DBNDD2Q9BQY9 259 aa13.6□□□□□ -0.23
GPN3-208ENST00000550974 RIOK1Q9BRS2 568 aaKnown RBP13.6□□□□□ -0.23
GPN3-208ENST00000550974 C11orf84Q9BUA3 381 aaPredicted RBP13.6□□□□□ -0.23
GPN3-208ENST00000550974 BARX2Q9UMQ3 279 aaPredicted RBP13.6□□□□□ -0.23
GPN3-208ENST00000550974 HDAC5Q9UQL6 1122 aa13.6□□□□□ -0.23
GPN3-208ENST00000550974 VPS13AQ96RL7 3174 aa13.59□□□□□ -0.23
GPN3-208ENST00000550974 MYO5AQ9Y4I1 1855 aaKnown RBP13.59□□□□□ -0.23
GPN3-208ENST00000550974 MAGEB6P1A0A0J9YX57 407 aa13.59□□□□□ -0.23
GPN3-208ENST00000550974 DDX10Q13206 875 aaKnown RBP13.59□□□□□ -0.23
GPN3-208ENST00000550974 SDR42E1Q8WUS8 393 aa13.59□□□□□ -0.23
GPN3-208ENST00000550974 CRNKL1Q9BZJ0 848 aaKnown RBP13.59□□□□□ -0.23
GPN3-208ENST00000550974 MFSD1Q9H3U5 465 aa13.59□□□□□ -0.23
GPN3-208ENST00000550974 PKD1L2Q7Z442 2459 aa13.59□□□□□ -0.23
GPN3-208ENST00000550974 TRIP12Q14669 1992 aaPredicted RBP13.59□□□□□ -0.23
GPN3-208ENST00000550974 C5orf67F2Z3F1 127 aa13.58□□□□□ -0.24
GPN3-208ENST00000550974 F5H6K3 240 aa13.58□□□□□ -0.24
GPN3-208ENST00000550974 NDUFB10O96000 172 aa13.58□□□□□ -0.24
GPN3-208ENST00000550974 RB1P06400 928 aa13.58□□□□□ -0.24
GPN3-208ENST00000550974 SP100P23497 879 aaPredicted RBP13.58□□□□□ -0.24
GPN3-208ENST00000550974 OAZ1P54368 228 aa13.58□□□□□ -0.24
GPN3-208ENST00000550974 KLRC3Q07444 240 aa13.58□□□□□ -0.24
GPN3-208ENST00000550974 RBL2Q08999 1139 aa13.58□□□□□ -0.24
GPN3-208ENST00000550974 MBTPS1Q14703 1052 aa13.58□□□□□ -0.24
GPN3-208ENST00000550974 ANGPT1Q15389 498 aa13.58□□□□□ -0.24
GPN3-208ENST00000550974 ZNF618Q5T7W0 954 aa13.58□□□□□ -0.24
GPN3-208ENST00000550974 FIBCD1Q8N539 461 aa13.58□□□□□ -0.24
GPN3-208ENST00000550974 TOP1MTQ969P6 601 aa13.58□□□□□ -0.24
GPN3-208ENST00000550974 PPP2R3CQ969Q6 453 aa13.58□□□□□ -0.24
GPN3-208ENST00000550974 PURBQ96QR8 312 aaKnown RBP13.58□□□□□ -0.24
GPN3-208ENST00000550974 RNF146Q9NTX7 359 aa13.58□□□□□ -0.24
GPN3-208ENST00000550974 RAD50Q92878 1312 aa13.58□□□□□ -0.24
GPN3-208ENST00000550974 DMXL1Q9Y485 3027 aa13.58□□□□□ -0.24
GPN3-208ENST00000550974 NAV1Q8NEY1 1877 aa13.57□□□□□ -0.24
GPN3-208ENST00000550974 TPRP12270 2363 aaKnown RBP13.57□□□□□ -0.24
GPN3-208ENST00000550974 BMPR1AP36894 532 aa13.57□□□□□ -0.24
GPN3-208ENST00000550974 CDK8P49336 464 aa13.57□□□□□ -0.24
GPN3-208ENST00000550974 CLCN5P51795 746 aa13.57□□□□□ -0.24
GPN3-208ENST00000550974 G3BP1Q13283 466 aaKnown RBP eCLIP13.57□□□□□ -0.24
GPN3-208ENST00000550974 MTMR3Q13615 1198 aa13.57□□□□□ -0.24
GPN3-208ENST00000550974 ADGRD2Q7Z7M1 963 aa13.57□□□□□ -0.24
GPN3-208ENST00000550974 DCLK2Q8N568 766 aa13.57□□□□□ -0.24
GPN3-208ENST00000550974 EFHBQ8N7U6 833 aa13.57□□□□□ -0.24
GPN3-208ENST00000550974 CYP2W1Q8TAV3 490 aa13.57□□□□□ -0.24
GPN3-208ENST00000550974 HAUS7Q99871 368 aa13.57□□□□□ -0.24
GPN3-208ENST00000550974 SEMA4AQ9H3S1 761 aa13.57□□□□□ -0.24
GPN3-208ENST00000550974 DCP1AQ9NPI6 582 aaPredicted RBP13.57□□□□□ -0.24
GPN3-208ENST00000550974 SH2B1Q9NRF2 756 aaPredicted RBP13.57□□□□□ -0.24
GPN3-208ENST00000550974 SCN10AQ9Y5Y9 1956 aa13.57□□□□□ -0.24
GPN3-208ENST00000550974 ATG2AQ2TAZ0 1938 aa13.56□□□□□ -0.24
GPN3-208ENST00000550974 A6NJR5 290 aa13.56□□□□□ -0.24
GPN3-208ENST00000550974 BRD1O95696 1058 aa13.56□□□□□ -0.24
GPN3-208ENST00000550974 MMP1P03956 469 aa13.56□□□□□ -0.24
GPN3-208ENST00000550974 ATF7P17544 494 aaPredicted RBP13.56□□□□□ -0.24
GPN3-208ENST00000550974 KIAA0319Q5VV43 1072 aa13.56□□□□□ -0.24
GPN3-208ENST00000550974 TRAF7Q6Q0C0 670 aa13.56□□□□□ -0.24
GPN3-208ENST00000550974 RBM23Q86U06 439 aaKnown RBP13.56□□□□□ -0.24
GPN3-208ENST00000550974 UBALD2Q8IYN6 164 aa13.56□□□□□ -0.24
GPN3-208ENST00000550974 FLCNQ8NFG4 579 aa13.56□□□□□ -0.24
GPN3-208ENST00000550974 COPS5Q92905 334 aa13.56□□□□□ -0.24
GPN3-208ENST00000550974 IFIH1Q9BYX4 1025 aaKnown RBP13.56□□□□□ -0.24
GPN3-208ENST00000550974 SMOC2Q9H3U7 446 aa13.56□□□□□ -0.24
GPN3-208ENST00000550974 ANTXR1Q9H6X2 564 aa13.56□□□□□ -0.24
GPN3-208ENST00000550974 PRKRIP1Q9H875 184 aaPredicted RBP13.56□□□□□ -0.24
GPN3-208ENST00000550974 R4GN57 208 aa13.56□□□□□ -0.24
GPN3-208ENST00000550974 CHD8Q9HCK8 2581 aa13.55□□□□□ -0.24
GPN3-208ENST00000550974 GLP2RO95838 553 aa13.55□□□□□ -0.24
GPN3-208ENST00000550974 ALAS1P13196 640 aa13.55□□□□□ -0.24
GPN3-208ENST00000550974 NRIP1P48552 1158 aa13.55□□□□□ -0.24
GPN3-208ENST00000550974 TNNI3KQ59H18 835 aa13.55□□□□□ -0.24
GPN3-208ENST00000550974 SESTD1Q86VW0 696 aa13.55□□□□□ -0.24
GPN3-208ENST00000550974 IL17RAQ96F46 866 aa13.55□□□□□ -0.24
GPN3-208ENST00000550974 ZNF512BQ96KM6 892 aaPredicted RBP13.55□□□□□ -0.24
GPN3-208ENST00000550974 TRERF1Q96PN7 1200 aa13.55□□□□□ -0.24
GPN3-208ENST00000550974 MEIS3Q99687 375 aa13.55□□□□□ -0.24
GPN3-208ENST00000550974 FEM1BQ9UK73 627 aa13.55□□□□□ -0.24
GPN3-208ENST00000550974 SORCS3Q9UPU3 1222 aa13.55□□□□□ -0.24
GPN3-208ENST00000550974 FPGT-TNNI3KV9GXZ4 949 aa13.55□□□□□ -0.24
GPN3-208ENST00000550974 MYO7AQ13402 2215 aa13.55□□□□□ -0.24
GPN3-208ENST00000550974 NLRC5Q86WI3 1866 aa13.55□□□□□ -0.24
GPN3-208ENST00000550974 ACACBO00763 2458 aa13.54□□□□□ -0.24
GPN3-208ENST00000550974 CYP2D7A0A087X1C5 515 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms