RNA–Protein interactions for RNA: ENST00000550767.5

TUBA1A-207, Transcript of tubulin alpha 1a, humanhuman

TSL 1 (best) BASIC

Gene TUBA1A, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-207ENST00000550767 COL20A1Q9P218 1284 aa13.78□□□□□ -0.2
TUBA1A-207ENST00000550767 LIMCH1Q9UPQ0 1083 aa13.78□□□□□ -0.2
TUBA1A-207ENST00000550767 COLQQ9Y215 455 aaPredicted RBP13.78□□□□□ -0.2
TUBA1A-207ENST00000550767 NR2E3Q9Y5X4 410 aa13.78□□□□□ -0.2
TUBA1A-207ENST00000550767 B4DLN1 442 aa13.77□□□□□ -0.21
TUBA1A-207ENST00000550767 PPFIA3O75145 1194 aa13.77□□□□□ -0.21
TUBA1A-207ENST00000550767 SNAI1O95863 264 aaPredicted RBP13.77□□□□□ -0.21
TUBA1A-207ENST00000550767 HOXA13P31271 388 aaPredicted RBP13.77□□□□□ -0.21
TUBA1A-207ENST00000550767 MRPL12P52815 198 aaKnown RBP13.77□□□□□ -0.21
TUBA1A-207ENST00000550767 SSRP1Q08945 709 aaKnown RBP13.77□□□□□ -0.21
TUBA1A-207ENST00000550767 PRAMEF19Q5SWL8 479 aa13.77□□□□□ -0.21
TUBA1A-207ENST00000550767 TRPV1Q8NER1 839 aa13.77□□□□□ -0.21
TUBA1A-207ENST00000550767 SMARCC2Q8TAQ2 1214 aa13.77□□□□□ -0.21
TUBA1A-207ENST00000550767 NSUN6Q8TEA1 469 aaKnown RBP13.77□□□□□ -0.21
TUBA1A-207ENST00000550767 GTF3C6Q969F1 213 aa13.77□□□□□ -0.21
TUBA1A-207ENST00000550767 TAAR1Q96RJ0 339 aa13.77□□□□□ -0.21
TUBA1A-207ENST00000550767 RMDN3Q96TC7 470 aa13.77□□□□□ -0.21
TUBA1A-207ENST00000550767 ABHD16BQ9H3Z7 469 aa13.77□□□□□ -0.21
TUBA1A-207ENST00000550767 PSTPIP2Q9H939 334 aa13.77□□□□□ -0.21
TUBA1A-207ENST00000550767 BARHL2Q9NY43 387 aa13.77□□□□□ -0.21
TUBA1A-207ENST00000550767 ZHX1Q9UKY1 873 aaPredicted RBP13.77□□□□□ -0.21
TUBA1A-207ENST00000550767 OGDHLQ9ULD0 1010 aa13.77□□□□□ -0.21
TUBA1A-207ENST00000550767 STXBP3O00186 592 aa13.76□□□□□ -0.21
TUBA1A-207ENST00000550767 SEPT4O43236 478 aa13.76□□□□□ -0.21
TUBA1A-207ENST00000550767 MSCO60682 206 aa13.76□□□□□ -0.21
TUBA1A-207ENST00000550767 DEXIO95424 95 aa13.76□□□□□ -0.21
TUBA1A-207ENST00000550767 PDE4DQ08499 809 aa13.76□□□□□ -0.21
TUBA1A-207ENST00000550767 PKN1Q16512 942 aa13.76□□□□□ -0.21
TUBA1A-207ENST00000550767 ARHGEF16Q5VV41 709 aa13.76□□□□□ -0.21
TUBA1A-207ENST00000550767 FCHSD1Q86WN1 690 aa13.76□□□□□ -0.21
TUBA1A-207ENST00000550767 NECAB1Q8N987 351 aa13.76□□□□□ -0.21
TUBA1A-207ENST00000550767 MORC4Q8TE76 937 aa13.76□□□□□ -0.21
TUBA1A-207ENST00000550767 CCDC12Q8WUD4 166 aaPredicted RBP13.76□□□□□ -0.21
TUBA1A-207ENST00000550767 DDX20Q9UHI6 824 aaKnown RBP13.76□□□□□ -0.21
TUBA1A-207ENST00000550767 RANBP2P49792 3224 aaKnown RBP13.76□□□□□ -0.21
TUBA1A-207ENST00000550767 ALPK3Q96L96 1907 aa13.76□□□□□ -0.21
TUBA1A-207ENST00000550767 TRIOBPQ9H2D6 2365 aa13.75□□□□□ -0.21
TUBA1A-207ENST00000550767 PIK3CDO00329 1044 aa13.75□□□□□ -0.21
TUBA1A-207ENST00000550767 EVI5O60447 810 aa13.75□□□□□ -0.21
TUBA1A-207ENST00000550767 ZNF865P0CJ78 1059 aaPredicted RBP13.75□□□□□ -0.21
TUBA1A-207ENST00000550767 AKR1A1P14550 325 aa13.75□□□□□ -0.21
TUBA1A-207ENST00000550767 EIF2AK2P19525 551 aaKnown RBP13.75□□□□□ -0.21
TUBA1A-207ENST00000550767 EDNRBP24530 442 aa13.75□□□□□ -0.21
TUBA1A-207ENST00000550767 ADCY7P51828 1080 aa13.75□□□□□ -0.21
TUBA1A-207ENST00000550767 ACVR2BQ13705 512 aa13.75□□□□□ -0.21
TUBA1A-207ENST00000550767 TYW1BQ6NUM6 668 aa13.75□□□□□ -0.21
TUBA1A-207ENST00000550767 USP17L6PQ6QN14 398 aa13.75□□□□□ -0.21
TUBA1A-207ENST00000550767 CCDC148Q8NFR7 591 aa13.75□□□□□ -0.21
TUBA1A-207ENST00000550767 DIS3LQ8TF46 1054 aaKnown RBP13.75□□□□□ -0.21
TUBA1A-207ENST00000550767 ZSCAN31Q96LW9 406 aaPredicted RBP13.75□□□□□ -0.21
TUBA1A-207ENST00000550767 PXMP2Q9NR77 195 aa13.75□□□□□ -0.21
TUBA1A-207ENST00000550767 DDX49Q9Y6V7 483 aaKnown RBP13.75□□□□□ -0.21
TUBA1A-207ENST00000550767 STK36Q9NRP7 1315 aa13.75□□□□□ -0.21
TUBA1A-207ENST00000550767 SMCO2A6NFE2 343 aa13.74□□□□□ -0.21
TUBA1A-207ENST00000550767 MEIS2O14770 477 aa13.74□□□□□ -0.21
TUBA1A-207ENST00000550767 MNX1P50219 401 aaPredicted RBP13.74□□□□□ -0.21
TUBA1A-207ENST00000550767 FXR1P51114 621 aaKnown RBP eCLIP13.74□□□□□ -0.21
TUBA1A-207ENST00000550767 EEPD1Q7L9B9 569 aa13.74□□□□□ -0.21
TUBA1A-207ENST00000550767 TEX2Q8IWB9 1127 aa13.74□□□□□ -0.21
TUBA1A-207ENST00000550767 FBXO16Q8IX29 292 aaPredicted RBP13.74□□□□□ -0.21
TUBA1A-207ENST00000550767 IWS1Q96ST2 819 aa13.74□□□□□ -0.21
TUBA1A-207ENST00000550767 KATNBL1Q9H079 304 aa13.74□□□□□ -0.21
TUBA1A-207ENST00000550767 GLT8D2Q9H1C3 349 aa13.74□□□□□ -0.21
TUBA1A-207ENST00000550767 VTA1Q9NP79 307 aa13.74□□□□□ -0.21
TUBA1A-207ENST00000550767 RIC8AQ9NPQ8 531 aa13.74□□□□□ -0.21
TUBA1A-207ENST00000550767 SH2B1Q9NRF2 756 aaPredicted RBP13.74□□□□□ -0.21
TUBA1A-207ENST00000550767 ESYT2A0FGR8 921 aa13.73□□□□□ -0.21
TUBA1A-207ENST00000550767 SPDYE3A6NKU9 549 aa13.73□□□□□ -0.21
TUBA1A-207ENST00000550767 CTDNEP1O95476 244 aa13.73□□□□□ -0.21
TUBA1A-207ENST00000550767 MCM2P49736 904 aa13.73□□□□□ -0.21
TUBA1A-207ENST00000550767 UBE2SQ16763 222 aa13.73□□□□□ -0.21
TUBA1A-207ENST00000550767 CCDC144BQ3MJ40 725 aa13.73□□□□□ -0.21
TUBA1A-207ENST00000550767 LHX8Q68G74 356 aa13.73□□□□□ -0.21
TUBA1A-207ENST00000550767 CHRDL2Q6WN34 429 aa13.73□□□□□ -0.21
TUBA1A-207ENST00000550767 CCDC83Q8IWF9 413 aa13.73□□□□□ -0.21
TUBA1A-207ENST00000550767 PDCD2LQ9BRP1 358 aa13.73□□□□□ -0.21
TUBA1A-207ENST00000550767 C11orf49Q9H6J7 331 aa13.73□□□□□ -0.21
TUBA1A-207ENST00000550767 C6orf50Q9HD87 102 aa13.73□□□□□ -0.21
TUBA1A-207ENST00000550767 SH3GLB2Q9NR46 395 aa13.73□□□□□ -0.21
TUBA1A-207ENST00000550767 VPS54Q9P1Q0 977 aa13.73□□□□□ -0.21
TUBA1A-207ENST00000550767 FAM184BQ9ULE4 1060 aa13.73□□□□□ -0.21
TUBA1A-207ENST00000550767 NR3C2P08235 984 aa13.72□□□□□ -0.21
TUBA1A-207ENST00000550767 RARBP10826 455 aa13.72□□□□□ -0.21
TUBA1A-207ENST00000550767 GNA11P29992 359 aa13.72□□□□□ -0.21
TUBA1A-207ENST00000550767 ST3GAL1Q11201 340 aa13.72□□□□□ -0.21
TUBA1A-207ENST00000550767 PGM5Q15124 567 aa13.72□□□□□ -0.21
TUBA1A-207ENST00000550767 STXBP2Q15833 593 aa13.72□□□□□ -0.21
TUBA1A-207ENST00000550767 ANO1Q5XXA6 986 aa13.72□□□□□ -0.21
TUBA1A-207ENST00000550767 NSUN7Q8NE18 718 aaKnown RBP13.72□□□□□ -0.21
TUBA1A-207ENST00000550767 WASF1Q92558 559 aa13.72□□□□□ -0.21
TUBA1A-207ENST00000550767 ZMYND12Q9H0C1 365 aa13.72□□□□□ -0.21
TUBA1A-207ENST00000550767 EHMT1Q9H9B1 1298 aa13.72□□□□□ -0.21
TUBA1A-207ENST00000550767 ORC3Q9UBD5 711 aaPredicted RBP13.72□□□□□ -0.21
TUBA1A-207ENST00000550767 FRMPD4Q14CM0 1322 aa13.72□□□□□ -0.21
TUBA1A-207ENST00000550767 MYH7BA7E2Y1 1941 aa13.72□□□□□ -0.21
TUBA1A-207ENST00000550767 DNAH12Q6ZR08 3092 aa13.72□□□□□ -0.21
TUBA1A-207ENST00000550767 MYCLP12524 364 aaPredicted RBP13.71□□□□□ -0.21
TUBA1A-207ENST00000550767 XBP1P17861 261 aa13.71□□□□□ -0.21
TUBA1A-207ENST00000550767 CCND2P30279 289 aa13.71□□□□□ -0.21
TUBA1A-207ENST00000550767 ADCYAP1R1P41586 468 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms