RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 PLD6Q8N2A8 252 aaKnown RBP7.25□□□□□ -1.25
SCAF11-213ENST00000550629 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.25□□□□□ -1.25
SCAF11-213ENST00000550629 KCT2Q8NC54 265 aa7.25□□□□□ -1.25
SCAF11-213ENST00000550629 PLBD2Q8NHP8 589 aa7.25□□□□□ -1.25
SCAF11-213ENST00000550629 XAGE3Q8WTP9 111 aa7.25□□□□□ -1.25
SCAF11-213ENST00000550629 CRELD1Q96HD1 420 aa7.25□□□□□ -1.25
SCAF11-213ENST00000550629 API5Q9BZZ5 524 aaKnown RBP7.25□□□□□ -1.25
SCAF11-213ENST00000550629 WNT10AQ9GZT5 417 aa7.25□□□□□ -1.25
SCAF11-213ENST00000550629 FBRSQ9HAH7 460 aa7.25□□□□□ -1.25
SCAF11-213ENST00000550629 PRDM10Q9NQV6 1147 aa7.25□□□□□ -1.25
SCAF11-213ENST00000550629 ZNF652Q9Y2D9 606 aa7.25□□□□□ -1.25
SCAF11-213ENST00000550629 RNF123Q5XPI4 1314 aa7.25□□□□□ -1.25
SCAF11-213ENST00000550629 PXDNLA1KZ92 1463 aa7.24□□□□□ -1.25
SCAF11-213ENST00000550629 CACNA1FO60840 1977 aa7.24□□□□□ -1.25
SCAF11-213ENST00000550629 GFRA2O00451 464 aa7.24□□□□□ -1.25
SCAF11-213ENST00000550629 BCAR3O75815 825 aa7.24□□□□□ -1.25
SCAF11-213ENST00000550629 RLBP1P12271 317 aa7.24□□□□□ -1.25
SCAF11-213ENST00000550629 RFC4P35249 363 aa7.24□□□□□ -1.25
SCAF11-213ENST00000550629 KSR2Q6VAB6 950 aa7.24□□□□□ -1.25
SCAF11-213ENST00000550629 ATF7IPQ6VMQ6 1270 aa7.24□□□□□ -1.25
SCAF11-213ENST00000550629 ARMCX6Q7L4S7 300 aa7.24□□□□□ -1.25
SCAF11-213ENST00000550629 FAM214BQ7L5A3 538 aa7.24□□□□□ -1.25
SCAF11-213ENST00000550629 PHC3Q8NDX5 983 aa7.24□□□□□ -1.25
SCAF11-213ENST00000550629 HEXIM2Q96MH2 286 aaKnown RBP7.24□□□□□ -1.25
SCAF11-213ENST00000550629 MIR1-1HGQ9H1L0 117 aa7.24□□□□□ -1.25
SCAF11-213ENST00000550629 NARFQ9UHQ1 456 aa7.24□□□□□ -1.25
SCAF11-213ENST00000550629 ATP10DQ9P241 1426 aa7.24□□□□□ -1.25
SCAF11-213ENST00000550629 MAP3K15Q6ZN16 1313 aa7.24□□□□□ -1.25
SCAF11-213ENST00000550629 USP42Q9H9J4 1324 aaKnown RBP7.24□□□□□ -1.25
SCAF11-213ENST00000550629 UBR3Q6ZT12 1888 aa7.24□□□□□ -1.25
SCAF11-213ENST00000550629 ADCY9O60503 1353 aa7.23□□□□□ -1.25
SCAF11-213ENST00000550629 SCN7AQ01118 1682 aa7.23□□□□□ -1.25
SCAF11-213ENST00000550629 MYH14Q7Z406 1995 aaKnown RBP7.23□□□□□ -1.25
SCAF11-213ENST00000550629 F6X3S4 739 aa7.23□□□□□ -1.25
SCAF11-213ENST00000550629 BIN1O00499 593 aa7.23□□□□□ -1.25
SCAF11-213ENST00000550629 TCERG1O14776 1098 aaKnown RBP7.23□□□□□ -1.25
SCAF11-213ENST00000550629 CAMTA2O94983 1202 aa7.23□□□□□ -1.25
SCAF11-213ENST00000550629 PIP4K2AP48426 406 aaPredicted RBP7.23□□□□□ -1.25
SCAF11-213ENST00000550629 OXCT1P55809 520 aa7.23□□□□□ -1.25
SCAF11-213ENST00000550629 ETF1P62495 437 aaKnown RBP7.23□□□□□ -1.25
SCAF11-213ENST00000550629 SLBPQ14493 270 aaKnown RBP eCLIP7.23□□□□□ -1.25
SCAF11-213ENST00000550629 NKG7Q16617 165 aa7.23□□□□□ -1.25
SCAF11-213ENST00000550629 HSP90AB3PQ58FF7 597 aa7.23□□□□□ -1.25
SCAF11-213ENST00000550629 ZKSCAN2Q63HK3 967 aa7.23□□□□□ -1.25
SCAF11-213ENST00000550629 TTLL7Q6ZT98 887 aa7.23□□□□□ -1.25
SCAF11-213ENST00000550629 G2E3Q7L622 706 aa7.23□□□□□ -1.25
SCAF11-213ENST00000550629 NETO1Q8TDF5 533 aa7.23□□□□□ -1.25
SCAF11-213ENST00000550629 BCL7CQ8WUZ0 217 aaPredicted RBP7.23□□□□□ -1.25
SCAF11-213ENST00000550629 JARID2Q92833 1246 aaPredicted RBP7.23□□□□□ -1.25
SCAF11-213ENST00000550629 BCL2L13Q9BXK5 485 aa7.23□□□□□ -1.25
SCAF11-213ENST00000550629 PHAXQ9H814 394 aaKnown RBP7.23□□□□□ -1.25
SCAF11-213ENST00000550629 NOB1Q9ULX3 412 aaKnown RBP7.23□□□□□ -1.25
SCAF11-213ENST00000550629 PNPLA7Q6ZV29 1317 aa7.23□□□□□ -1.25
SCAF11-213ENST00000550629 PI4KAP2A4QPH2 592 aa7.22□□□□□ -1.25
SCAF11-213ENST00000550629 PAPLNO95428 1278 aa7.22□□□□□ -1.25
SCAF11-213ENST00000550629 ANXA1P04083 346 aa7.22□□□□□ -1.25
SCAF11-213ENST00000550629 TRIM27P14373 513 aa7.22□□□□□ -1.25
SCAF11-213ENST00000550629 GRK4P32298 578 aa7.22□□□□□ -1.25
SCAF11-213ENST00000550629 CCT4P50991 539 aaKnown RBP7.22□□□□□ -1.25
SCAF11-213ENST00000550629 NEXNQ0ZGT2 675 aa7.22□□□□□ -1.25
SCAF11-213ENST00000550629 AIMP1Q12904 312 aaKnown RBP7.22□□□□□ -1.25
SCAF11-213ENST00000550629 BNIP3Q12983 259 aa7.22□□□□□ -1.25
SCAF11-213ENST00000550629 ZNF574Q6ZN55 896 aaPredicted RBP7.22□□□□□ -1.25
SCAF11-213ENST00000550629 ARHGAP27Q6ZUM4 889 aa7.22□□□□□ -1.25
SCAF11-213ENST00000550629 AMIGO3Q86WK7 504 aa7.22□□□□□ -1.25
SCAF11-213ENST00000550629 COL23A1Q86Y22 540 aaPredicted RBP7.22□□□□□ -1.25
SCAF11-213ENST00000550629 NLGN1Q8N2Q7 840 aa7.22□□□□□ -1.25
SCAF11-213ENST00000550629 PI4KAP1Q8N8J0 262 aa7.22□□□□□ -1.25
SCAF11-213ENST00000550629 LINS1Q8NG48 757 aa7.22□□□□□ -1.25
SCAF11-213ENST00000550629 GIPC2Q8TF65 315 aa7.22□□□□□ -1.25
SCAF11-213ENST00000550629 DNAAF4Q8WXU2 420 aa7.22□□□□□ -1.25
SCAF11-213ENST00000550629 FRAT1Q92837 279 aaPredicted RBP7.22□□□□□ -1.25
SCAF11-213ENST00000550629 PLAGL2Q9UPG8 496 aa7.22□□□□□ -1.25
SCAF11-213ENST00000550629 MAP3K2Q9Y2U5 619 aa7.22□□□□□ -1.25
SCAF11-213ENST00000550629 ABCC4O15439 1325 aa7.22□□□□□ -1.25
SCAF11-213ENST00000550629 C4AP0C0L4 1744 aa7.21□□□□□ -1.25
SCAF11-213ENST00000550629 BCORQ6W2J9 1755 aa7.21□□□□□ -1.25
SCAF11-213ENST00000550629 ALDH1L1O75891 902 aa7.21□□□□□ -1.26
SCAF11-213ENST00000550629 LRIG2O94898 1065 aa7.21□□□□□ -1.26
SCAF11-213ENST00000550629 EOMESO95936 686 aa7.21□□□□□ -1.26
SCAF11-213ENST00000550629 GYS1P13807 737 aa7.21□□□□□ -1.26
SCAF11-213ENST00000550629 RRP1P56182 461 aaKnown RBP7.21□□□□□ -1.26
SCAF11-213ENST00000550629 TCIRG1Q13488 830 aa7.21□□□□□ -1.26
SCAF11-213ENST00000550629 TSNAXIP1Q2TAA8 658 aa7.21□□□□□ -1.26
SCAF11-213ENST00000550629 ZNF792Q3KQV3 632 aa7.21□□□□□ -1.26
SCAF11-213ENST00000550629 PARP10Q53GL7 1025 aa7.21□□□□□ -1.26
SCAF11-213ENST00000550629 INTS3Q68E01 1043 aaKnown RBP7.21□□□□□ -1.26
SCAF11-213ENST00000550629 SPRED2Q7Z698 418 aa7.21□□□□□ -1.26
SCAF11-213ENST00000550629 WFDC3Q8IUB2 231 aa7.21□□□□□ -1.26
SCAF11-213ENST00000550629 MISP3Q96FF7 219 aa7.21□□□□□ -1.26
SCAF11-213ENST00000550629 MKNK2Q9HBH9 465 aa7.21□□□□□ -1.26
SCAF11-213ENST00000550629 SLITRK5O94991 958 aa7.2□□□□□ -1.26
SCAF11-213ENST00000550629 CEACAM5P06731 702 aa7.2□□□□□ -1.26
SCAF11-213ENST00000550629 ITIH2P19823 946 aa7.2□□□□□ -1.26
SCAF11-213ENST00000550629 CAP2P40123 477 aa7.2□□□□□ -1.26
SCAF11-213ENST00000550629 IFI16Q16666 785 aaKnown RBP7.2□□□□□ -1.26
SCAF11-213ENST00000550629 BEND3Q5T5X7 828 aa7.2□□□□□ -1.26
SCAF11-213ENST00000550629 TMCO4Q5TGY1 634 aa7.2□□□□□ -1.26
SCAF11-213ENST00000550629 HID1Q8IV36 788 aa7.2□□□□□ -1.26
SCAF11-213ENST00000550629 FTSJ3Q8IY81 847 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms