RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 MAD1L1Q9Y6D9 718 aa13.62□□□□□ -0.23
RAB3IP-212ENST00000550536 BRD1O95696 1058 aa13.62□□□□□ -0.23
RAB3IP-212ENST00000550536 MFAP3P55082 362 aa13.62□□□□□ -0.23
RAB3IP-212ENST00000550536 SPATA1Q5VX52 437 aa13.62□□□□□ -0.23
RAB3IP-212ENST00000550536 MIS18BP1Q6P0N0 1132 aa13.62□□□□□ -0.23
RAB3IP-212ENST00000550536 CNOT6LQ96LI5 555 aaKnown RBP13.62□□□□□ -0.23
RAB3IP-212ENST00000550536 TPCN1Q9ULQ1 816 aa13.62□□□□□ -0.23
RAB3IP-212ENST00000550536 MAP3K15Q6ZN16 1313 aa13.62□□□□□ -0.23
RAB3IP-212ENST00000550536 YEATS2Q9ULM3 1422 aa13.62□□□□□ -0.23
RAB3IP-212ENST00000550536 INHBAP08476 426 aa13.62□□□□□ -0.23
RAB3IP-212ENST00000550536 SERPINB6P35237 376 aa13.62□□□□□ -0.23
RAB3IP-212ENST00000550536 PDE1CQ14123 709 aaPredicted RBP13.62□□□□□ -0.23
RAB3IP-212ENST00000550536 ADAT2Q7Z6V5 191 aaKnown RBP13.62□□□□□ -0.23
RAB3IP-212ENST00000550536 CCDC127Q96BQ5 260 aa13.62□□□□□ -0.23
RAB3IP-212ENST00000550536 SF3A3Q12874 501 aaKnown RBP eCLIP13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 RAPH1Q70E73 1250 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 HDAC11Q96DB2 347 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 THRAP3Q9Y2W1 955 aaKnown RBP13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 PPEF1O14829 653 aaPredicted RBP13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 CIAO1O76071 339 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 GAP43P17677 238 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 ATP1A2P50993 1020 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 CHRNDQ07001 517 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 LRRC8CQ8TDW0 803 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 XPOTO43592 962 aaKnown RBP13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 CCND2P30279 289 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 CCDC93Q567U6 631 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 RAB44Q7Z6P3 723 aaPredicted RBP13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 GCNT4Q9P109 453 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 LUC7L3O95232 432 aaKnown RBP13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 FOSP01100 380 aaPredicted RBP13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 NRBP2Q9NSY0 501 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 TMEM232C9JQI7 657 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 TRAPPC10P48553 1259 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 TMCO4Q5TGY1 634 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 PPP1R2P3Q6NXS1 205 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 SSH3Q8TE77 659 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 CACTINQ8WUQ7 758 aaKnown RBP13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 ZNF577Q9BSK1 485 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 SESN3P58005 492 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 SCRN1Q12765 414 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 NLRP1Q9C000 1473 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 PTPROQ16827 1216 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 LARP4BQ92615 738 aaKnown RBP13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 LRGUKQ96M69 825 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 BAIAP2L1Q9UHR4 511 aa13.61□□□□□ -0.23
RAB3IP-212ENST00000550536 SYNJ2BP-COX16A0A087WUM0 186 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 COX16Q9P0S2 106 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 EVI5O60447 810 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 PTH1RQ03431 593 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 PDZD8Q8NEN9 1154 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 DDX17Q92841 729 aaKnown RBP13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 MCF2LO15068 1137 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 SMYD2Q9NRG4 433 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 TMEM63CQ9P1W3 806 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 PCDHA4Q9UN74 947 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 ZNF148Q9UQR1 794 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 ATP8B3O60423 1300 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 PHKG2P15735 406 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 ZSCAN26Q16670 478 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 ABI1Q8IZP0 508 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 AMNQ9BXJ7 453 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 HAUS4Q9H6D7 363 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 FANCLQ9NW38 375 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 PCDHA7Q9UN72 937 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 PRDM15P57071 1507 aaPredicted RBP13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 PCCAP05165 728 aaPredicted RBP13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 C10orf76Q5T2E6 689 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 GJA10Q969M2 543 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 USP44Q9H0E7 712 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 EEF1GP26641 437 aaKnown RBP13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 GNGT1P63211 74 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 RASSF7Q02833 373 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 ERBB4Q15303 1308 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 SLC8A1P32418 973 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 IFT122Q9HBG6 1241 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 EPN1Q9Y6I3 576 aaPredicted RBP13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 NR2F2P24468 414 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 IGBP1P78318 339 aa13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 JPH2Q9BR39 696 aaPredicted RBP13.6□□□□□ -0.23
RAB3IP-212ENST00000550536 ARAP3Q8WWN8 1544 aa13.59□□□□□ -0.23
RAB3IP-212ENST00000550536 H7C0C1 242 aa13.59□□□□□ -0.23
RAB3IP-212ENST00000550536 MED7O43513 233 aa13.59□□□□□ -0.23
RAB3IP-212ENST00000550536 ATP5OP48047 213 aa13.59□□□□□ -0.23
RAB3IP-212ENST00000550536 CAPN12Q6ZSI9 719 aa13.59□□□□□ -0.23
RAB3IP-212ENST00000550536 DPP9Q86TI2 863 aa13.59□□□□□ -0.23
RAB3IP-212ENST00000550536 TUBGCP2Q9BSJ2 902 aa13.59□□□□□ -0.23
RAB3IP-212ENST00000550536 ADD3Q9UEY8 706 aaKnown RBP13.59□□□□□ -0.23
RAB3IP-212ENST00000550536 ZNF233A6NK53 670 aa13.59□□□□□ -0.23
RAB3IP-212ENST00000550536 GOLGA8HP0CJ92 632 aa13.59□□□□□ -0.23
RAB3IP-212ENST00000550536 TMTC4Q5T4D3 741 aa13.59□□□□□ -0.23
RAB3IP-212ENST00000550536 SLC7A3Q8WY07 619 aa13.59□□□□□ -0.23
RAB3IP-212ENST00000550536 CCNA1P78396 465 aa13.59□□□□□ -0.23
RAB3IP-212ENST00000550536 IL9RQ01113 521 aa13.59□□□□□ -0.23
RAB3IP-212ENST00000550536 CCHCR1Q8TD31 782 aa13.59□□□□□ -0.23
RAB3IP-212ENST00000550536 CNKSR1Q969H4 720 aa13.59□□□□□ -0.23
RAB3IP-212ENST00000550536 SNX25Q9H3E2 840 aa13.59□□□□□ -0.23
RAB3IP-212ENST00000550536 SPDL1Q96EA4 605 aa13.59□□□□□ -0.23
RAB3IP-212ENST00000550536 DHTKD1Q96HY7 919 aaPredicted RBP13.59□□□□□ -0.23
RAB3IP-212ENST00000550536 CAPN7Q9Y6W3 813 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms