RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 ABCB11O95342 1321 aa26.99■■□□□ 1.91
SMARCD1-209ENST00000550477 GOLGA8HP0CJ92 632 aa26.99■■□□□ 1.91
SMARCD1-209ENST00000550477 RFC2P35250 354 aa26.99■■□□□ 1.91
SMARCD1-209ENST00000550477 NBPF20Q3BBV1 942 aa26.99■■□□□ 1.91
SMARCD1-209ENST00000550477 CWC27Q6UX04 472 aaKnown RBP26.99■■□□□ 1.91
SMARCD1-209ENST00000550477 CHD1LQ86WJ1 897 aa26.99■■□□□ 1.91
SMARCD1-209ENST00000550477 SMC5Q8IY18 1101 aa26.99■■□□□ 1.91
SMARCD1-209ENST00000550477 UBA5Q9GZZ9 404 aa26.99■■□□□ 1.91
SMARCD1-209ENST00000550477 OSBPL3Q9H4L5 887 aa26.99■■□□□ 1.91
SMARCD1-209ENST00000550477 PCDHA11Q9Y5I1 949 aa26.99■■□□□ 1.91
SMARCD1-209ENST00000550477 A6NJR5 290 aa26.98■■□□□ 1.91
SMARCD1-209ENST00000550477 DHX16O60231 1041 aaKnown RBP26.98■■□□□ 1.91
SMARCD1-209ENST00000550477 CYP2C9P11712 490 aa26.98■■□□□ 1.91
SMARCD1-209ENST00000550477 ATP2A2P16615 1042 aaKnown RBP26.98■■□□□ 1.91
SMARCD1-209ENST00000550477 BFSP2Q13515 415 aa26.98■■□□□ 1.91
SMARCD1-209ENST00000550477 IMMTQ16891 758 aaKnown RBP26.98■■□□□ 1.91
SMARCD1-209ENST00000550477 ASPRV1Q53RT3 343 aa26.98■■□□□ 1.91
SMARCD1-209ENST00000550477 ATXN2LQ8WWM7 1075 aaKnown RBP26.98■■□□□ 1.91
SMARCD1-209ENST00000550477 KDM4AO75164 1064 aa26.97■■□□□ 1.91
SMARCD1-209ENST00000550477 CDC37Q16543 378 aaPredicted RBP26.97■■□□□ 1.91
SMARCD1-209ENST00000550477 PPP2R2DQ66LE6 453 aa26.97■■□□□ 1.91
SMARCD1-209ENST00000550477 DEFB128Q7Z7B8 93 aa26.97■■□□□ 1.91
SMARCD1-209ENST00000550477 USP38Q8NB14 1042 aa26.97■■□□□ 1.91
SMARCD1-209ENST00000550477 IL27Q8NEV9 243 aa26.97■■□□□ 1.91
SMARCD1-209ENST00000550477 NSUN6Q8TEA1 469 aaKnown RBP26.97■■□□□ 1.91
SMARCD1-209ENST00000550477 KRT23Q9C075 422 aa26.97■■□□□ 1.91
SMARCD1-209ENST00000550477 NEDD4P46934 1319 aa26.96■■□□□ 1.91
SMARCD1-209ENST00000550477 PITPNM1O00562 1244 aa26.96■■□□□ 1.91
SMARCD1-209ENST00000550477 STXBP2Q15833 593 aa26.96■■□□□ 1.91
SMARCD1-209ENST00000550477 PLEKHM2Q8IWE5 1019 aa26.96■■□□□ 1.91
SMARCD1-209ENST00000550477 CCDC155Q8N6L0 562 aa26.96■■□□□ 1.91
SMARCD1-209ENST00000550477 IWS1Q96ST2 819 aa26.96■■□□□ 1.91
SMARCD1-209ENST00000550477 ZSCAN10Q96SZ4 725 aaPredicted RBP26.96■■□□□ 1.91
SMARCD1-209ENST00000550477 MRPL11Q9Y3B7 192 aaKnown RBP26.96■■□□□ 1.91
SMARCD1-209ENST00000550477 CDH23Q9H251 3354 aa26.96■■□□□ 1.91
SMARCD1-209ENST00000550477 PARP1P09874 1014 aaKnown RBP26.95■■□□□ 1.9
SMARCD1-209ENST00000550477 ANKS1AQ92625 1134 aa26.95■■□□□ 1.9
SMARCD1-209ENST00000550477 DSCC1Q9BVC3 393 aa26.95■■□□□ 1.9
SMARCD1-209ENST00000550477 CNNM2Q9H8M5 875 aa26.95■■□□□ 1.9
SMARCD1-209ENST00000550477 THEGQ9P2T0 379 aa26.95■■□□□ 1.9
SMARCD1-209ENST00000550477 KIF28PB7ZC32 967 aa26.94■■□□□ 1.9
SMARCD1-209ENST00000550477 GH1P01241 217 aa26.94■■□□□ 1.9
SMARCD1-209ENST00000550477 CHMP4BP1P59074 171 aa26.94■■□□□ 1.9
SMARCD1-209ENST00000550477 TMEM67Q5HYA8 995 aa26.94■■□□□ 1.9
SMARCD1-209ENST00000550477 ADGRF4Q8IZF3 695 aa26.94■■□□□ 1.9
SMARCD1-209ENST00000550477 COPS5Q92905 334 aa26.94■■□□□ 1.9
SMARCD1-209ENST00000550477 UBAC1Q9BSL1 405 aa26.94■■□□□ 1.9
SMARCD1-209ENST00000550477 FTOQ9C0B1 505 aaKnown RBP eCLIP26.94■■□□□ 1.9
SMARCD1-209ENST00000550477 YBX2Q9Y2T7 364 aaKnown RBP26.94■■□□□ 1.9
SMARCD1-209ENST00000550477 B4E1Z4 1266 aa26.93■■□□□ 1.9
SMARCD1-209ENST00000550477 CASTP20810 708 aaKnown RBP26.93■■□□□ 1.9
SMARCD1-209ENST00000550477 RABGGTBP53611 331 aa26.93■■□□□ 1.9
SMARCD1-209ENST00000550477 NUCB1Q02818 461 aa26.93■■□□□ 1.9
SMARCD1-209ENST00000550477 CCDC85BQ15834 202 aaPredicted RBP26.93■■□□□ 1.9
SMARCD1-209ENST00000550477 SEPT14Q6ZU15 432 aa26.93■■□□□ 1.9
SMARCD1-209ENST00000550477 FBXO11Q86XK2 927 aa26.93■■□□□ 1.9
SMARCD1-209ENST00000550477 PHOSPHO2Q8TCD6 241 aa26.93■■□□□ 1.9
SMARCD1-209ENST00000550477 SLC9A7Q96T83 725 aa26.93■■□□□ 1.9
SMARCD1-209ENST00000550477 SCN10AQ9Y5Y9 1956 aa26.93■■□□□ 1.9
SMARCD1-209ENST00000550477 MRPS5P82675 430 aaKnown RBP26.92■■□□□ 1.9
SMARCD1-209ENST00000550477 ARHGEF16Q5VV41 709 aa26.92■■□□□ 1.9
SMARCD1-209ENST00000550477 RMDN3Q96TC7 470 aa26.92■■□□□ 1.9
SMARCD1-209ENST00000550477 VAT1LQ9HCJ6 419 aa26.92■■□□□ 1.9
SMARCD1-209ENST00000550477 PRDM6Q9NQX0 595 aa26.92■■□□□ 1.9
SMARCD1-209ENST00000550477 ZSWIM5Q9P217 1185 aa26.92■■□□□ 1.9
SMARCD1-209ENST00000550477 IQCF3P0C7M6 154 aa26.91■■□□□ 1.9
SMARCD1-209ENST00000550477 CAGE1Q8TC20 777 aa26.91■■□□□ 1.9
SMARCD1-209ENST00000550477 SYTL5Q8TDW5 730 aaPredicted RBP26.91■■□□□ 1.9
SMARCD1-209ENST00000550477 TAAR1Q96RJ0 339 aa26.91■■□□□ 1.9
SMARCD1-209ENST00000550477 CPVLQ9H3G5 476 aa26.91■■□□□ 1.9
SMARCD1-209ENST00000550477 GBF1Q92538 1859 aa26.9■■□□□ 1.9
SMARCD1-209ENST00000550477 TNFRSF10AO00220 468 aa26.9■■□□□ 1.9
SMARCD1-209ENST00000550477 ADGRE1Q14246 886 aa26.9■■□□□ 1.9
SMARCD1-209ENST00000550477 PTGISQ16647 500 aa26.9■■□□□ 1.9
SMARCD1-209ENST00000550477 QRICH1Q2TAL8 776 aa26.9■■□□□ 1.9
SMARCD1-209ENST00000550477 ENAHQ8N8S7 591 aaPredicted RBP26.9■■□□□ 1.9
SMARCD1-209ENST00000550477 AFG1LQ8WV93 481 aa26.9■■□□□ 1.9
SMARCD1-209ENST00000550477 ASB2Q96Q27 587 aa26.9■■□□□ 1.9
SMARCD1-209ENST00000550477 GTPBP6O43824 516 aaPredicted RBP26.89■■□□□ 1.9
SMARCD1-209ENST00000550477 EIF3JO75822 258 aaKnown RBP26.89■■□□□ 1.9
SMARCD1-209ENST00000550477 PARNO95453 639 aaKnown RBP26.89■■□□□ 1.9
SMARCD1-209ENST00000550477 TRAF1Q13077 416 aa26.89■■□□□ 1.9
SMARCD1-209ENST00000550477 DGKDQ16760 1214 aa26.89■■□□□ 1.9
SMARCD1-209ENST00000550477 LY6KQ17RY6 165 aa26.89■■□□□ 1.9
SMARCD1-209ENST00000550477 IFIT1BQ5T764 474 aaKnown RBP26.89■■□□□ 1.9
SMARCD1-209ENST00000550477 CCDC62Q6P9F0 684 aa26.89■■□□□ 1.9
SMARCD1-209ENST00000550477 KATNAL1Q9BW62 490 aa26.89■■□□□ 1.9
SMARCD1-209ENST00000550477 AMNQ9BXJ7 453 aa26.89■■□□□ 1.9
SMARCD1-209ENST00000550477 MAP3K20Q9NYL2 800 aaKnown RBP26.89■■□□□ 1.9
SMARCD1-209ENST00000550477 MYH6P13533 1939 aa26.88■■□□□ 1.89
SMARCD1-209ENST00000550477 EYSQ5T1H1 3165 aa26.88■■□□□ 1.89
SMARCD1-209ENST00000550477 ARIH2O95376 493 aa26.88■■□□□ 1.89
SMARCD1-209ENST00000550477 MMP3P08254 477 aa26.88■■□□□ 1.89
SMARCD1-209ENST00000550477 TRDNQ13061 729 aa26.88■■□□□ 1.89
SMARCD1-209ENST00000550477 CHST3Q7LGC8 479 aa26.88■■□□□ 1.89
SMARCD1-209ENST00000550477 TBC1D5Q92609 795 aa26.88■■□□□ 1.89
SMARCD1-209ENST00000550477 BAIAP3O94812 1187 aa26.87■■□□□ 1.89
SMARCD1-209ENST00000550477 CFBP00751 764 aa26.87■■□□□ 1.89
SMARCD1-209ENST00000550477 MYOGP15173 224 aa26.87■■□□□ 1.89
SMARCD1-209ENST00000550477 KCNJ6P48051 423 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms