RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 KLHL6Q8WZ60 621 aa4.61□□□□□ -1.67
CCNT1-203ENST00000550457 RNF34Q969K3 372 aa4.61□□□□□ -1.67
CCNT1-203ENST00000550457 ZBTB8AQ96BR9 441 aa4.61□□□□□ -1.67
CCNT1-203ENST00000550457 DDX11Q96FC9 970 aa4.61□□□□□ -1.67
CCNT1-203ENST00000550457 NTMQ9P121 344 aa4.61□□□□□ -1.67
CCNT1-203ENST00000550457 BACE2Q9Y5Z0 518 aa4.61□□□□□ -1.67
CCNT1-203ENST00000550457 TNIKQ9UKE5 1360 aa4.61□□□□□ -1.67
CCNT1-203ENST00000550457 A0A1W2PQH9 124 aa4.6□□□□□ -1.67
CCNT1-203ENST00000550457 C7orf72A4D263 438 aa4.6□□□□□ -1.67
CCNT1-203ENST00000550457 TNFRSF1AP19438 455 aa4.6□□□□□ -1.67
CCNT1-203ENST00000550457 SEPHS1P49903 392 aa4.6□□□□□ -1.67
CCNT1-203ENST00000550457 ZNF513Q8N8E2 541 aaPredicted RBP4.6□□□□□ -1.67
CCNT1-203ENST00000550457 ADAMTS17Q8TE56 1095 aa4.6□□□□□ -1.67
CCNT1-203ENST00000550457 DPF3Q92784 378 aa4.6□□□□□ -1.67
CCNT1-203ENST00000550457 YTHDC1Q96MU7 727 aaKnown RBP4.6□□□□□ -1.67
CCNT1-203ENST00000550457 GORASP1Q9BQQ3 440 aa4.6□□□□□ -1.67
CCNT1-203ENST00000550457 GBP3Q9H0R5 595 aa4.6□□□□□ -1.67
CCNT1-203ENST00000550457 METTL5Q9NRN9 209 aaKnown RBP4.6□□□□□ -1.67
CCNT1-203ENST00000550457 NUDT5Q9UKK9 219 aa4.6□□□□□ -1.67
CCNT1-203ENST00000550457 NPHP3-ACAD11A0A0J9YXS1 232 aa4.59□□□□□ -1.67
CCNT1-203ENST00000550457 FUCA1P04066 466 aa4.59□□□□□ -1.67
CCNT1-203ENST00000550457 NTRK1P04629 796 aa4.59□□□□□ -1.67
CCNT1-203ENST00000550457 AMPD2Q01433 879 aa4.59□□□□□ -1.67
CCNT1-203ENST00000550457 SLC7A5Q01650 507 aa4.59□□□□□ -1.67
CCNT1-203ENST00000550457 PAK2Q13177 524 aa4.59□□□□□ -1.67
CCNT1-203ENST00000550457 ADAT2Q7Z6V5 191 aaKnown RBP4.59□□□□□ -1.67
CCNT1-203ENST00000550457 FAM9AQ8IZU1 332 aaPredicted RBP4.59□□□□□ -1.67
CCNT1-203ENST00000550457 FAM26EQ8N5C1 309 aa4.59□□□□□ -1.67
CCNT1-203ENST00000550457 PLEKHO2Q8TD55 490 aa4.59□□□□□ -1.67
CCNT1-203ENST00000550457 PHAXQ9H814 394 aaKnown RBP4.59□□□□□ -1.67
CCNT1-203ENST00000550457 SMPD4Q9NXE4 827 aa4.59□□□□□ -1.67
CCNT1-203ENST00000550457 PALD1Q9ULE6 856 aa4.59□□□□□ -1.67
CCNT1-203ENST00000550457 MATN3O15232 486 aa4.58□□□□□ -1.68
CCNT1-203ENST00000550457 PPM1BO75688 479 aa4.58□□□□□ -1.68
CCNT1-203ENST00000550457 ZBTB7AO95365 584 aa4.58□□□□□ -1.68
CCNT1-203ENST00000550457 CYP2C8P10632 490 aa4.58□□□□□ -1.68
CCNT1-203ENST00000550457 PAMP19021 973 aa4.58□□□□□ -1.68
CCNT1-203ENST00000550457 THBS2P35442 1172 aa4.58□□□□□ -1.68
CCNT1-203ENST00000550457 SOX9P48436 509 aa4.58□□□□□ -1.68
CCNT1-203ENST00000550457 GIPRP48546 466 aa4.58□□□□□ -1.68
CCNT1-203ENST00000550457 GRB10Q13322 594 aa4.58□□□□□ -1.68
CCNT1-203ENST00000550457 TBC1D10BQ4KMP7 808 aaPredicted RBP4.58□□□□□ -1.68
CCNT1-203ENST00000550457 C19orf47Q8N9M1 422 aaKnown RBP4.58□□□□□ -1.68
CCNT1-203ENST00000550457 USP33Q8TEY7 942 aa4.58□□□□□ -1.68
CCNT1-203ENST00000550457 RCC1LQ96I51 464 aaKnown RBP4.58□□□□□ -1.68
CCNT1-203ENST00000550457 CRBNQ96SW2 442 aa4.58□□□□□ -1.68
CCNT1-203ENST00000550457 C11orf84Q9BUA3 381 aaPredicted RBP4.58□□□□□ -1.68
CCNT1-203ENST00000550457 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.58□□□□□ -1.68
CCNT1-203ENST00000550457 CLEC1BQ9P126 229 aa4.58□□□□□ -1.68
CCNT1-203ENST00000550457 APEX2Q9UBZ4 518 aa4.58□□□□□ -1.68
CCNT1-203ENST00000550457 EFR3BQ9Y2G0 817 aa4.58□□□□□ -1.68
CCNT1-203ENST00000550457 AKAP8O43823 692 aaKnown RBP4.57□□□□□ -1.68
CCNT1-203ENST00000550457 NPHS1O60500 1241 aa4.57□□□□□ -1.68
CCNT1-203ENST00000550457 PLS3P13797 630 aa4.57□□□□□ -1.68
CCNT1-203ENST00000550457 RPL13P26373 211 aaKnown RBP4.57□□□□□ -1.68
CCNT1-203ENST00000550457 EIF6P56537 245 aaKnown RBP4.57□□□□□ -1.68
CCNT1-203ENST00000550457 COL9A2Q14055 689 aaPredicted RBP4.57□□□□□ -1.68
CCNT1-203ENST00000550457 RGL3Q3MIN7 710 aa4.57□□□□□ -1.68
CCNT1-203ENST00000550457 TTLL7Q6ZT98 887 aa4.57□□□□□ -1.68
CCNT1-203ENST00000550457 COPS5Q92905 334 aa4.57□□□□□ -1.68
CCNT1-203ENST00000550457 SSBP3Q9BWW4 388 aaPredicted RBP4.57□□□□□ -1.68
CCNT1-203ENST00000550457 GPRC5CQ9NQ84 441 aa4.57□□□□□ -1.68
CCNT1-203ENST00000550457 SLC12A7Q9Y666 1083 aa4.57□□□□□ -1.68
CCNT1-203ENST00000550457 CEP162Q5TB80 1403 aa4.56□□□□□ -1.68
CCNT1-203ENST00000550457 SGSM2O43147 1006 aa4.56□□□□□ -1.68
CCNT1-203ENST00000550457 PLATP00750 562 aa4.56□□□□□ -1.68
CCNT1-203ENST00000550457 ZNF20P17024 532 aa4.56□□□□□ -1.68
CCNT1-203ENST00000550457 ZXDAP98168 799 aa4.56□□□□□ -1.68
CCNT1-203ENST00000550457 CYP4F3Q08477 520 aa4.56□□□□□ -1.68
CCNT1-203ENST00000550457 INF2Q27J81 1249 aa4.56□□□□□ -1.68
CCNT1-203ENST00000550457 PRR31Q5SQ13 230 aa4.56□□□□□ -1.68
CCNT1-203ENST00000550457 ETV3LQ6ZN32 361 aa4.56□□□□□ -1.68
CCNT1-203ENST00000550457 STK32CQ86UX6 486 aa4.56□□□□□ -1.68
CCNT1-203ENST00000550457 MIB1Q86YT6 1006 aa4.56□□□□□ -1.68
CCNT1-203ENST00000550457 C8orf49Q96NF6 230 aa4.56□□□□□ -1.68
CCNT1-203ENST00000550457 C1QTNF3Q9BXJ4 246 aa4.56□□□□□ -1.68
CCNT1-203ENST00000550457 MARCH2Q9P0N8 246 aa4.56□□□□□ -1.68
CCNT1-203ENST00000550457 INVSQ9Y283 1065 aa4.56□□□□□ -1.68
CCNT1-203ENST00000550457 TRBV23OR9-2A0A075B6M9 112 aa4.55□□□□□ -1.68
CCNT1-203ENST00000550457 C1QTNF3-AMACRE9PGA6 284 aa4.55□□□□□ -1.68
CCNT1-203ENST00000550457 SMARCA5O60264 1052 aaPredicted RBP4.55□□□□□ -1.68
CCNT1-203ENST00000550457 KCNH1O95259 989 aa4.55□□□□□ -1.68
CCNT1-203ENST00000550457 SCRN1Q12765 414 aa4.55□□□□□ -1.68
CCNT1-203ENST00000550457 C9orf131Q5VYM1 1079 aa4.55□□□□□ -1.68
CCNT1-203ENST00000550457 CPZQ66K79 652 aa4.55□□□□□ -1.68
CCNT1-203ENST00000550457 KIAA1211LQ6NV74 962 aa4.55□□□□□ -1.68
CCNT1-203ENST00000550457 METTL16Q86W50 562 aaKnown RBP4.55□□□□□ -1.68
CCNT1-203ENST00000550457 DCP2Q8IU60 420 aaKnown RBP4.55□□□□□ -1.68
CCNT1-203ENST00000550457 TEX2Q8IWB9 1127 aa4.55□□□□□ -1.68
CCNT1-203ENST00000550457 ZNF654Q8IZM8 581 aa4.55□□□□□ -1.68
CCNT1-203ENST00000550457 KYQ8NBH2 561 aa4.55□□□□□ -1.68
CCNT1-203ENST00000550457 SHDQ96IW2 340 aa4.55□□□□□ -1.68
CCNT1-203ENST00000550457 LOXL4Q96JB6 756 aa4.55□□□□□ -1.68
CCNT1-203ENST00000550457 SAMD11Q96NU1 681 aa4.55□□□□□ -1.68
CCNT1-203ENST00000550457 MMP19Q99542 508 aa4.55□□□□□ -1.68
CCNT1-203ENST00000550457 LGR4Q9BXB1 951 aa4.55□□□□□ -1.68
CCNT1-203ENST00000550457 AKT3Q9Y243 479 aa4.55□□□□□ -1.68
CCNT1-203ENST00000550457 SUGT1Q9Y2Z0 365 aa4.55□□□□□ -1.68
CCNT1-203ENST00000550457 EMC9Q9Y3B6 208 aa4.55□□□□□ -1.68
CCNT1-203ENST00000550457 FANCIQ9NVI1 1328 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms