RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 NAV1Q8NEY1 1877 aa10.02□□□□□ -0.81
SMARCD1-207ENST00000549526 USP17L12C9JPN9 530 aa10.01□□□□□ -0.81
SMARCD1-207ENST00000549526 USP17L21D6R901 530 aa10.01□□□□□ -0.81
SMARCD1-207ENST00000549526 UPP2O95045 317 aa10.01□□□□□ -0.81
SMARCD1-207ENST00000549526 CXCL10P02778 98 aa10.01□□□□□ -0.81
SMARCD1-207ENST00000549526 PTPN11Q06124 597 aaPredicted RBP10.01□□□□□ -0.81
SMARCD1-207ENST00000549526 ALDH1L2Q3SY69 923 aa10.01□□□□□ -0.81
SMARCD1-207ENST00000549526 TAPT1Q6NXT6 567 aa10.01□□□□□ -0.81
SMARCD1-207ENST00000549526 SMRP1Q8NCR6 262 aa10.01□□□□□ -0.81
SMARCD1-207ENST00000549526 HAUS7Q99871 368 aa10.01□□□□□ -0.81
SMARCD1-207ENST00000549526 RAVER2Q9HCJ3 691 aaKnown RBP10.01□□□□□ -0.81
SMARCD1-207ENST00000549526 GOPCQ9HD26 462 aa10.01□□□□□ -0.81
SMARCD1-207ENST00000549526 COPRSQ9NQ92 184 aa10.01□□□□□ -0.81
SMARCD1-207ENST00000549526 CLEC1BQ9P126 229 aa10.01□□□□□ -0.81
SMARCD1-207ENST00000549526 DDX49Q9Y6V7 483 aaKnown RBP10.01□□□□□ -0.81
SMARCD1-207ENST00000549526 MYO10Q9HD67 2058 aa10.01□□□□□ -0.81
SMARCD1-207ENST00000549526 GRM6O15303 877 aa10□□□□□ -0.81
SMARCD1-207ENST00000549526 ZBED4O75132 1171 aa10□□□□□ -0.81
SMARCD1-207ENST00000549526 CT47B1P0C2W7 299 aaPredicted RBP10□□□□□ -0.81
SMARCD1-207ENST00000549526 SDHBP21912 280 aa10□□□□□ -0.81
SMARCD1-207ENST00000549526 CTNNB1P35222 781 aa10□□□□□ -0.81
SMARCD1-207ENST00000549526 CLCN5P51795 746 aa10□□□□□ -0.81
SMARCD1-207ENST00000549526 GABPAQ06546 454 aa10□□□□□ -0.81
SMARCD1-207ENST00000549526 COASYQ13057 564 aa10□□□□□ -0.81
SMARCD1-207ENST00000549526 ANGPT1Q15389 498 aa10□□□□□ -0.81
SMARCD1-207ENST00000549526 BRDTQ58F21 947 aaPredicted RBP10□□□□□ -0.81
SMARCD1-207ENST00000549526 CERS3Q8IU89 383 aa10□□□□□ -0.81
SMARCD1-207ENST00000549526 FBXO16Q8IX29 292 aaPredicted RBP10□□□□□ -0.81
SMARCD1-207ENST00000549526 FAM133AQ8N9E0 248 aa10□□□□□ -0.81
SMARCD1-207ENST00000549526 PRPF38AQ8NAV1 312 aaKnown RBP10□□□□□ -0.81
SMARCD1-207ENST00000549526 CHST13Q8NET6 341 aa10□□□□□ -0.81
SMARCD1-207ENST00000549526 CYP2W1Q8TAV3 490 aa10□□□□□ -0.81
SMARCD1-207ENST00000549526 SLF1Q9BQI6 1058 aa10□□□□□ -0.81
SMARCD1-207ENST00000549526 LMAN2LQ9H0V9 348 aa10□□□□□ -0.81
SMARCD1-207ENST00000549526 HOMER2Q9NSB8 354 aa10□□□□□ -0.81
SMARCD1-207ENST00000549526 SCN10AQ9Y5Y9 1956 aa10□□□□□ -0.81
SMARCD1-207ENST00000549526 RBAK-RBAKDNI3L0D1 243 aa9.99□□□□□ -0.81
SMARCD1-207ENST00000549526 CKBP12277 381 aa9.99□□□□□ -0.81
SMARCD1-207ENST00000549526 EEF2P13639 858 aaKnown RBP9.99□□□□□ -0.81
SMARCD1-207ENST00000549526 ATXN1P54253 815 aaKnown RBP9.99□□□□□ -0.81
SMARCD1-207ENST00000549526 COL9A3Q14050 684 aaPredicted RBP9.99□□□□□ -0.81
SMARCD1-207ENST00000549526 DUSP28Q4G0W2 176 aa9.99□□□□□ -0.81
SMARCD1-207ENST00000549526 UBALD2Q8IYN6 164 aa9.99□□□□□ -0.81
SMARCD1-207ENST00000549526 DCLK2Q8N568 766 aa9.99□□□□□ -0.81
SMARCD1-207ENST00000549526 KREMEN2Q8NCW0 462 aa9.99□□□□□ -0.81
SMARCD1-207ENST00000549526 RUBCNQ92622 972 aa9.99□□□□□ -0.81
SMARCD1-207ENST00000549526 PPP2R3CQ969Q6 453 aa9.99□□□□□ -0.81
SMARCD1-207ENST00000549526 C11orf84Q9BUA3 381 aaPredicted RBP9.99□□□□□ -0.81
SMARCD1-207ENST00000549526 COG6Q9Y2V7 657 aa9.99□□□□□ -0.81
SMARCD1-207ENST00000549526 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.99□□□□□ -0.81
SMARCD1-207ENST00000549526 ATP2A1O14983 1001 aa9.98□□□□□ -0.81
SMARCD1-207ENST00000549526 KPNA6O60684 536 aa9.98□□□□□ -0.81
SMARCD1-207ENST00000549526 CYP2E1P05181 493 aaPredicted RBP9.98□□□□□ -0.81
SMARCD1-207ENST00000549526 RB1P06400 928 aa9.98□□□□□ -0.81
SMARCD1-207ENST00000549526 UBTFL1P0CB47 393 aaPredicted RBP9.98□□□□□ -0.81
SMARCD1-207ENST00000549526 AKR1B1P15121 316 aa9.98□□□□□ -0.81
SMARCD1-207ENST00000549526 EVX2Q03828 476 aa9.98□□□□□ -0.81
SMARCD1-207ENST00000549526 MTMR3Q13615 1198 aa9.98□□□□□ -0.81
SMARCD1-207ENST00000549526 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.98□□□□□ -0.81
SMARCD1-207ENST00000549526 OR6J1Q8NGC5 347 aa9.98□□□□□ -0.81
SMARCD1-207ENST00000549526 NUP88Q99567 741 aaPredicted RBP9.98□□□□□ -0.81
SMARCD1-207ENST00000549526 WDR11Q9BZH6 1224 aa9.98□□□□□ -0.81
SMARCD1-207ENST00000549526 MCM9Q9NXL9 1143 aa9.98□□□□□ -0.81
SMARCD1-207ENST00000549526 NOB1Q9ULX3 412 aaKnown RBP9.98□□□□□ -0.81
SMARCD1-207ENST00000549526 BARX2Q9UMQ3 279 aaPredicted RBP9.98□□□□□ -0.81
SMARCD1-207ENST00000549526 LGR5O75473 907 aa9.97□□□□□ -0.81
SMARCD1-207ENST00000549526 ATF7P17544 494 aaPredicted RBP9.97□□□□□ -0.81
SMARCD1-207ENST00000549526 SP100P23497 879 aaPredicted RBP9.97□□□□□ -0.81
SMARCD1-207ENST00000549526 BMPR1AP36894 532 aa9.97□□□□□ -0.81
SMARCD1-207ENST00000549526 RARSP54136 660 aaKnown RBP9.97□□□□□ -0.81
SMARCD1-207ENST00000549526 TTC39AQ5SRH9 613 aa9.97□□□□□ -0.81
SMARCD1-207ENST00000549526 GDF6Q6KF10 455 aaPredicted RBP9.97□□□□□ -0.81
SMARCD1-207ENST00000549526 FIBCD1Q8N539 461 aa9.97□□□□□ -0.81
SMARCD1-207ENST00000549526 EFHBQ8N7U6 833 aa9.97□□□□□ -0.81
SMARCD1-207ENST00000549526 FLCNQ8NFG4 579 aa9.97□□□□□ -0.81
SMARCD1-207ENST00000549526 TOP1MTQ969P6 601 aa9.97□□□□□ -0.81
SMARCD1-207ENST00000549526 KIFC2Q96AC6 838 aa9.97□□□□□ -0.81
SMARCD1-207ENST00000549526 VTA1Q9NP79 307 aa9.97□□□□□ -0.81
SMARCD1-207ENST00000549526 SWAP70Q9UH65 585 aa9.97□□□□□ -0.81
SMARCD1-207ENST00000549526 SORCS3Q9UPU3 1222 aa9.97□□□□□ -0.81
SMARCD1-207ENST00000549526 R4GN57 208 aa9.97□□□□□ -0.81
SMARCD1-207ENST00000549526 GPR179Q6PRD1 2367 aa9.96□□□□□ -0.81
SMARCD1-207ENST00000549526 DCDC2BA2VCK2 349 aa9.96□□□□□ -0.82
SMARCD1-207ENST00000549526 C5orf67F2Z3F1 127 aa9.96□□□□□ -0.82
SMARCD1-207ENST00000549526 IGSF3O75054 1194 aa9.96□□□□□ -0.82
SMARCD1-207ENST00000549526 IDH1O75874 414 aaKnown RBP9.96□□□□□ -0.82
SMARCD1-207ENST00000549526 BRD1O95696 1058 aa9.96□□□□□ -0.82
SMARCD1-207ENST00000549526 ADRB1P08588 477 aa9.96□□□□□ -0.82
SMARCD1-207ENST00000549526 DMWDQ09019 674 aa9.96□□□□□ -0.82
SMARCD1-207ENST00000549526 CCDC158Q5M9N0 1113 aa9.96□□□□□ -0.82
SMARCD1-207ENST00000549526 RBM23Q86U06 439 aaKnown RBP9.96□□□□□ -0.82
SMARCD1-207ENST00000549526 DBF4BQ8NFT6 615 aa9.96□□□□□ -0.82
SMARCD1-207ENST00000549526 DHX38Q92620 1227 aaKnown RBP9.96□□□□□ -0.82
SMARCD1-207ENST00000549526 IL17RAQ96F46 866 aa9.96□□□□□ -0.82
SMARCD1-207ENST00000549526 DYNLL2Q96FJ2 89 aa9.96□□□□□ -0.82
SMARCD1-207ENST00000549526 CCDC17Q96LX7 622 aa9.96□□□□□ -0.82
SMARCD1-207ENST00000549526 API5Q9BZZ5 524 aaKnown RBP9.96□□□□□ -0.82
SMARCD1-207ENST00000549526 KANSL2Q9H9L4 492 aa9.96□□□□□ -0.82
SMARCD1-207ENST00000549526 PIH1D3Q9NQM4 214 aaKnown RBP9.96□□□□□ -0.82
SMARCD1-207ENST00000549526 RAD50Q92878 1312 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms