RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 FAM76AQ8TAV0 307 aa15.71■□□□□ 0.11
CACNB3-209ENST00000548860 SHTN1A0MZ66 631 aa15.71■□□□□ 0.1
CACNB3-209ENST00000548860 GJC1P36383 396 aa15.71■□□□□ 0.1
CACNB3-209ENST00000548860 CCDC174Q6PII3 467 aa15.71■□□□□ 0.1
CACNB3-209ENST00000548860 TBC1D5Q92609 795 aa15.71■□□□□ 0.1
CACNB3-209ENST00000548860 LARP4BQ92615 738 aaKnown RBP15.71■□□□□ 0.1
CACNB3-209ENST00000548860 PSTPIP2Q9H939 334 aa15.71■□□□□ 0.1
CACNB3-209ENST00000548860 HOMER2Q9NSB8 354 aa15.71■□□□□ 0.1
CACNB3-209ENST00000548860 KCNK3O14649 394 aa15.7■□□□□ 0.1
CACNB3-209ENST00000548860 CCT5P48643 541 aa15.7■□□□□ 0.1
CACNB3-209ENST00000548860 SPDYE3A6NKU9 549 aa15.7■□□□□ 0.1
CACNB3-209ENST00000548860 LIG3P49916 1009 aa15.7■□□□□ 0.1
CACNB3-209ENST00000548860 IL17AQ16552 155 aa15.7■□□□□ 0.1
CACNB3-209ENST00000548860 WHAMMP3Q1A5X7 153 aa15.7■□□□□ 0.1
CACNB3-209ENST00000548860 DDX25Q9UHL0 483 aaKnown RBP15.7■□□□□ 0.1
CACNB3-209ENST00000548860 LRRC53A6NM62 1247 aa15.7■□□□□ 0.1
CACNB3-209ENST00000548860 GCNT3O95395 438 aa15.7■□□□□ 0.1
CACNB3-209ENST00000548860 CFAP58Q5T655 872 aa15.7■□□□□ 0.1
CACNB3-209ENST00000548860 TPH2Q8IWU9 490 aa15.7■□□□□ 0.1
CACNB3-209ENST00000548860 GLIS3Q8NEA6 775 aa15.7■□□□□ 0.1
CACNB3-209ENST00000548860 CTNNBL1Q8WYA6 563 aaPredicted RBP15.7■□□□□ 0.1
CACNB3-209ENST00000548860 DDX12PQ92771 950 aa15.7■□□□□ 0.1
CACNB3-209ENST00000548860 KRT12Q99456 494 aa15.7■□□□□ 0.1
CACNB3-209ENST00000548860 PANK4Q9NVE7 773 aa15.7■□□□□ 0.1
CACNB3-209ENST00000548860 BACH1O14867 736 aa15.69■□□□□ 0.1
CACNB3-209ENST00000548860 TRIM14Q14142 442 aa15.69■□□□□ 0.1
CACNB3-209ENST00000548860 CCDC25Q86WR0 208 aa15.69■□□□□ 0.1
CACNB3-209ENST00000548860 UBLCP1Q8WVY7 318 aaPredicted RBP15.69■□□□□ 0.1
CACNB3-209ENST00000548860 NDST4Q9H3R1 872 aa15.69■□□□□ 0.1
CACNB3-209ENST00000548860 LGALS16A8MUM7 142 aa15.69■□□□□ 0.1
CACNB3-209ENST00000548860 KRT13P13646 458 aa15.69■□□□□ 0.1
CACNB3-209ENST00000548860 MYOCDQ8IZQ8 938 aa15.69■□□□□ 0.1
CACNB3-209ENST00000548860 CPXCR1Q8N123 301 aa15.69■□□□□ 0.1
CACNB3-209ENST00000548860 DPH5Q9H2P9 285 aa15.69■□□□□ 0.1
CACNB3-209ENST00000548860 PCDHA1Q9Y5I3 950 aa15.69■□□□□ 0.1
CACNB3-209ENST00000548860 CCNE1P24864 410 aa15.69■□□□□ 0.1
CACNB3-209ENST00000548860 CYP2J2P51589 502 aa15.69■□□□□ 0.1
CACNB3-209ENST00000548860 KIF11P52732 1056 aa15.69■□□□□ 0.1
CACNB3-209ENST00000548860 MRPL12P52815 198 aaKnown RBP15.69■□□□□ 0.1
CACNB3-209ENST00000548860 FAM26FQ5R3K3 315 aa15.69■□□□□ 0.1
CACNB3-209ENST00000548860 CACNA1FO60840 1977 aa15.68■□□□□ 0.1
CACNB3-209ENST00000548860 MARF1Q9Y4F3 1742 aaKnown RBP15.68■□□□□ 0.1
CACNB3-209ENST00000548860 USP17L10C9JJH3 530 aa15.68■□□□□ 0.1
CACNB3-209ENST00000548860 VAV2P52735 878 aa15.68■□□□□ 0.1
CACNB3-209ENST00000548860 CCDC51Q96ER9 411 aa15.68■□□□□ 0.1
CACNB3-209ENST00000548860 AP1M1Q9BXS5 423 aa15.68■□□□□ 0.1
CACNB3-209ENST00000548860 LRRC37A3O60309 1634 aa15.68■□□□□ 0.1
CACNB3-209ENST00000548860 ECM2O94769 699 aaPredicted RBP15.68■□□□□ 0.1
CACNB3-209ENST00000548860 ADAM9Q13443 819 aa15.68■□□□□ 0.1
CACNB3-209ENST00000548860 C12orf60Q5U649 245 aa15.68■□□□□ 0.1
CACNB3-209ENST00000548860 GPATCH11Q8N954 259 aa15.68■□□□□ 0.1
CACNB3-209ENST00000548860 SHISA4Q96DD7 197 aa15.68■□□□□ 0.1
CACNB3-209ENST00000548860 MTRQ99707 1265 aa15.68■□□□□ 0.1
CACNB3-209ENST00000548860 FUT8Q9BYC5 575 aa15.68■□□□□ 0.1
CACNB3-209ENST00000548860 IL17RBQ9NRM6 502 aa15.68■□□□□ 0.1
CACNB3-209ENST00000548860 THRAP3Q9Y2W1 955 aaKnown RBP15.68■□□□□ 0.1
CACNB3-209ENST00000548860 CAMTA1Q9Y6Y1 1673 aa15.68■□□□□ 0.1
CACNB3-209ENST00000548860 AKR1B1P15121 316 aa15.68■□□□□ 0.1
CACNB3-209ENST00000548860 GGCXP38435 758 aa15.68■□□□□ 0.1
CACNB3-209ENST00000548860 SLC9C1Q4G0N8 1177 aa15.68■□□□□ 0.1
CACNB3-209ENST00000548860 RASSF4Q9H2L5 321 aa15.68■□□□□ 0.1
CACNB3-209ENST00000548860 EPB41L5Q9HCM4 733 aa15.68■□□□□ 0.1
CACNB3-209ENST00000548860 POTEB3A0JP26 581 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 POTECB2RU33 542 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 PRPF6O94906 941 aaKnown RBP15.67■□□□□ 0.1
CACNB3-209ENST00000548860 GNGT1P63211 74 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 SFMBT2Q5VUG0 894 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 FOXR1Q6PIV2 292 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 POTEBQ6S5H4 581 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 NOX5Q96PH1 765 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 PPANQ9NQ55 473 aaKnown RBP15.67■□□□□ 0.1
CACNB3-209ENST00000548860 NDUFAB1O14561 156 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 SARSP49591 514 aaKnown RBP15.67■□□□□ 0.1
CACNB3-209ENST00000548860 CCDC93Q567U6 631 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 PHLDB2Q86SQ0 1253 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 SH2D3CQ8N5H7 860 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 BCAS4Q8TDM0 211 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 PIGOQ8TEQ8 1089 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 TMEM139Q8IV31 216 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 CCDC65Q8IXS2 484 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 ADSSL1Q8N142 457 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 COG1Q8WTW3 980 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 LRRC1Q9BTT6 524 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 TRIM9Q9C026 710 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 PCDHA13Q9Y5I0 950 aa15.67■□□□□ 0.1
CACNB3-209ENST00000548860 SLF2Q8IX21 1173 aa15.66■□□□□ 0.1
CACNB3-209ENST00000548860 CYTH3O43739 400 aa15.66■□□□□ 0.1
CACNB3-209ENST00000548860 GPSM2P81274 684 aa15.66■□□□□ 0.1
CACNB3-209ENST00000548860 U2AF1L4Q8WU68 220 aaKnown RBP15.66■□□□□ 0.1
CACNB3-209ENST00000548860 CD209Q9NNX6 404 aa15.66■□□□□ 0.1
CACNB3-209ENST00000548860 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.66■□□□□ 0.1
CACNB3-209ENST00000548860 NFU1Q9UMS0 254 aa15.66■□□□□ 0.1
CACNB3-209ENST00000548860 CETN3O15182 167 aa15.66■□□□□ 0.1
CACNB3-209ENST00000548860 LRRN2O75325 713 aa15.66■□□□□ 0.1
CACNB3-209ENST00000548860 NUDT12Q9BQG2 462 aa15.66■□□□□ 0.1
CACNB3-209ENST00000548860 USP21Q9UK80 565 aa15.66■□□□□ 0.1
CACNB3-209ENST00000548860 POTEFA5A3E0 1075 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 MYMKA6NI61 221 aa15.65■□□□□ 0.1
CACNB3-209ENST00000548860 LRRIQ3A6PVS8 624 aaPredicted RBP15.65■□□□□ 0.1
CACNB3-209ENST00000548860 POTEIP0CG38 1075 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms