RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 SLC17A8Q8NDX2 589 aa24.97■■□□□ 1.59
USP44-204ENST00000547951 IFIT3O14879 490 aaKnown RBP24.96■■□□□ 1.59
USP44-204ENST00000547951 TRDNQ13061 729 aa24.96■■□□□ 1.59
USP44-204ENST00000547951 SCFD2Q8WU76 684 aa24.96■■□□□ 1.59
USP44-204ENST00000547951 MTMR8Q96EF0 704 aa24.96■■□□□ 1.59
USP44-204ENST00000547951 SEMA6BQ9H3T3 888 aa24.96■■□□□ 1.59
USP44-204ENST00000547951 UNC80Q8N2C7 3258 aa24.96■■□□□ 1.59
USP44-204ENST00000547951 TXNP10599 105 aaKnown RBP24.95■■□□□ 1.58
USP44-204ENST00000547951 PPIGQ13427 754 aaKnown RBP eCLIP24.95■■□□□ 1.58
USP44-204ENST00000547951 GRM4Q14833 912 aa24.95■■□□□ 1.58
USP44-204ENST00000547951 MAP4K1Q92918 833 aa24.95■■□□□ 1.58
USP44-204ENST00000547951 RMDN3Q96TC7 470 aa24.95■■□□□ 1.58
USP44-204ENST00000547951 NOC4LQ9BVI4 516 aaKnown RBP24.95■■□□□ 1.58
USP44-204ENST00000547951 ALDH8A1Q9H2A2 487 aaPredicted RBP24.95■■□□□ 1.58
USP44-204ENST00000547951 HIPK3Q9H422 1215 aa24.95■■□□□ 1.58
USP44-204ENST00000547951 GPHNQ9NQX3 736 aaPredicted RBP24.95■■□□□ 1.58
USP44-204ENST00000547951 TRMT13Q9NUP7 481 aaKnown RBP24.95■■□□□ 1.58
USP44-204ENST00000547951 MRPL11Q9Y3B7 192 aaKnown RBP24.95■■□□□ 1.58
USP44-204ENST00000547951 RBM8AQ9Y5S9 174 aaKnown RBP24.95■■□□□ 1.58
USP44-204ENST00000547951 CFBP00751 764 aa24.94■■□□□ 1.58
USP44-204ENST00000547951 EIF2AK2P19525 551 aaKnown RBP24.94■■□□□ 1.58
USP44-204ENST00000547951 CPT1AP50416 773 aa24.94■■□□□ 1.58
USP44-204ENST00000547951 CCL23P55773 120 aa24.94■■□□□ 1.58
USP44-204ENST00000547951 CCDC62Q6P9F0 684 aa24.94■■□□□ 1.58
USP44-204ENST00000547951 SEPT14Q6ZU15 432 aa24.94■■□□□ 1.58
USP44-204ENST00000547951 ZNF365Q70YC5 407 aa24.94■■□□□ 1.58
USP44-204ENST00000547951 MPHOSPH6Q99547 160 aaKnown RBP24.94■■□□□ 1.58
USP44-204ENST00000547951 CDX2Q99626 313 aaPredicted RBP24.94■■□□□ 1.58
USP44-204ENST00000547951 WNT8AQ9H1J5 351 aa24.94■■□□□ 1.58
USP44-204ENST00000547951 POLR3EQ9NVU0 708 aa24.94■■□□□ 1.58
USP44-204ENST00000547951 GRXCR1A8MXD5 290 aa24.93■■□□□ 1.58
USP44-204ENST00000547951 CYTH3O43739 400 aa24.93■■□□□ 1.58
USP44-204ENST00000547951 LY6KQ17RY6 165 aa24.93■■□□□ 1.58
USP44-204ENST00000547951 RALYLQ86SE5 291 aaKnown RBP24.93■■□□□ 1.58
USP44-204ENST00000547951 HOMER1Q86YM7 354 aa24.93■■□□□ 1.58
USP44-204ENST00000547951 MCF2L2Q86YR7 1114 aa24.93■■□□□ 1.58
USP44-204ENST00000547951 MB21D2Q8IYB1 491 aaPredicted RBP24.93■■□□□ 1.58
USP44-204ENST00000547951 TMEM199Q8N511 208 aa24.93■■□□□ 1.58
USP44-204ENST00000547951 NSUN6Q8TEA1 469 aaKnown RBP24.93■■□□□ 1.58
USP44-204ENST00000547951 PIGSQ96S52 555 aa24.93■■□□□ 1.58
USP44-204ENST00000547951 MTG1Q9BT17 334 aaPredicted RBP24.93■■□□□ 1.58
USP44-204ENST00000547951 AMNQ9BXJ7 453 aa24.93■■□□□ 1.58
USP44-204ENST00000547951 CHD9Q3L8U1 2897 aa24.92■■□□□ 1.58
USP44-204ENST00000547951 A6NJR5 290 aa24.92■■□□□ 1.58
USP44-204ENST00000547951 ZBTB5O15062 677 aa24.92■■□□□ 1.58
USP44-204ENST00000547951 NKRFO15226 690 aaKnown RBP eCLIP24.92■■□□□ 1.58
USP44-204ENST00000547951 CYP2C9P11712 490 aa24.92■■□□□ 1.58
USP44-204ENST00000547951 TROAPQ12815 778 aa24.92■■□□□ 1.58
USP44-204ENST00000547951 TTLL4Q14679 1199 aa24.92■■□□□ 1.58
USP44-204ENST00000547951 WTAPQ15007 396 aa24.92■■□□□ 1.58
USP44-204ENST00000547951 NBPF20Q3BBV1 942 aa24.92■■□□□ 1.58
USP44-204ENST00000547951 RASIP1Q5U651 963 aa24.92■■□□□ 1.58
USP44-204ENST00000547951 NCOA7Q8NI08 942 aa24.92■■□□□ 1.58
USP44-204ENST00000547951 VWCEQ96DN2 955 aa24.92■■□□□ 1.58
USP44-204ENST00000547951 HOXA13P31271 388 aaPredicted RBP24.91■■□□□ 1.58
USP44-204ENST00000547951 HSD17B4P51659 736 aa24.91■■□□□ 1.58
USP44-204ENST00000547951 TMEM67Q5HYA8 995 aa24.91■■□□□ 1.58
USP44-204ENST00000547951 ARHGEF16Q5VV41 709 aa24.91■■□□□ 1.58
USP44-204ENST00000547951 IGDCC4Q8TDY8 1250 aa24.91■■□□□ 1.58
USP44-204ENST00000547951 LSG1Q9H089 658 aaKnown RBP24.91■■□□□ 1.58
USP44-204ENST00000547951 IL23AQ9NPF7 189 aa24.91■■□□□ 1.58
USP44-204ENST00000547951 PXMP2Q9NR77 195 aa24.91■■□□□ 1.58
USP44-204ENST00000547951 PCDHA1Q9Y5I3 950 aa24.91■■□□□ 1.58
USP44-204ENST00000547951 SCN5AQ14524 2016 aa24.91■■□□□ 1.58
USP44-204ENST00000547951 CUL9Q8IWT3 2517 aa24.9■■□□□ 1.58
USP44-204ENST00000547951 PBX2P40425 430 aa24.9■■□□□ 1.58
USP44-204ENST00000547951 ARHGAP1Q07960 439 aa24.9■■□□□ 1.58
USP44-204ENST00000547951 IL31RAQ8NI17 732 aa24.9■■□□□ 1.58
USP44-204ENST00000547951 AFG1LQ8WV93 481 aa24.9■■□□□ 1.58
USP44-204ENST00000547951 MYLIPQ8WY64 445 aa24.9■■□□□ 1.58
USP44-204ENST00000547951 SCLYQ96I15 445 aa24.9■■□□□ 1.58
USP44-204ENST00000547951 MYL10Q9BUA6 226 aa24.9■■□□□ 1.58
USP44-204ENST00000547951 MAF1Q9H063 256 aa24.9■■□□□ 1.58
USP44-204ENST00000547951 RIOX1Q9H6W3 641 aa24.9■■□□□ 1.58
USP44-204ENST00000547951 CXXC1Q9P0U4 656 aaPredicted RBP24.9■■□□□ 1.58
USP44-204ENST00000547951 PRUNE2Q8WUY3 3088 aa24.89■■□□□ 1.58
USP44-204ENST00000547951 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.89■■□□□ 1.58
USP44-204ENST00000547951 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.89■■□□□ 1.58
USP44-204ENST00000547951 B4DLN1 442 aa24.89■■□□□ 1.58
USP44-204ENST00000547951 RBAK-RBAKDNI3L0D1 243 aa24.89■■□□□ 1.58
USP44-204ENST00000547951 NR3C2P08235 984 aa24.89■■□□□ 1.58
USP44-204ENST00000547951 DNAJB2P25686 324 aa24.89■■□□□ 1.58
USP44-204ENST00000547951 MRPL12P52815 198 aaKnown RBP24.89■■□□□ 1.58
USP44-204ENST00000547951 GHRHRQ02643 423 aa24.89■■□□□ 1.58
USP44-204ENST00000547951 STXBP2Q15833 593 aa24.89■■□□□ 1.58
USP44-204ENST00000547951 FAM47CQ5HY64 1035 aa24.89■■□□□ 1.58
USP44-204ENST00000547951 PIBF1Q8WXW3 757 aa24.89■■□□□ 1.58
USP44-204ENST00000547951 ZFP91Q96JP5 570 aaPredicted RBP24.89■■□□□ 1.58
USP44-204ENST00000547951 IWS1Q96ST2 819 aa24.89■■□□□ 1.58
USP44-204ENST00000547951 GBF1Q92538 1859 aa24.89■■□□□ 1.57
USP44-204ENST00000547951 MYH7BA7E2Y1 1941 aa24.88■■□□□ 1.57
USP44-204ENST00000547951 ERICH2A1L162 156 aa24.88■■□□□ 1.57
USP44-204ENST00000547951 CHMP4BP1P59074 171 aa24.88■■□□□ 1.57
USP44-204ENST00000547951 ESYT1Q9BSJ8 1104 aa24.88■■□□□ 1.57
USP44-204ENST00000547951 SEZ6LQ9BYH1 1024 aa24.88■■□□□ 1.57
USP44-204ENST00000547951 LY9Q9HBG7 655 aa24.88■■□□□ 1.57
USP44-204ENST00000547951 RGS20O76081 388 aa24.87■■□□□ 1.57
USP44-204ENST00000547951 MMP3P08254 477 aa24.87■■□□□ 1.57
USP44-204ENST00000547951 PSRC1Q6PGN9 363 aaPredicted RBP24.87■■□□□ 1.57
USP44-204ENST00000547951 SLC27A2O14975 620 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms