RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 LMCD1Q9NZU5 365 aa6.14□□□□□ -1.43
CBX5-203ENST00000547872 GPRASP1Q5JY77 1395 aa6.14□□□□□ -1.43
CBX5-203ENST00000547872 SSH2Q76I76 1423 aa6.14□□□□□ -1.43
CBX5-203ENST00000547872 RGPD3A6NKT7 1758 aaPredicted RBP6.13□□□□□ -1.43
CBX5-203ENST00000547872 RGPD4Q7Z3J3 1758 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 WASH4PA8MWX3 477 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 C9IYK1 514 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 SMAD7O15105 426 aaKnown RBP6.13□□□□□ -1.43
CBX5-203ENST00000547872 HSPA6P17066 643 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 IRAK1P51617 712 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 CASP7P55210 303 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 SNW1Q13573 536 aaKnown RBP6.13□□□□□ -1.43
CBX5-203ENST00000547872 AUHQ13825 339 aaKnown RBP6.13□□□□□ -1.43
CBX5-203ENST00000547872 ZNF792Q3KQV3 632 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 GNPTABQ3T906 1256 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 SLC23A3Q6PIS1 610 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 TMC3Q7Z5M5 1100 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 PPFIBP1Q86W92 1011 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 MCF2L2Q86YR7 1114 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 C7orf61Q8IZ16 206 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 NGDNQ8NEJ9 315 aaKnown RBP6.13□□□□□ -1.43
CBX5-203ENST00000547872 NLGN2Q8NFZ4 835 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 ENOX1Q8TC92 643 aaKnown RBP6.13□□□□□ -1.43
CBX5-203ENST00000547872 SYTL4Q96C24 671 aaPredicted RBP6.13□□□□□ -1.43
CBX5-203ENST00000547872 PRDM14Q9GZV8 571 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 PRDM7Q9NQW5 492 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 ZNF214Q9UL59 606 aaPredicted RBP6.13□□□□□ -1.43
CBX5-203ENST00000547872 R3HCC1Q9Y3T6 440 aaKnown RBP6.13□□□□□ -1.43
CBX5-203ENST00000547872 LTBP3Q9NS15 1303 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 OVOS2A0A0G2JMS6 1433 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 OVOS2A0A0J9YW53 1432 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 OVOS2Q6IE36 1432 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 PARP4Q9UKK3 1724 aaKnown RBP6.13□□□□□ -1.43
CBX5-203ENST00000547872 SBF2Q86WG5 1849 aa6.13□□□□□ -1.43
CBX5-203ENST00000547872 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
CBX5-203ENST00000547872 SLC7A5Q01650 507 aa6.12□□□□□ -1.43
CBX5-203ENST00000547872 EGR3Q06889 387 aa6.12□□□□□ -1.43
CBX5-203ENST00000547872 GAB4Q2WGN9 574 aa6.12□□□□□ -1.43
CBX5-203ENST00000547872 XP32Q5T750 250 aa6.12□□□□□ -1.43
CBX5-203ENST00000547872 DCAF15Q66K64 600 aa6.12□□□□□ -1.43
CBX5-203ENST00000547872 PRAG1Q86YV5 1406 aa6.12□□□□□ -1.43
CBX5-203ENST00000547872 DAGLBQ8NCG7 672 aa6.12□□□□□ -1.43
CBX5-203ENST00000547872 SYTL5Q8TDW5 730 aaPredicted RBP6.12□□□□□ -1.43
CBX5-203ENST00000547872 PRAM1Q96QH2 718 aa6.12□□□□□ -1.43
CBX5-203ENST00000547872 GMLQ99445 158 aa6.12□□□□□ -1.43
CBX5-203ENST00000547872 DSCC1Q9BVC3 393 aa6.12□□□□□ -1.43
CBX5-203ENST00000547872 HDAC8Q9BY41 377 aa6.12□□□□□ -1.43
CBX5-203ENST00000547872 KRTAP4-6Q9BYQ5 205 aa6.12□□□□□ -1.43
CBX5-203ENST00000547872 MTFR1LQ9H019 292 aa6.12□□□□□ -1.43
CBX5-203ENST00000547872 YTHDC2Q9H6S0 1430 aaKnown RBP6.12□□□□□ -1.43
CBX5-203ENST00000547872 ZNF408Q9H9D4 720 aa6.12□□□□□ -1.43
CBX5-203ENST00000547872 RC3H2Q9HBD1 1191 aaKnown RBP6.12□□□□□ -1.43
CBX5-203ENST00000547872 GFOD1Q9NXC2 390 aa6.12□□□□□ -1.43
CBX5-203ENST00000547872 ACTR10Q9NZ32 417 aa6.12□□□□□ -1.43
CBX5-203ENST00000547872 POGKQ9P215 609 aa6.12□□□□□ -1.43
CBX5-203ENST00000547872 PCDHB10Q9UN67 800 aa6.12□□□□□ -1.43
CBX5-203ENST00000547872 WNK3Q9BYP7 1800 aa6.11□□□□□ -1.43
CBX5-203ENST00000547872 PEAK1Q9H792 1746 aa6.11□□□□□ -1.43
CBX5-203ENST00000547872 UTRNP46939 3433 aa6.11□□□□□ -1.43
CBX5-203ENST00000547872 SSU72P8A0A1W2PR75 194 aa6.11□□□□□ -1.43
CBX5-203ENST00000547872 SIGLEC6O43699 453 aa6.11□□□□□ -1.43
CBX5-203ENST00000547872 PRAMEF1O95521 474 aa6.11□□□□□ -1.43
CBX5-203ENST00000547872 ESR1P03372 595 aa6.11□□□□□ -1.43
CBX5-203ENST00000547872 RNASE1P07998 156 aaKnown RBP6.11□□□□□ -1.43
CBX5-203ENST00000547872 ETFBP38117 255 aa6.11□□□□□ -1.43
CBX5-203ENST00000547872 TCEAL1Q15170 157 aa6.11□□□□□ -1.43
CBX5-203ENST00000547872 NOL9Q5SY16 702 aaKnown RBP6.11□□□□□ -1.43
CBX5-203ENST00000547872 AXDND1Q5T1B0 1012 aaPredicted RBP6.11□□□□□ -1.43
CBX5-203ENST00000547872 TCP11L2Q8N4U5 519 aa6.11□□□□□ -1.43
CBX5-203ENST00000547872 TANGO6Q9C0B7 1094 aa6.11□□□□□ -1.43
CBX5-203ENST00000547872 CHST7Q9NS84 486 aa6.11□□□□□ -1.43
CBX5-203ENST00000547872 PRKAG3Q9UGI9 489 aa6.11□□□□□ -1.43
CBX5-203ENST00000547872 MEIS1O00470 390 aa6.1□□□□□ -1.43
CBX5-203ENST00000547872 ITGA4P13612 1032 aa6.1□□□□□ -1.43
CBX5-203ENST00000547872 HTRA3P83110 453 aa6.1□□□□□ -1.43
CBX5-203ENST00000547872 SLC15A2Q16348 729 aa6.1□□□□□ -1.43
CBX5-203ENST00000547872 TXNRD1Q16881 649 aa6.1□□□□□ -1.43
CBX5-203ENST00000547872 LARP1BQ659C4 914 aaKnown RBP6.1□□□□□ -1.43
CBX5-203ENST00000547872 VHLLQ6RSH7 139 aa6.1□□□□□ -1.43
CBX5-203ENST00000547872 ZNF655Q8N720 491 aaPredicted RBP6.1□□□□□ -1.43
CBX5-203ENST00000547872 TCTN2Q96GX1 697 aa6.1□□□□□ -1.43
CBX5-203ENST00000547872 CCDC120Q96HB5 630 aa6.1□□□□□ -1.43
CBX5-203ENST00000547872 ALPK1Q96QP1 1244 aa6.1□□□□□ -1.43
CBX5-203ENST00000547872 MBNL3Q9NUK0 354 aaKnown RBP6.1□□□□□ -1.43
CBX5-203ENST00000547872 PRR13Q9NZ81 148 aa6.1□□□□□ -1.43
CBX5-203ENST00000547872 SLAMF8Q9P0V8 285 aa6.1□□□□□ -1.43
CBX5-203ENST00000547872 ADGRE2Q9UHX3 823 aa6.1□□□□□ -1.43
CBX5-203ENST00000547872 ADAMTS6Q9UKP5 1117 aa6.1□□□□□ -1.43
CBX5-203ENST00000547872 PCDHA11Q9Y5I1 949 aa6.1□□□□□ -1.43
CBX5-203ENST00000547872 ITSN1Q15811 1721 aa6.09□□□□□ -1.43
CBX5-203ENST00000547872 STK10O94804 968 aaKnown RBP6.09□□□□□ -1.43
CBX5-203ENST00000547872 YBX3P16989 372 aaKnown RBP eCLIP6.09□□□□□ -1.43
CBX5-203ENST00000547872 POLD1P28340 1107 aa6.09□□□□□ -1.43
CBX5-203ENST00000547872 PCBP3P57721 371 aaKnown RBP6.09□□□□□ -1.43
CBX5-203ENST00000547872 DDB1Q16531 1140 aa6.09□□□□□ -1.43
CBX5-203ENST00000547872 ANKRD39Q53RE8 183 aa6.09□□□□□ -1.43
CBX5-203ENST00000547872 HEATR6Q6AI08 1181 aaKnown RBP6.09□□□□□ -1.43
CBX5-203ENST00000547872 KIAA1211LQ6NV74 962 aa6.09□□□□□ -1.43
CBX5-203ENST00000547872 HAUS7Q99871 368 aa6.09□□□□□ -1.43
CBX5-203ENST00000547872 GBP3Q9H0R5 595 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms