RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 CD4P01730 458 aa21.66■■□□□ 1.06
CHMP1A-203ENST00000547614 HSD17B4P51659 736 aa21.66■■□□□ 1.06
CHMP1A-203ENST00000547614 FPGSQ05932 587 aa21.66■■□□□ 1.06
CHMP1A-203ENST00000547614 TTLL4Q14679 1199 aa21.66■■□□□ 1.06
CHMP1A-203ENST00000547614 STXBP2Q15833 593 aa21.66■■□□□ 1.06
CHMP1A-203ENST00000547614 BRDTQ58F21 947 aaPredicted RBP21.66■■□□□ 1.06
CHMP1A-203ENST00000547614 C9orf50Q5SZB4 431 aa21.66■■□□□ 1.06
CHMP1A-203ENST00000547614 GRIN2DO15399 1336 aa21.65■■□□□ 1.06
CHMP1A-203ENST00000547614 OPLAHO14841 1288 aa21.65■■□□□ 1.06
CHMP1A-203ENST00000547614 SLC27A2O14975 620 aa21.65■■□□□ 1.06
CHMP1A-203ENST00000547614 CFBP00751 764 aa21.65■■□□□ 1.06
CHMP1A-203ENST00000547614 TXNP10599 105 aaKnown RBP21.65■■□□□ 1.06
CHMP1A-203ENST00000547614 MCM5P33992 734 aa21.65■■□□□ 1.06
CHMP1A-203ENST00000547614 SLC35G1Q2M3R5 365 aa21.65■■□□□ 1.06
CHMP1A-203ENST00000547614 MFSD5Q6N075 450 aa21.65■■□□□ 1.06
CHMP1A-203ENST00000547614 CASC1Q6TDU7 716 aa21.65■■□□□ 1.06
CHMP1A-203ENST00000547614 OR6J1Q8NGC5 347 aa21.65■■□□□ 1.06
CHMP1A-203ENST00000547614 TMEM87BQ96K49 555 aa21.65■■□□□ 1.06
CHMP1A-203ENST00000547614 LY9Q9HBG7 655 aa21.65■■□□□ 1.06
CHMP1A-203ENST00000547614 ANO2Q9NQ90 1003 aa21.65■■□□□ 1.06
CHMP1A-203ENST00000547614 PNMA6FA0A0J9YX94 578 aa21.64■■□□□ 1.05
CHMP1A-203ENST00000547614 A6NJR5 290 aa21.64■■□□□ 1.05
CHMP1A-203ENST00000547614 PRC1O43663 620 aa21.64■■□□□ 1.05
CHMP1A-203ENST00000547614 CYTH3O43739 400 aa21.64■■□□□ 1.05
CHMP1A-203ENST00000547614 KPNA6O60684 536 aa21.64■■□□□ 1.05
CHMP1A-203ENST00000547614 ARHGEF16Q5VV41 709 aa21.64■■□□□ 1.05
CHMP1A-203ENST00000547614 CREB3L3Q68CJ9 461 aa21.64■■□□□ 1.05
CHMP1A-203ENST00000547614 FAM109BQ6ICB4 259 aaPredicted RBP21.64■■□□□ 1.05
CHMP1A-203ENST00000547614 CCDC62Q6P9F0 684 aa21.64■■□□□ 1.05
CHMP1A-203ENST00000547614 HOMER1Q86YM7 354 aa21.64■■□□□ 1.05
CHMP1A-203ENST00000547614 DEFB123Q8N688 67 aa21.64■■□□□ 1.05
CHMP1A-203ENST00000547614 PIGSQ96S52 555 aa21.64■■□□□ 1.05
CHMP1A-203ENST00000547614 EIF3JO75822 258 aaKnown RBP21.63■■□□□ 1.05
CHMP1A-203ENST00000547614 DDAH1O94760 285 aa21.63■■□□□ 1.05
CHMP1A-203ENST00000547614 SMARCA1P28370 1054 aa21.63■■□□□ 1.05
CHMP1A-203ENST00000547614 EPHB4P54760 987 aa21.63■■□□□ 1.05
CHMP1A-203ENST00000547614 PURAQ00577 322 aaKnown RBP21.63■■□□□ 1.05
CHMP1A-203ENST00000547614 ZNF654Q8IZM8 581 aa21.63■■□□□ 1.05
CHMP1A-203ENST00000547614 GPHNQ9NQX3 736 aaPredicted RBP21.63■■□□□ 1.05
CHMP1A-203ENST00000547614 PXMP2Q9NR77 195 aa21.63■■□□□ 1.05
CHMP1A-203ENST00000547614 NR3C2P08235 984 aa21.62■■□□□ 1.05
CHMP1A-203ENST00000547614 KIF5BP33176 963 aa21.62■■□□□ 1.05
CHMP1A-203ENST00000547614 LIFRP42702 1097 aa21.62■■□□□ 1.05
CHMP1A-203ENST00000547614 RNF20Q5VTR2 975 aa21.62■■□□□ 1.05
CHMP1A-203ENST00000547614 SKAP1Q86WV1 359 aa21.62■■□□□ 1.05
CHMP1A-203ENST00000547614 CTCFLQ8NI51 663 aaPredicted RBP21.62■■□□□ 1.05
CHMP1A-203ENST00000547614 MTG1Q9BT17 334 aaPredicted RBP21.62■■□□□ 1.05
CHMP1A-203ENST00000547614 BAZ2BQ9UIF8 2168 aaKnown RBP21.62■■□□□ 1.05
CHMP1A-203ENST00000547614 ARIH2O95376 493 aa21.61■■□□□ 1.05
CHMP1A-203ENST00000547614 EIF2AK2P19525 551 aaKnown RBP21.61■■□□□ 1.05
CHMP1A-203ENST00000547614 PSMC6P62333 389 aa21.61■■□□□ 1.05
CHMP1A-203ENST00000547614 PPIGQ13427 754 aaKnown RBP eCLIP21.61■■□□□ 1.059e-7■■■□□ 16.3
CHMP1A-203ENST00000547614 SEPT14Q6ZU15 432 aa21.61■■□□□ 1.05
CHMP1A-203ENST00000547614 TMEM199Q8N511 208 aa21.61■■□□□ 1.05
CHMP1A-203ENST00000547614 COPS5Q92905 334 aa21.61■■□□□ 1.05
CHMP1A-203ENST00000547614 LZTS2Q9BRK4 669 aa21.61■■□□□ 1.05
CHMP1A-203ENST00000547614 SPZ1Q9BXG8 430 aa21.61■■□□□ 1.05
CHMP1A-203ENST00000547614 MTMR10Q9NXD2 777 aa21.61■■□□□ 1.05
CHMP1A-203ENST00000547614 GCOM1H8Y6P7 765 aaPredicted RBP21.6■■□□□ 1.05
CHMP1A-203ENST00000547614 SH2B2O14492 632 aaPredicted RBP21.6■■□□□ 1.05
CHMP1A-203ENST00000547614 MYL3P08590 195 aa21.6■■□□□ 1.05
CHMP1A-203ENST00000547614 POLR2MP0CAP2 368 aa21.6■■□□□ 1.05
CHMP1A-203ENST00000547614 GNAQP50148 359 aa21.6■■□□□ 1.05
CHMP1A-203ENST00000547614 SMAD3P84022 425 aaKnown RBP21.6■■□□□ 1.05
CHMP1A-203ENST00000547614 PDCD2LQ9BRP1 358 aa21.6■■□□□ 1.05
CHMP1A-203ENST00000547614 ALDH8A1Q9H2A2 487 aaPredicted RBP21.6■■□□□ 1.05
CHMP1A-203ENST00000547614 LAMA2P24043 3122 aaKnown RBP21.6■■□□□ 1.05
CHMP1A-203ENST00000547614 CCDC69A6NI79 296 aa21.59■■□□□ 1.05
CHMP1A-203ENST00000547614 B4GALT4O60513 344 aa21.59■■□□□ 1.05
CHMP1A-203ENST00000547614 CDC45O75419 566 aa21.59■■□□□ 1.05
CHMP1A-203ENST00000547614 GH1P01241 217 aa21.59■■□□□ 1.05
CHMP1A-203ENST00000547614 SUPT20HL2P0C7V6 817 aa21.59■■□□□ 1.05
CHMP1A-203ENST00000547614 CALM1P0DP23 149 aa21.59■■□□□ 1.05
CHMP1A-203ENST00000547614 CALM2P0DP24 149 aa21.59■■□□□ 1.05
CHMP1A-203ENST00000547614 CALM3P0DP25 149 aa21.59■■□□□ 1.05
CHMP1A-203ENST00000547614 NFXL1Q6ZNB6 911 aa21.59■■□□□ 1.05
CHMP1A-203ENST00000547614 Q7L0L9 218 aa21.59■■□□□ 1.05
CHMP1A-203ENST00000547614 CCDC136Q96JN2 1154 aa21.59■■□□□ 1.05
CHMP1A-203ENST00000547614 RNPC3Q96LT9 517 aaKnown RBP21.59■■□□□ 1.05
CHMP1A-203ENST00000547614 PPP1R12CQ9BZL4 782 aa21.59■■□□□ 1.05
CHMP1A-203ENST00000547614 TRPV6Q9H1D0 765 aa21.59■■□□□ 1.05
CHMP1A-203ENST00000547614 HIPK3Q9H422 1215 aa21.59■■□□□ 1.05
CHMP1A-203ENST00000547614 HOXA13P31271 388 aaPredicted RBP21.58■■□□□ 1.05
CHMP1A-203ENST00000547614 LY6KQ17RY6 165 aa21.58■■□□□ 1.05
CHMP1A-203ENST00000547614 TSGA10IPQ3SY00 556 aa21.58■■□□□ 1.05
CHMP1A-203ENST00000547614 KCNV1Q6PIU1 500 aa21.58■■□□□ 1.05
CHMP1A-203ENST00000547614 VSIG10LQ86VR7 867 aa21.58■■□□□ 1.05
CHMP1A-203ENST00000547614 RRP36Q96EU6 259 aaKnown RBP21.58■■□□□ 1.05
CHMP1A-203ENST00000547614 MYL10Q9BUA6 226 aa21.58■■□□□ 1.05
CHMP1A-203ENST00000547614 DDX41Q9UJV9 622 aaKnown RBP21.58■■□□□ 1.05
CHMP1A-203ENST00000547614 KIAA1217Q5T5P2 1943 aa21.58■■□□□ 1.04
CHMP1A-203ENST00000547614 CSF2RAP15509 400 aa21.57■■□□□ 1.04
CHMP1A-203ENST00000547614 CYP2C18P33260 490 aa21.57■■□□□ 1.04
CHMP1A-203ENST00000547614 PTPN11Q06124 597 aaPredicted RBP21.57■■□□□ 1.04
CHMP1A-203ENST00000547614 ARHGAP1Q07960 439 aa21.57■■□□□ 1.04
CHMP1A-203ENST00000547614 COL9A3Q14050 684 aaPredicted RBP21.57■■□□□ 1.04
CHMP1A-203ENST00000547614 NBPF20Q3BBV1 942 aa21.57■■□□□ 1.04
CHMP1A-203ENST00000547614 NFRKBQ6P4R8 1299 aa21.57■■□□□ 1.04
CHMP1A-203ENST00000547614 C16orf59Q7L2K0 433 aa21.57■■□□□ 1.04
CHMP1A-203ENST00000547614 SGMS1Q86VZ5 419 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms